RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 BAZ1BQ9UIG0 1483 aaKnown RBP21.98■■□□□ 1.11
SREBF1-201ENST00000261646 DEKP35659 375 aaKnown RBP21.95■■□□□ 1.1
SREBF1-201ENST00000261646 KCNH8Q96L42 1107 aa21.94■■□□□ 1.1
SREBF1-201ENST00000261646 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
SREBF1-201ENST00000261646 B4GALNT3Q6L9W6 998 aa21.92■■□□□ 1.1
SREBF1-201ENST00000261646 RTN4Q9NQC3 1192 aaKnown RBP21.92■■□□□ 1.1
SREBF1-201ENST00000261646 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
SREBF1-201ENST00000261646 ZNF777Q9ULD5 760 aaPredicted RBP21.9■■□□□ 1.1
SREBF1-201ENST00000261646 NOP58Q9Y2X3 529 aaKnown RBP21.88■■□□□ 1.09
SREBF1-201ENST00000261646 TMC1Q8TDI8 760 aa21.87■■□□□ 1.09
SREBF1-201ENST00000261646 EIF4G2P78344 907 aaKnown RBP eCLIP21.85■■□□□ 1.096e-7■■■■□ 24.4
SREBF1-201ENST00000261646 SLC4A1APQ9BWU0 796 aaKnown RBP21.82■■□□□ 1.08
SREBF1-201ENST00000261646 RRP7BPQ9NSQ0 103 aa21.82■■□□□ 1.08
SREBF1-201ENST00000261646 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
SREBF1-201ENST00000261646 CCER2I3L3R5 266 aa21.8■■□□□ 1.08
SREBF1-201ENST00000261646 KIF27Q86VH2 1401 aa21.78■■□□□ 1.08
SREBF1-201ENST00000261646 MTUS2Q5JR59 1369 aa21.76■■□□□ 1.07
SREBF1-201ENST00000261646 LAS1LQ9Y4W2 734 aaKnown RBP21.76■■□□□ 1.07
SREBF1-201ENST00000261646 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
SREBF1-201ENST00000261646 CCNB3Q8WWL7 1395 aa21.75■■□□□ 1.07
SREBF1-201ENST00000261646 CANXP27824 592 aaKnown RBP21.73■■□□□ 1.07
SREBF1-201ENST00000261646 RAPGEF2Q9Y4G8 1499 aa21.73■■□□□ 1.07
SREBF1-201ENST00000261646 ARXQ96QS3 562 aa21.72■■□□□ 1.07
SREBF1-201ENST00000261646 NEFMP07197 916 aa21.7■■□□□ 1.06
SREBF1-201ENST00000261646 DHX57Q6P158 1386 aaKnown RBP21.63■■□□□ 1.05
SREBF1-201ENST00000261646 GLIPR1L2Q4G1C9 344 aa21.61■■□□□ 1.05
SREBF1-201ENST00000261646 CUX2O14529 1486 aa21.6■■□□□ 1.05
SREBF1-201ENST00000261646 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
SREBF1-201ENST00000261646 PPM1GO15355 546 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-201ENST00000261646 TIMELESSQ9UNS1 1208 aa21.6■■□□□ 1.05
SREBF1-201ENST00000261646 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.04
SREBF1-201ENST00000261646 RAB3GAP2Q9H2M9 1393 aa21.57■■□□□ 1.04
SREBF1-201ENST00000261646 DDRGK1Q96HY6 314 aa21.55■■□□□ 1.04
SREBF1-201ENST00000261646 KDM2AQ9Y2K7 1162 aa21.55■■□□□ 1.04
SREBF1-201ENST00000261646 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
SREBF1-201ENST00000261646 ERICH6BQ5W0A0 696 aa21.53■■□□□ 1.04
SREBF1-201ENST00000261646 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
SREBF1-201ENST00000261646 SETD5Q9C0A6 1442 aa21.52■■□□□ 1.03
SREBF1-201ENST00000261646 UPF2Q9HAU5 1272 aaKnown RBP21.51■■□□□ 1.03
SREBF1-201ENST00000261646 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
SREBF1-201ENST00000261646 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-201ENST00000261646 FANCIQ9NVI1 1328 aa21.47■■□□□ 1.03
SREBF1-201ENST00000261646 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
SREBF1-201ENST00000261646 FOXD1Q16676 465 aa21.45■■□□□ 1.02
SREBF1-201ENST00000261646 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-201ENST00000261646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.028e-9■■□□□ 11.5
SREBF1-201ENST00000261646 IPO9Q96P70 1041 aaKnown RBP21.41■■□□□ 1.02
SREBF1-201ENST00000261646 HSP90AA1P07900 732 aaKnown RBP21.4■■□□□ 1.02
SREBF1-201ENST00000261646 WDR43Q15061 677 aaKnown RBP eCLIP21.37■■□□□ 1.014e-6■■■□□ 17.4
SREBF1-201ENST00000261646 ANP32BQ92688 251 aaKnown RBP21.37■■□□□ 1.01
SREBF1-201ENST00000261646 RGS3P49796 1198 aa21.35■■□□□ 1.01
SREBF1-201ENST00000261646 TDRD9Q8NDG6 1382 aaKnown RBP21.33■■□□□ 1.01
SREBF1-201ENST00000261646 CHMP7Q8WUX9 453 aaPredicted RBP21.31■■□□□ 1
SREBF1-201ENST00000261646 BECN1Q14457 450 aa21.3■■□□□ 1
SREBF1-201ENST00000261646 FHOD3Q2V2M9 1422 aa21.3■■□□□ 1
SREBF1-201ENST00000261646 RGL3Q3MIN7 710 aa21.3■■□□□ 1
SREBF1-201ENST00000261646 FHAD1B1AJZ9 1412 aa21.3■■□□□ 1
SREBF1-201ENST00000261646 TSPY4P0CV99 314 aa21.26■□□□□ 0.99
SREBF1-201ENST00000261646 TSPY10P0CW01 314 aa21.26■□□□□ 0.99
SREBF1-201ENST00000261646 CARD11Q9BXL7 1154 aa21.26■□□□□ 0.99
SREBF1-201ENST00000261646 NAP1L5Q96NT1 182 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-201ENST00000261646 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-201ENST00000261646 KIF21BO75037 1637 aa21.22■□□□□ 0.99
SREBF1-201ENST00000261646 SYNJ1O43426 1573 aa21.22■□□□□ 0.99
SREBF1-201ENST00000261646 TCERG1O14776 1098 aaKnown RBP21.22■□□□□ 0.99
SREBF1-201ENST00000261646 NUDCQ9Y266 331 aa21.22■□□□□ 0.99
SREBF1-201ENST00000261646 ARHGAP35Q9NRY4 1499 aa21.2■□□□□ 0.98
SREBF1-201ENST00000261646 TRIM44Q96DX7 344 aaPredicted RBP21.19■□□□□ 0.98
SREBF1-201ENST00000261646 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
SREBF1-201ENST00000261646 RCAN3Q9UKA8 241 aa21.17■□□□□ 0.98
SREBF1-201ENST00000261646 MSH5O43196 834 aa21.16■□□□□ 0.98
SREBF1-201ENST00000261646 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-201ENST00000261646 CADPSQ9ULU8 1353 aa21.15■□□□□ 0.98
SREBF1-201ENST00000261646 IGF1RP08069 1367 aa21.15■□□□□ 0.98
SREBF1-201ENST00000261646 ARAP1Q96P48 1450 aa21.14■□□□□ 0.97
SREBF1-201ENST00000261646 PRKRIP1Q9H875 184 aaPredicted RBP21.14■□□□□ 0.97
SREBF1-201ENST00000261646 CHGAP10645 457 aaKnown RBP21.14■□□□□ 0.97
SREBF1-201ENST00000261646 L3MBTL2Q969R5 705 aa21.13■□□□□ 0.97
SREBF1-201ENST00000261646 CC2D1BQ5T0F9 858 aaKnown RBP21.12■□□□□ 0.97
SREBF1-201ENST00000261646 ANO8Q9HCE9 1232 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-201ENST00000261646 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
SREBF1-201ENST00000261646 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
SREBF1-201ENST00000261646 PHLDB1Q86UU1 1377 aa21.09■□□□□ 0.97
SREBF1-201ENST00000261646 ZBED9Q6R2W3 1325 aa21.09■□□□□ 0.97
SREBF1-201ENST00000261646 PAK3O75914 559 aaPredicted RBP21.09■□□□□ 0.97
SREBF1-201ENST00000261646 USP35Q9P2H5 1018 aa21.08■□□□□ 0.96
SREBF1-201ENST00000261646 PDE4AP27815 886 aa21.07■□□□□ 0.96
SREBF1-201ENST00000261646 SLC4A3P48751 1232 aa21.06■□□□□ 0.96
SREBF1-201ENST00000261646 KNSTRNQ9Y448 316 aa21.03■□□□□ 0.96
SREBF1-201ENST00000261646 SLKQ9H2G2 1235 aaPredicted RBP21.02■□□□□ 0.96
SREBF1-201ENST00000261646 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
SREBF1-201ENST00000261646 EXOC6Q8TAG9 804 aa21.01■□□□□ 0.95
SREBF1-201ENST00000261646 DCAF11Q8TEB1 546 aa21.01■□□□□ 0.95
SREBF1-201ENST00000261646 FRAT1Q92837 279 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-201ENST00000261646 GSE1Q14687 1217 aa21■□□□□ 0.95
SREBF1-201ENST00000261646 IL27Q8NEV9 243 aa21■□□□□ 0.95
SREBF1-201ENST00000261646 SPRYD3Q8NCJ5 442 aa21■□□□□ 0.95
SREBF1-201ENST00000261646 PKD2Q13563 968 aa20.99■□□□□ 0.95
SREBF1-201ENST00000261646 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
SREBF1-201ENST00000261646 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms