RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
TCN1-201ENST00000257264 ZBTB12Q9Y330 459 aaPredicted RBP9.55□□□□□ -0.88
TCN1-201ENST00000257264 HS6ST3Q8IZP7 471 aa9.54□□□□□ -0.88
TCN1-201ENST00000257264 MIER1Q8N108 512 aa9.54□□□□□ -0.88
TCN1-201ENST00000257264 C14orf37Q86TY3 774 aa9.54□□□□□ -0.88
TCN1-201ENST00000257264 TRIM41Q8WV44 630 aa9.52□□□□□ -0.89
TCN1-201ENST00000257264 REM2Q8IYK8 340 aaPredicted RBP9.5□□□□□ -0.89
TCN1-201ENST00000257264 ZBTB47Q9UFB7 747 aaPredicted RBP9.47□□□□□ -0.89
TCN1-201ENST00000257264 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
TCN1-201ENST00000257264 ZNF692Q9BU19 519 aaPredicted RBP9.45□□□□□ -0.9
TCN1-201ENST00000257264 FXR2P51116 673 aaKnown RBP eCLIP9.41□□□□□ -0.9
TCN1-201ENST00000257264 GTPBP6O43824 516 aaPredicted RBP9.39□□□□□ -0.91
TCN1-201ENST00000257264 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
TCN1-201ENST00000257264 NKX1-1Q15270 411 aaPredicted RBP9.38□□□□□ -0.91
TCN1-201ENST00000257264 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
TCN1-201ENST00000257264 SPDYE2BA6NHP3 402 aa9.34□□□□□ -0.91
TCN1-201ENST00000257264 SPDYE6P0CI01 402 aa9.34□□□□□ -0.91
TCN1-201ENST00000257264 GSE1Q14687 1217 aa9.34□□□□□ -0.91
TCN1-201ENST00000257264 SPDYE2Q495Y8 402 aa9.34□□□□□ -0.91
TCN1-201ENST00000257264 PABPN1Q86U42 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
TCN1-201ENST00000257264 SSUH2Q9Y2M2 353 aa9.34□□□□□ -0.91
TCN1-201ENST00000257264 P3H3Q8IVL6 736 aa9.33□□□□□ -0.92
TCN1-201ENST00000257264 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
TCN1-201ENST00000257264 RIOK3O14730 519 aaKnown RBP9.31□□□□□ -0.92
TCN1-201ENST00000257264 EVX2Q03828 476 aa9.29□□□□□ -0.92
TCN1-201ENST00000257264 RYDENQ9NUL5 291 aaKnown RBP9.29□□□□□ -0.92
TCN1-201ENST00000257264 STK25O00506 426 aa9.27□□□□□ -0.93
TCN1-201ENST00000257264 LHX8Q68G74 356 aa9.26□□□□□ -0.93
TCN1-201ENST00000257264 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
TCN1-201ENST00000257264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
TCN1-201ENST00000257264 BRPF1P55201 1214 aaPredicted RBP9.24□□□□□ -0.93
TCN1-201ENST00000257264 SUPT5HO00267 1087 aaKnown RBP9.24□□□□□ -0.93
TCN1-201ENST00000257264 VGFO15240 615 aaPredicted RBP9.24□□□□□ -0.93
TCN1-201ENST00000257264 DCAF8Q5TAQ9 597 aa9.2□□□□□ -0.94
TCN1-201ENST00000257264 PRKAR2AP13861 404 aaKnown RBP9.19□□□□□ -0.94
TCN1-201ENST00000257264 WDR70Q9NW82 654 aa9.19□□□□□ -0.94
TCN1-201ENST00000257264 RANGAP1P46060 587 aaPredicted RBP9.18□□□□□ -0.94
TCN1-201ENST00000257264 PODXL2Q9NZ53 605 aa9.18□□□□□ -0.94
TCN1-201ENST00000257264 NUBP1P53384 320 aa9.17□□□□□ -0.94
TCN1-201ENST00000257264 NEUROD2Q15784 382 aa9.16□□□□□ -0.94
TCN1-201ENST00000257264 KCNV2Q8TDN2 545 aa9.16□□□□□ -0.94
TCN1-201ENST00000257264 SGIP1Q9BQI5 828 aa9.16□□□□□ -0.94
TCN1-201ENST00000257264 PLSCR2Q9NRY7 297 aa9.16□□□□□ -0.94
TCN1-201ENST00000257264 STK24Q9Y6E0 443 aa9.16□□□□□ -0.94
TCN1-201ENST00000257264 GABBR2O75899 941 aa9.15□□□□□ -0.95
TCN1-201ENST00000257264 C19orf67A6NJJ6 358 aa9.14□□□□□ -0.95
TCN1-201ENST00000257264 BCL11BQ9C0K0 894 aaPredicted RBP9.14□□□□□ -0.95
TCN1-201ENST00000257264 CLEC11AQ9Y240 323 aa9.13□□□□□ -0.95
TCN1-201ENST00000257264 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
TCN1-201ENST00000257264 CHRM1P11229 460 aaPredicted RBP9.12□□□□□ -0.95
TCN1-201ENST00000257264 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
TCN1-201ENST00000257264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.1□□□□□ -0.95
TCN1-201ENST00000257264 ZC3H15Q8WU90 426 aaKnown RBP9.1□□□□□ -0.95
TCN1-201ENST00000257264 ZFP91Q96JP5 570 aaPredicted RBP9.1□□□□□ -0.95
TCN1-201ENST00000257264 SLC24A3Q9HC58 644 aa9.06□□□□□ -0.96
TCN1-201ENST00000257264 CADPS2Q86UW7 1296 aa9.04□□□□□ -0.96
TCN1-201ENST00000257264 ARHGEF1Q92888 912 aaKnown RBP9.03□□□□□ -0.96
TCN1-201ENST00000257264 UBTFP17480 764 aaKnown RBP9.02□□□□□ -0.97
TCN1-201ENST00000257264 ZMYND15Q9H091 742 aa8.98□□□□□ -0.97
TCN1-201ENST00000257264 TESPA1A2RU30 521 aaPredicted RBP8.96□□□□□ -0.97
TCN1-201ENST00000257264 RSPH6AQ9H0K4 717 aa8.96□□□□□ -0.97
TCN1-201ENST00000257264 ZMYND10O75800 440 aa8.95□□□□□ -0.98
TCN1-201ENST00000257264 CLCN6P51797 869 aa8.95□□□□□ -0.98
TCN1-201ENST00000257264 TRIM26Q12899 539 aaPredicted RBP8.95□□□□□ -0.98
TCN1-201ENST00000257264 E2F4Q16254 413 aa8.95□□□□□ -0.98
TCN1-201ENST00000257264 SEMA3EO15041 775 aa8.94□□□□□ -0.98
TCN1-201ENST00000257264 PYGBP11216 843 aa8.94□□□□□ -0.98
TCN1-201ENST00000257264 SMYD5Q6GMV2 418 aa8.93□□□□□ -0.98
TCN1-201ENST00000257264 CHADLQ6NUI6 762 aa8.93□□□□□ -0.98
TCN1-201ENST00000257264 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
TCN1-201ENST00000257264 PRR29P0C7W0 189 aa8.92□□□□□ -0.98
TCN1-201ENST00000257264 MNX1P50219 401 aaPredicted RBP8.9□□□□□ -0.99
TCN1-201ENST00000257264 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.99
TCN1-201ENST00000257264 BARGINQ6ZT62 677 aa8.89□□□□□ -0.99
TCN1-201ENST00000257264 DCBLD2Q96PD2 775 aa8.89□□□□□ -0.99
TCN1-201ENST00000257264 CREBZFQ9NS37 354 aa8.89□□□□□ -0.99
TCN1-201ENST00000257264 CD44P16070 742 aaKnown RBP8.87□□□□□ -0.99
TCN1-201ENST00000257264 HRCP23327 699 aa8.86□□□□□ -0.99
TCN1-201ENST00000257264 POTEIP0CG38 1075 aa8.86□□□□□ -0.99
TCN1-201ENST00000257264 ZNF467Q7Z7K2 595 aaPredicted RBP8.86□□□□□ -0.99
TCN1-201ENST00000257264 AK7Q96M32 723 aa8.86□□□□□ -0.99
TCN1-201ENST00000257264 IL27Q8NEV9 243 aa8.85□□□□□ -0.99
TCN1-201ENST00000257264 PDAP1Q13442 181 aaKnown RBP8.83□□□□□ -1
TCN1-201ENST00000257264 MFRPQ9BY79 579 aa8.82□□□□□ -1
TCN1-201ENST00000257264 GPBP1L1Q9HC44 474 aaPredicted RBP8.82□□□□□ -1
TCN1-201ENST00000257264 NISCHQ9Y2I1 1504 aa8.82□□□□□ -1
TCN1-201ENST00000257264 ARID3AQ99856 593 aa8.82□□□□□ -1
TCN1-201ENST00000257264 KRI1Q8N9T8 703 aaKnown RBP8.8□□□□□ -1
TCN1-201ENST00000257264 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
TCN1-201ENST00000257264 FARP1Q9Y4F1 1045 aaPredicted RBP8.78□□□□□ -1
TCN1-201ENST00000257264 PPP1R37O75864 691 aa8.77□□□□□ -1.01
TCN1-201ENST00000257264 ARIH1Q9Y4X5 557 aaPredicted RBP8.76□□□□□ -1.01
TCN1-201ENST00000257264 C1orf115Q9H7X2 142 aa8.74□□□□□ -1.01
TCN1-201ENST00000257264 NLRP6P59044 892 aa8.73□□□□□ -1.01
TCN1-201ENST00000257264 GPIHBP1Q8IV16 184 aa8.73□□□□□ -1.01
TCN1-201ENST00000257264 ZBTB7CA1YPR0 619 aa8.73□□□□□ -1.01
TCN1-201ENST00000257264 POTEMA6NI47 508 aa8.73□□□□□ -1.01
TCN1-201ENST00000257264 PDE4AP27815 886 aa8.73□□□□□ -1.01
TCN1-201ENST00000257264 PSEN1P49768 467 aa8.73□□□□□ -1.01
TCN1-201ENST00000257264 LARP6Q9BRS8 491 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms