RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
TRA2B-201ENST00000259043 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
TRA2B-201ENST00000259043 ATMINO43313 823 aaPredicted RBP16.16■□□□□ 0.18
TRA2B-201ENST00000259043 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
TRA2B-201ENST00000259043 SLC39A7Q92504 469 aa16.12■□□□□ 0.17
TRA2B-201ENST00000259043 C7P10643 843 aa16.11■□□□□ 0.17
TRA2B-201ENST00000259043 METRNQ9UJH8 293 aa16.11■□□□□ 0.17
TRA2B-201ENST00000259043 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
TRA2B-201ENST00000259043 PLCD3Q8N3E9 789 aa16.09■□□□□ 0.17
TRA2B-201ENST00000259043 FKBP8Q14318 412 aa16.05■□□□□ 0.16
TRA2B-201ENST00000259043 MAP3K13O43283 966 aa16.02■□□□□ 0.16
TRA2B-201ENST00000259043 ATN1P54259 1190 aaPredicted RBP16.02■□□□□ 0.16
TRA2B-201ENST00000259043 ZBTB47Q9UFB7 747 aaPredicted RBP16.02■□□□□ 0.16
TRA2B-201ENST00000259043 BMP2KQ9NSY1 1161 aaPredicted RBP15.97■□□□□ 0.15
TRA2B-201ENST00000259043 TIE1P35590 1138 aa15.95■□□□□ 0.14
TRA2B-201ENST00000259043 TRPC6Q9Y210 931 aa15.95■□□□□ 0.14
TRA2B-201ENST00000259043 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
TRA2B-201ENST00000259043 MAMSTRQ6ZN01 415 aa15.93■□□□□ 0.14
TRA2B-201ENST00000259043 NUBP1P53384 320 aa15.91■□□□□ 0.14
TRA2B-201ENST00000259043 SGIP1Q9BQI5 828 aa15.9■□□□□ 0.14
TRA2B-201ENST00000259043 PCDHB13Q9Y5F0 798 aa15.86■□□□□ 0.13
TRA2B-201ENST00000259043 TTLL13PA6NNM8 815 aa15.84■□□□□ 0.13
TRA2B-201ENST00000259043 FAM212AQ96EL1 285 aa15.83■□□□□ 0.12
TRA2B-201ENST00000259043 SCUBE2Q9NQ36 999 aa15.83■□□□□ 0.12
TRA2B-201ENST00000259043 POTEFA5A3E0 1075 aa15.82■□□□□ 0.12
TRA2B-201ENST00000259043 POTEMA6NI47 508 aa15.79■□□□□ 0.12
TRA2B-201ENST00000259043 PLSCR2Q9NRY7 297 aa15.78■□□□□ 0.12
TRA2B-201ENST00000259043 FBXO3Q9UK99 471 aa15.76■□□□□ 0.11
TRA2B-201ENST00000259043 SEC24BO95487 1268 aa15.75■□□□□ 0.11
TRA2B-201ENST00000259043 POTEGQ6S5H5 508 aa15.74■□□□□ 0.11
TRA2B-201ENST00000259043 IFNL1Q8IU54 200 aa15.74■□□□□ 0.11
TRA2B-201ENST00000259043 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
TRA2B-201ENST00000259043 IER5LQ5T953 404 aa15.73■□□□□ 0.11
TRA2B-201ENST00000259043 COLQQ9Y215 455 aaPredicted RBP15.73■□□□□ 0.11
TRA2B-201ENST00000259043 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
TRA2B-201ENST00000259043 TMEM106CQ9BVX2 250 aa15.66■□□□□ 0.1
TRA2B-201ENST00000259043 FAM163AQ96GL9 167 aaPredicted RBP15.62■□□□□ 0.09
TRA2B-201ENST00000259043 PCDH10Q9P2E7 1040 aa15.6■□□□□ 0.09
TRA2B-201ENST00000259043 PYGBP11216 843 aa15.59■□□□□ 0.09
TRA2B-201ENST00000259043 LCE2DQ5TA82 110 aaPredicted RBP15.59■□□□□ 0.09
TRA2B-201ENST00000259043 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
TRA2B-201ENST00000259043 PLCG2P16885 1265 aa15.53■□□□□ 0.08
TRA2B-201ENST00000259043 KLHL34Q8N239 644 aa15.52■□□□□ 0.08
TRA2B-201ENST00000259043 IRX5P78411 483 aaPredicted RBP15.5■□□□□ 0.07
TRA2B-201ENST00000259043 PCDHB8Q9UN66 801 aa15.49■□□□□ 0.07
TRA2B-201ENST00000259043 GSE1Q14687 1217 aa15.48■□□□□ 0.07
TRA2B-201ENST00000259043 SLAIN1Q8ND83 568 aa15.45■□□□□ 0.06
TRA2B-201ENST00000259043 OCEL1Q9H607 264 aa15.44■□□□□ 0.06
TRA2B-201ENST00000259043 ZNF467Q7Z7K2 595 aaPredicted RBP15.4■□□□□ 0.06
TRA2B-201ENST00000259043 CHRM1P11229 460 aaPredicted RBP15.38■□□□□ 0.05
TRA2B-201ENST00000259043 ST18O60284 1047 aa15.3■□□□□ 0.04
TRA2B-201ENST00000259043 GOLGA2Q08379 1002 aa15.29■□□□□ 0.04
TRA2B-201ENST00000259043 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.29■□□□□ 0.04
TRA2B-201ENST00000259043 MKRN3Q13064 507 aaKnown RBP15.28■□□□□ 0.04
TRA2B-201ENST00000259043 PSEN1P49768 467 aa15.25■□□□□ 0.03
TRA2B-201ENST00000259043 PDCD7Q8N8D1 485 aaKnown RBP15.25■□□□□ 0.03
TRA2B-201ENST00000259043 SPOCK2Q92563 424 aa15.25■□□□□ 0.03
TRA2B-201ENST00000259043 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
TRA2B-201ENST00000259043 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
TRA2B-201ENST00000259043 SNPHO15079 494 aa15.21■□□□□ 0.03
TRA2B-201ENST00000259043 L3MBTL3Q96JM7 780 aaPredicted RBP15.19■□□□□ 0.02
TRA2B-201ENST00000259043 PDAP1Q13442 181 aaKnown RBP15.18■□□□□ 0.02
TRA2B-201ENST00000259043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.18■□□□□ 0.021e-7■□□□□ 10.8
TRA2B-201ENST00000259043 CIZ1Q9ULV3 898 aaPredicted RBP15.18■□□□□ 0.02
TRA2B-201ENST00000259043 C3orf67Q6ZVT6 689 aa15.16■□□□□ 0.02
TRA2B-201ENST00000259043 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
TRA2B-201ENST00000259043 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
TRA2B-201ENST00000259043 CABP2Q9NPB3 220 aa15.06■□□□□ 0
TRA2B-201ENST00000259043 MARVELD3Q96A59 401 aa15.02■□□□□ -0
TRA2B-201ENST00000259043 TRIM41Q8WV44 630 aa15.01□□□□□ -0.01
TRA2B-201ENST00000259043 DPY19L2Q6NUT2 758 aa15□□□□□ -0.01
TRA2B-201ENST00000259043 G3V3G9 751 aa14.96□□□□□ -0.01
TRA2B-201ENST00000259043 BOLA1Q9Y3E2 137 aa14.96□□□□□ -0.01
TRA2B-201ENST00000259043 EMP3P54852 163 aa14.92□□□□□ -0.02
TRA2B-201ENST00000259043 SPNS2Q8IVW8 549 aa14.87□□□□□ -0.03
TRA2B-201ENST00000259043 EFCAB3Q8N7B9 438 aa14.86□□□□□ -0.03
TRA2B-201ENST00000259043 MMRN1Q13201 1228 aa14.84□□□□□ -0.03
TRA2B-201ENST00000259043 FAM205CA6NFA0 338 aa14.81□□□□□ -0.04
TRA2B-201ENST00000259043 HS3ST6Q96QI5 342 aa14.81□□□□□ -0.04
TRA2B-201ENST00000259043 HOXB3P14651 431 aaPredicted RBP14.8□□□□□ -0.04
TRA2B-201ENST00000259043 RIOK3O14730 519 aaKnown RBP14.79□□□□□ -0.04
TRA2B-201ENST00000259043 POTEB3A0JP26 581 aa14.78□□□□□ -0.04
TRA2B-201ENST00000259043 POTEBQ6S5H4 581 aa14.78□□□□□ -0.04
TRA2B-201ENST00000259043 SOX12O15370 315 aa14.75□□□□□ -0.05
TRA2B-201ENST00000259043 ZNF710Q8N1W2 664 aa14.75□□□□□ -0.05
TRA2B-201ENST00000259043 RNF25Q96BH1 459 aaPredicted RBP14.75□□□□□ -0.05
TRA2B-201ENST00000259043 DOK7Q18PE1 504 aa14.74□□□□□ -0.05
TRA2B-201ENST00000259043 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.72□□□□□ -0.05
TRA2B-201ENST00000259043 VGFO15240 615 aaPredicted RBP14.72□□□□□ -0.05
TRA2B-201ENST00000259043 ZFP91Q96JP5 570 aaPredicted RBP14.72□□□□□ -0.05
TRA2B-201ENST00000259043 KRTAP3-3Q9BYR6 98 aa14.72□□□□□ -0.05
TRA2B-201ENST00000259043 KRTAP3-2Q9BYR7 98 aa14.72□□□□□ -0.05
TRA2B-201ENST00000259043 HOXB1P14653 301 aaPredicted RBP14.71□□□□□ -0.05
TRA2B-201ENST00000259043 MICALL2Q8IY33 904 aa14.71□□□□□ -0.05
TRA2B-201ENST00000259043 RIMBP2O15034 1052 aa14.66□□□□□ -0.06
TRA2B-201ENST00000259043 MS4A4AQ96JQ5 239 aa14.65□□□□□ -0.06
TRA2B-201ENST00000259043 PHF8Q9UPP1 1060 aa14.64□□□□□ -0.07
TRA2B-201ENST00000259043 TMEM92Q6UXU6 159 aa14.63□□□□□ -0.07
TRA2B-201ENST00000259043 ERBB3P21860 1342 aa14.63□□□□□ -0.07
TRA2B-201ENST00000259043 TAOK2Q9UL54 1235 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms