RNA–Protein interactions for RNA: ENST00000261854.9

SPPL2A-201, Transcript of signal peptide peptidase like 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL2A, Length 7,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2A-201ENST00000261854 CCDC136Q96JN2 1154 aa18.7■□□□□ 0.58
SPPL2A-201ENST00000261854 PPM1GO15355 546 aaPredicted RBP18.7■□□□□ 0.58
SPPL2A-201ENST00000261854 KCNH8Q96L42 1107 aa18.69■□□□□ 0.58
SPPL2A-201ENST00000261854 SENP3-EIF4A1A0A087X0R7 540 aa18.64■□□□□ 0.58
SPPL2A-201ENST00000261854 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
SPPL2A-201ENST00000261854 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
SPPL2A-201ENST00000261854 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
SPPL2A-201ENST00000261854 HIRIP3Q9BW71 556 aaPredicted RBP18.62■□□□□ 0.57
SPPL2A-201ENST00000261854 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
SPPL2A-201ENST00000261854 NCLP19338 710 aaKnown RBP18.6■□□□□ 0.57
SPPL2A-201ENST00000261854 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
SPPL2A-201ENST00000261854 LAS1LQ9Y4W2 734 aaKnown RBP18.58■□□□□ 0.56
SPPL2A-201ENST00000261854 CLSTN1O94985 981 aa18.56■□□□□ 0.56
SPPL2A-201ENST00000261854 ZRSR1Q15695 479 aaKnown RBP18.55■□□□□ 0.56
SPPL2A-201ENST00000261854 MRS2Q9HD23 443 aa18.54■□□□□ 0.56
SPPL2A-201ENST00000261854 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
SPPL2A-201ENST00000261854 DNTTIP2Q5QJE6 756 aaKnown RBP18.53■□□□□ 0.56
SPPL2A-201ENST00000261854 TRIM44Q96DX7 344 aaPredicted RBP18.52■□□□□ 0.56
SPPL2A-201ENST00000261854 ACIN1Q9UKV3 1341 aaKnown RBP18.5■□□□□ 0.55
SPPL2A-201ENST00000261854 TRHP20396 242 aaPredicted RBP18.49■□□□□ 0.55
SPPL2A-201ENST00000261854 PTMAP06454 111 aaKnown RBP18.48■□□□□ 0.55
SPPL2A-201ENST00000261854 PLCB2Q00722 1185 aa18.47■□□□□ 0.55
SPPL2A-201ENST00000261854 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
SPPL2A-201ENST00000261854 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
SPPL2A-201ENST00000261854 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
SPPL2A-201ENST00000261854 RRP7BPQ9NSQ0 103 aa18.45■□□□□ 0.54
SPPL2A-201ENST00000261854 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
SPPL2A-201ENST00000261854 ISY1Q9ULR0 285 aaKnown RBP18.42■□□□□ 0.54
SPPL2A-201ENST00000261854 SCRIBQ14160 1630 aa18.42■□□□□ 0.54
SPPL2A-201ENST00000261854 MTUS2Q5JR59 1369 aa18.41■□□□□ 0.54
SPPL2A-201ENST00000261854 TNNT2P45379 298 aaPredicted RBP18.4■□□□□ 0.54
SPPL2A-201ENST00000261854 FTSJ3Q8IY81 847 aaKnown RBP18.4■□□□□ 0.54
SPPL2A-201ENST00000261854 SOX12O15370 315 aa18.4■□□□□ 0.54
SPPL2A-201ENST00000261854 CASC1Q6TDU7 716 aa18.39■□□□□ 0.53
SPPL2A-201ENST00000261854 OS9Q13438 667 aaPredicted RBP18.38■□□□□ 0.53
SPPL2A-201ENST00000261854 PRM3Q9NNZ6 103 aa18.37■□□□□ 0.53
SPPL2A-201ENST00000261854 FGD1P98174 961 aa18.37■□□□□ 0.53
SPPL2A-201ENST00000261854 BECN1Q14457 450 aa18.36■□□□□ 0.53
SPPL2A-201ENST00000261854 GOLGA6L22H0YM25 854 aa18.35■□□□□ 0.53
SPPL2A-201ENST00000261854 CFAP53Q96M91 514 aa18.34■□□□□ 0.53
SPPL2A-201ENST00000261854 POGKQ9P215 609 aa18.34■□□□□ 0.53
SPPL2A-201ENST00000261854 MLECQ14165 292 aa18.33■□□□□ 0.52
SPPL2A-201ENST00000261854 KCNJ4P48050 445 aa18.3■□□□□ 0.52
SPPL2A-201ENST00000261854 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
SPPL2A-201ENST00000261854 MAPK8IP3Q9UPT6 1336 aa18.27■□□□□ 0.52
SPPL2A-201ENST00000261854 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.51
SPPL2A-201ENST00000261854 RTN4Q9NQC3 1192 aaKnown RBP18.26■□□□□ 0.51
SPPL2A-201ENST00000261854 ANO8Q9HCE9 1232 aaPredicted RBP18.26■□□□□ 0.51
SPPL2A-201ENST00000261854 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
SPPL2A-201ENST00000261854 U2SURPO15042 1029 aaKnown RBP18.24■□□□□ 0.51
SPPL2A-201ENST00000261854 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
SPPL2A-201ENST00000261854 PDE4CQ08493 712 aa18.22■□□□□ 0.51
SPPL2A-201ENST00000261854 DDRGK1Q96HY6 314 aa18.21■□□□□ 0.51
SPPL2A-201ENST00000261854 NAP1L5Q96NT1 182 aaPredicted RBP18.21■□□□□ 0.51
SPPL2A-201ENST00000261854 ZNF330Q9Y3S2 320 aaPredicted RBP18.2■□□□□ 0.5
SPPL2A-201ENST00000261854 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
SPPL2A-201ENST00000261854 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
SPPL2A-201ENST00000261854 CC2D1BQ5T0F9 858 aaKnown RBP18.16■□□□□ 0.5
SPPL2A-201ENST00000261854 RGS3P49796 1198 aa18.15■□□□□ 0.5
SPPL2A-201ENST00000261854 CCDC9Q9Y3X0 531 aaKnown RBP18.15■□□□□ 0.5
SPPL2A-201ENST00000261854 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.15■□□□□ 0.5
SPPL2A-201ENST00000261854 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
SPPL2A-201ENST00000261854 HSP90AB1P08238 724 aaKnown RBP18.14■□□□□ 0.49
SPPL2A-201ENST00000261854 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
SPPL2A-201ENST00000261854 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
SPPL2A-201ENST00000261854 CDCA8Q53HL2 280 aa18.12■□□□□ 0.49
SPPL2A-201ENST00000261854 GOLGA6L6A8MZA4 724 aa18.1■□□□□ 0.49
SPPL2A-201ENST00000261854 CFDP1Q9UEE9 299 aaPredicted RBP18.1■□□□□ 0.49
SPPL2A-201ENST00000261854 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
SPPL2A-201ENST00000261854 MIER1Q8N108 512 aa18.09■□□□□ 0.49
SPPL2A-201ENST00000261854 DRC7Q8IY82 874 aa18.08■□□□□ 0.49
SPPL2A-201ENST00000261854 ANP32EQ9BTT0 268 aa18.08■□□□□ 0.49
SPPL2A-201ENST00000261854 GOLGA6L4A6NEF3 574 aa18.08■□□□□ 0.48
SPPL2A-201ENST00000261854 FBXO3Q9UK99 471 aa18.08■□□□□ 0.48
SPPL2A-201ENST00000261854 GNL2Q13823 731 aaKnown RBP18.08■□□□□ 0.48
SPPL2A-201ENST00000261854 SRPK2P78362 688 aaKnown RBP18.07■□□□□ 0.48
SPPL2A-201ENST00000261854 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
SPPL2A-201ENST00000261854 ERCC6Q03468 1493 aa18.06■□□□□ 0.48
SPPL2A-201ENST00000261854 APBB1O00213 710 aa18.05■□□□□ 0.48
SPPL2A-201ENST00000261854 ARID3AQ99856 593 aa18.05■□□□□ 0.48
SPPL2A-201ENST00000261854 STK26Q9P289 416 aa18.05■□□□□ 0.48
SPPL2A-201ENST00000261854 CSB-PGBD3P0DP91 1061 aa18.04■□□□□ 0.48
SPPL2A-201ENST00000261854 NOC3LQ8WTT2 800 aaKnown RBP18.04■□□□□ 0.48
SPPL2A-201ENST00000261854 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
SPPL2A-201ENST00000261854 G3V3G9 751 aa18.01■□□□□ 0.47
SPPL2A-201ENST00000261854 DCAF8Q5TAQ9 597 aa18.01■□□□□ 0.47
SPPL2A-201ENST00000261854 RTF1Q92541 710 aaKnown RBP18.01■□□□□ 0.47
SPPL2A-201ENST00000261854 ZCCHC6Q5VYS8 1495 aaKnown RBP18■□□□□ 0.47
SPPL2A-201ENST00000261854 NRDCO43847 1150 aa17.98■□□□□ 0.47
SPPL2A-201ENST00000261854 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
SPPL2A-201ENST00000261854 CHMP3Q9Y3E7 222 aa17.97■□□□□ 0.47
SPPL2A-201ENST00000261854 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
SPPL2A-201ENST00000261854 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
SPPL2A-201ENST00000261854 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
SPPL2A-201ENST00000261854 WWC1Q8IX03 1113 aa17.93■□□□□ 0.46
SPPL2A-201ENST00000261854 GGT6Q6P531 493 aa17.92■□□□□ 0.46
SPPL2A-201ENST00000261854 CREBRFQ8IUR6 639 aa17.91■□□□□ 0.46
SPPL2A-201ENST00000261854 CHAF1AQ13111 956 aaPredicted RBP17.91■□□□□ 0.46
SPPL2A-201ENST00000261854 KRI1Q8N9T8 703 aaKnown RBP17.91■□□□□ 0.46
SPPL2A-201ENST00000261854 MCCP23508 829 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms