RNA–Protein interactions for RNA: ENST00000258229.13

PCNX2-201, Transcript of pecanex 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PCNX2, Length 7,518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-201ENST00000258229 TRIM44Q96DX7 344 aaPredicted RBP21.28■■□□□ 1
PCNX2-201ENST00000258229 WDR43Q15061 677 aaKnown RBP eCLIP21.27■■□□□ 1
PCNX2-201ENST00000258229 LMOD2Q6P5Q4 547 aa21.27■□□□□ 0.99
PCNX2-201ENST00000258229 CCDC136Q96JN2 1154 aa21.26■□□□□ 0.99
PCNX2-201ENST00000258229 NAP1L2Q9ULW6 460 aaPredicted RBP21.26■□□□□ 0.99
PCNX2-201ENST00000258229 ISY1Q9ULR0 285 aaKnown RBP21.26■□□□□ 0.99
PCNX2-201ENST00000258229 ANO8Q9HCE9 1232 aaPredicted RBP21.25■□□□□ 0.99
PCNX2-201ENST00000258229 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
PCNX2-201ENST00000258229 PPM1GO15355 546 aaPredicted RBP21.23■□□□□ 0.99
PCNX2-201ENST00000258229 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
PCNX2-201ENST00000258229 PDE4CQ08493 712 aa21.19■□□□□ 0.98
PCNX2-201ENST00000258229 TNNT2P45379 298 aaPredicted RBP21.15■□□□□ 0.98
PCNX2-201ENST00000258229 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
PCNX2-201ENST00000258229 FBXO3Q9UK99 471 aa21.13■□□□□ 0.97
PCNX2-201ENST00000258229 DDX10Q13206 875 aaKnown RBP21.13■□□□□ 0.97
PCNX2-201ENST00000258229 PPP1R15AO75807 674 aaPredicted RBP21.1■□□□□ 0.97
PCNX2-201ENST00000258229 GOLGA2Q08379 1002 aa21.1■□□□□ 0.97
PCNX2-201ENST00000258229 ARID4BQ4LE39 1312 aaPredicted RBP21.1■□□□□ 0.97
PCNX2-201ENST00000258229 CHIC2Q9UKJ5 165 aa21.09■□□□□ 0.97
PCNX2-201ENST00000258229 RTN4Q9NQC3 1192 aaKnown RBP21.07■□□□□ 0.96
PCNX2-201ENST00000258229 ERICH6BQ5W0A0 696 aa21.06■□□□□ 0.96
PCNX2-201ENST00000258229 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.06■□□□□ 0.96
PCNX2-201ENST00000258229 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
PCNX2-201ENST00000258229 FGD1P98174 961 aa21.04■□□□□ 0.96
PCNX2-201ENST00000258229 GOLGA6L22H0YM25 854 aa20.98■□□□□ 0.95
PCNX2-201ENST00000258229 TONSLQ96HA7 1378 aa20.98■□□□□ 0.95
PCNX2-201ENST00000258229 NAP1L5Q96NT1 182 aaPredicted RBP20.98■□□□□ 0.95
PCNX2-201ENST00000258229 OS9Q13438 667 aaPredicted RBP20.95■□□□□ 0.94
PCNX2-201ENST00000258229 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
PCNX2-201ENST00000258229 KCNJ4P48050 445 aa20.92■□□□□ 0.94
PCNX2-201ENST00000258229 BECN1Q14457 450 aa20.92■□□□□ 0.94
PCNX2-201ENST00000258229 CASC1Q6TDU7 716 aa20.91■□□□□ 0.94
PCNX2-201ENST00000258229 ARID3AQ99856 593 aa20.91■□□□□ 0.94
PCNX2-201ENST00000258229 KRI1Q8N9T8 703 aaKnown RBP20.9■□□□□ 0.94
PCNX2-201ENST00000258229 SOX12O15370 315 aa20.9■□□□□ 0.94
PCNX2-201ENST00000258229 MRS2Q9HD23 443 aa20.88■□□□□ 0.93
PCNX2-201ENST00000258229 ACIN1Q9UKV3 1341 aaKnown RBP20.88■□□□□ 0.93
PCNX2-201ENST00000258229 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
PCNX2-201ENST00000258229 NOC3LQ8WTT2 800 aaKnown RBP20.86■□□□□ 0.93
PCNX2-201ENST00000258229 WWC1Q8IX03 1113 aa20.83■□□□□ 0.92
PCNX2-201ENST00000258229 KCNH8Q96L42 1107 aa20.81■□□□□ 0.92
PCNX2-201ENST00000258229 DRC7Q8IY82 874 aa20.81■□□□□ 0.92
PCNX2-201ENST00000258229 RGL3Q3MIN7 710 aa20.8■□□□□ 0.92
PCNX2-201ENST00000258229 GOLGA6L6A8MZA4 724 aa20.79■□□□□ 0.92
PCNX2-201ENST00000258229 SPRYD3Q8NCJ5 442 aa20.79■□□□□ 0.92
PCNX2-201ENST00000258229 ZNF330Q9Y3S2 320 aaPredicted RBP20.77■□□□□ 0.92
PCNX2-201ENST00000258229 PNNQ9H307 717 aaKnown RBP20.76■□□□□ 0.91
PCNX2-201ENST00000258229 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
PCNX2-201ENST00000258229 GNL2Q13823 731 aaKnown RBP20.73■□□□□ 0.91
PCNX2-201ENST00000258229 GOLGA6L4A6NEF3 574 aa20.72■□□□□ 0.91
PCNX2-201ENST00000258229 FRAT1Q92837 279 aaPredicted RBP20.71■□□□□ 0.91
PCNX2-201ENST00000258229 RGS3P49796 1198 aa20.69■□□□□ 0.9
PCNX2-201ENST00000258229 DDRGK1Q96HY6 314 aa20.69■□□□□ 0.9
PCNX2-201ENST00000258229 A0A0U1RQG5 324 aaPredicted RBP20.68■□□□□ 0.9
PCNX2-201ENST00000258229 KIAA2012Q0VF49 1180 aa20.67■□□□□ 0.9
PCNX2-201ENST00000258229 TRHP20396 242 aaPredicted RBP20.67■□□□□ 0.9
PCNX2-201ENST00000258229 CREBRFQ8IUR6 639 aa20.67■□□□□ 0.9
PCNX2-201ENST00000258229 APBB1O00213 710 aa20.63■□□□□ 0.89
PCNX2-201ENST00000258229 NRDCO43847 1150 aa20.62■□□□□ 0.89
PCNX2-201ENST00000258229 ABCC9O60706 1549 aa20.62■□□□□ 0.89
PCNX2-201ENST00000258229 TSPY4P0CV99 314 aa20.62■□□□□ 0.89
PCNX2-201ENST00000258229 TSPY10P0CW01 314 aa20.62■□□□□ 0.89
PCNX2-201ENST00000258229 CCDC9Q9Y3X0 531 aaKnown RBP20.61■□□□□ 0.89
PCNX2-201ENST00000258229 U2SURPO15042 1029 aaKnown RBP20.6■□□□□ 0.89
PCNX2-201ENST00000258229 CHAF1AQ13111 956 aaPredicted RBP20.58■□□□□ 0.88
PCNX2-201ENST00000258229 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
PCNX2-201ENST00000258229 ANP32EQ9BTT0 268 aa20.57■□□□□ 0.88
PCNX2-201ENST00000258229 CFAP53Q96M91 514 aa20.57■□□□□ 0.88
PCNX2-201ENST00000258229 MAPK8IP3Q9UPT6 1336 aa20.56■□□□□ 0.88
PCNX2-201ENST00000258229 G3V3G9 751 aa20.56■□□□□ 0.88
PCNX2-201ENST00000258229 DCAF8Q5TAQ9 597 aa20.56■□□□□ 0.88
PCNX2-201ENST00000258229 POGKQ9P215 609 aa20.55■□□□□ 0.88
PCNX2-201ENST00000258229 MLECQ14165 292 aa20.55■□□□□ 0.88
PCNX2-201ENST00000258229 TMX4Q9H1E5 349 aaPredicted RBP20.53■□□□□ 0.88
PCNX2-201ENST00000258229 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
PCNX2-201ENST00000258229 PATL2C9JE40 543 aaKnown RBP20.52■□□□□ 0.88
PCNX2-201ENST00000258229 CNKSR2Q8WXI2 1034 aa20.52■□□□□ 0.88
PCNX2-201ENST00000258229 KNSTRNQ9Y448 316 aa20.48■□□□□ 0.87
PCNX2-201ENST00000258229 MSNP26038 577 aaKnown RBP20.47■□□□□ 0.87
PCNX2-201ENST00000258229 HSP90B1P14625 803 aaKnown RBP20.47■□□□□ 0.87
PCNX2-201ENST00000258229 SAFB2Q14151 953 aaKnown RBP eCLIP20.47■□□□□ 0.87
PCNX2-201ENST00000258229 CHMP3Q9Y3E7 222 aa20.47■□□□□ 0.87
PCNX2-201ENST00000258229 PAK3O75914 559 aaPredicted RBP20.46■□□□□ 0.87
PCNX2-201ENST00000258229 CC2D1BQ5T0F9 858 aaKnown RBP20.46■□□□□ 0.87
PCNX2-201ENST00000258229 L1TD1Q5T7N2 865 aaKnown RBP20.44■□□□□ 0.86
PCNX2-201ENST00000258229 RASSF8Q8NHQ8 419 aa20.42■□□□□ 0.86
PCNX2-201ENST00000258229 CHMP7Q8WUX9 453 aaPredicted RBP20.41■□□□□ 0.86
PCNX2-201ENST00000258229 TNNT3P45378 269 aaPredicted RBP20.4■□□□□ 0.86
PCNX2-201ENST00000258229 SUPT16HQ9Y5B9 1047 aaKnown RBP20.4■□□□□ 0.86
PCNX2-201ENST00000258229 CSB-PGBD3P0DP91 1061 aa20.37■□□□□ 0.85
PCNX2-201ENST00000258229 GZF1Q9H116 711 aaPredicted RBP20.37■□□□□ 0.85
PCNX2-201ENST00000258229 CEP89Q96ST8 783 aa20.36■□□□□ 0.85
PCNX2-201ENST00000258229 PES1O00541 588 aaKnown RBP20.36■□□□□ 0.85
PCNX2-201ENST00000258229 RAD21O60216 631 aa20.36■□□□□ 0.85
PCNX2-201ENST00000258229 EIF4G2P78344 907 aaKnown RBP eCLIP20.36■□□□□ 0.85
PCNX2-201ENST00000258229 HSCBQ8IWL3 235 aa20.34■□□□□ 0.85
PCNX2-201ENST00000258229 NUDCQ9Y266 331 aa20.33■□□□□ 0.85
PCNX2-201ENST00000258229 GORABQ5T7V8 394 aa20.33■□□□□ 0.84
PCNX2-201ENST00000258229 MSH5O43196 834 aa20.32■□□□□ 0.84
PCNX2-201ENST00000258229 KLHL34Q8N239 644 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms