RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
FAM78A-201ENST00000247295 MRS2Q9HD23 443 aa15.36■□□□□ 0.05
FAM78A-201ENST00000247295 SUPT16HQ9Y5B9 1047 aaKnown RBP15.36■□□□□ 0.05
FAM78A-201ENST00000247295 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
FAM78A-201ENST00000247295 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
FAM78A-201ENST00000247295 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
FAM78A-201ENST00000247295 KCNH8Q96L42 1107 aa15.32■□□□□ 0.04
FAM78A-201ENST00000247295 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
FAM78A-201ENST00000247295 BAZ1BQ9UIG0 1483 aaKnown RBP15.3■□□□□ 0.04
FAM78A-201ENST00000247295 EEA1Q15075 1411 aa15.29■□□□□ 0.04
FAM78A-201ENST00000247295 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
FAM78A-201ENST00000247295 SIN3AQ96ST3 1273 aa15.28■□□□□ 0.04
FAM78A-201ENST00000247295 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
FAM78A-201ENST00000247295 EIF4G2P78344 907 aaKnown RBP eCLIP15.27■□□□□ 0.03
FAM78A-201ENST00000247295 SOGA1O94964 1423 aa15.26■□□□□ 0.03
FAM78A-201ENST00000247295 CCDC136Q96JN2 1154 aa15.26■□□□□ 0.03
FAM78A-201ENST00000247295 NACADO15069 1562 aa15.24■□□□□ 0.03
FAM78A-201ENST00000247295 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
FAM78A-201ENST00000247295 KIF27Q86VH2 1401 aa15.23■□□□□ 0.03
FAM78A-201ENST00000247295 PLEKHD1A6NEE1 506 aa15.21■□□□□ 0.02
FAM78A-201ENST00000247295 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
FAM78A-201ENST00000247295 RBM19Q9Y4C8 960 aaKnown RBP15.2■□□□□ 0.02
FAM78A-201ENST00000247295 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.19■□□□□ 0.02
FAM78A-201ENST00000247295 CFDP1Q9UEE9 299 aaPredicted RBP15.18■□□□□ 0.02
FAM78A-201ENST00000247295 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
FAM78A-201ENST00000247295 WDR43Q15061 677 aaKnown RBP eCLIP15.17■□□□□ 0.02
FAM78A-201ENST00000247295 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
FAM78A-201ENST00000247295 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
FAM78A-201ENST00000247295 LAS1LQ9Y4W2 734 aaKnown RBP15.12■□□□□ 0.01
FAM78A-201ENST00000247295 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
FAM78A-201ENST00000247295 ABCC8Q09428 1581 aa15.1■□□□□ 0.01
FAM78A-201ENST00000247295 KANK4Q5T7N3 995 aaPredicted RBP15.1■□□□□ 0.01
FAM78A-201ENST00000247295 HSP90AA1P07900 732 aaKnown RBP15.08■□□□□ 0
FAM78A-201ENST00000247295 NOP58Q9Y2X3 529 aaKnown RBP15.07■□□□□ 0
FAM78A-201ENST00000247295 CCDC88BA6NC98 1476 aa15.07■□□□□ 0
FAM78A-201ENST00000247295 CARD11Q9BXL7 1154 aa15.07■□□□□ 0
FAM78A-201ENST00000247295 CCNB3Q8WWL7 1395 aa15.06■□□□□ 0
FAM78A-201ENST00000247295 CUX2O14529 1486 aa15.06■□□□□ 0
FAM78A-201ENST00000247295 CARMIL1Q5VZK9 1371 aa15.06■□□□□ 0
FAM78A-201ENST00000247295 ANP32BQ92688 251 aaKnown RBP15.06■□□□□ 0
FAM78A-201ENST00000247295 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.05■□□□□ -0
FAM78A-201ENST00000247295 UPF2Q9HAU5 1272 aaKnown RBP15.03■□□□□ -0
FAM78A-201ENST00000247295 B4GALNT3Q6L9W6 998 aa15□□□□□ -0.01
FAM78A-201ENST00000247295 FOXD1Q16676 465 aa15□□□□□ -0.01
FAM78A-201ENST00000247295 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
FAM78A-201ENST00000247295 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
FAM78A-201ENST00000247295 ERICH6BQ5W0A0 696 aa14.97□□□□□ -0.01
FAM78A-201ENST00000247295 PPP1R15AO75807 674 aaPredicted RBP14.97□□□□□ -0.01
FAM78A-201ENST00000247295 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
FAM78A-201ENST00000247295 KNSTRNQ9Y448 316 aa14.95□□□□□ -0.02
FAM78A-201ENST00000247295 VPS8Q8N3P4 1428 aa14.95□□□□□ -0.02
FAM78A-201ENST00000247295 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
FAM78A-201ENST00000247295 ZBTB7CA1YPR0 619 aa14.94□□□□□ -0.02
FAM78A-201ENST00000247295 DCAF11Q8TEB1 546 aa14.94□□□□□ -0.02
FAM78A-201ENST00000247295 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
FAM78A-201ENST00000247295 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
FAM78A-201ENST00000247295 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
FAM78A-201ENST00000247295 FHAD1B1AJZ9 1412 aa14.93□□□□□ -0.02
FAM78A-201ENST00000247295 CC2D1BQ5T0F9 858 aaKnown RBP14.92□□□□□ -0.02
FAM78A-201ENST00000247295 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
FAM78A-201ENST00000247295 ARID4BQ4LE39 1312 aaPredicted RBP14.91□□□□□ -0.02
FAM78A-201ENST00000247295 PPP4R2Q9NY27 417 aa14.91□□□□□ -0.02
FAM78A-201ENST00000247295 WIZO95785 1651 aa14.88□□□□□ -0.03
FAM78A-201ENST00000247295 TRIM44Q96DX7 344 aaPredicted RBP14.88□□□□□ -0.03
FAM78A-201ENST00000247295 A0A0G2JS52 829 aa14.86□□□□□ -0.03
FAM78A-201ENST00000247295 DDRGK1Q96HY6 314 aa14.85□□□□□ -0.03
FAM78A-201ENST00000247295 SETD5Q9C0A6 1442 aa14.85□□□□□ -0.03
FAM78A-201ENST00000247295 HSPA5P11021 654 aaKnown RBP14.85□□□□□ -0.03
FAM78A-201ENST00000247295 RAB3GAP2Q9H2M9 1393 aa14.85□□□□□ -0.03
FAM78A-201ENST00000247295 PRKCSHP14314 528 aaPredicted RBP14.84□□□□□ -0.03
FAM78A-201ENST00000247295 PKD2Q13563 968 aa14.84□□□□□ -0.03
FAM78A-201ENST00000247295 CDCA8Q53HL2 280 aa14.84□□□□□ -0.03
FAM78A-201ENST00000247295 CFAP53Q96M91 514 aa14.82□□□□□ -0.04
FAM78A-201ENST00000247295 RGS3P49796 1198 aa14.82□□□□□ -0.04
FAM78A-201ENST00000247295 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
FAM78A-201ENST00000247295 RUSC2Q8N2Y8 1516 aa14.82□□□□□ -0.04
FAM78A-201ENST00000247295 SAFB2Q14151 953 aaKnown RBP eCLIP14.82□□□□□ -0.04
FAM78A-201ENST00000247295 MYH16Q9H6N6 1097 aa14.8□□□□□ -0.04
FAM78A-201ENST00000247295 POGKQ9P215 609 aa14.8□□□□□ -0.04
FAM78A-201ENST00000247295 ARHGAP35Q9NRY4 1499 aa14.79□□□□□ -0.04
FAM78A-201ENST00000247295 MLECQ14165 292 aa14.78□□□□□ -0.04
FAM78A-201ENST00000247295 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
FAM78A-201ENST00000247295 U2SURPO15042 1029 aaKnown RBP14.78□□□□□ -0.04
FAM78A-201ENST00000247295 RAPGEF2Q9Y4G8 1499 aa14.77□□□□□ -0.04
FAM78A-201ENST00000247295 GGT6Q6P531 493 aa14.77□□□□□ -0.05
FAM78A-201ENST00000247295 MPHOSPH9Q99550 1183 aa14.77□□□□□ -0.05
FAM78A-201ENST00000247295 TIMELESSQ9UNS1 1208 aa14.76□□□□□ -0.05
FAM78A-201ENST00000247295 AMER1Q5JTC6 1135 aaPredicted RBP14.76□□□□□ -0.05
FAM78A-201ENST00000247295 FTSJ3Q8IY81 847 aaKnown RBP14.76□□□□□ -0.05
FAM78A-201ENST00000247295 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
FAM78A-201ENST00000247295 TMF1P82094 1093 aa14.75□□□□□ -0.05
FAM78A-201ENST00000247295 SOX12O15370 315 aa14.74□□□□□ -0.05
FAM78A-201ENST00000247295 LMOD2Q6P5Q4 547 aa14.74□□□□□ -0.05
FAM78A-201ENST00000247295 MAPK8IP3Q9UPT6 1336 aa14.73□□□□□ -0.05
FAM78A-201ENST00000247295 BECN1Q14457 450 aa14.73□□□□□ -0.05
FAM78A-201ENST00000247295 L3MBTL2Q969R5 705 aa14.72□□□□□ -0.05
FAM78A-201ENST00000247295 SMARCA2P51531 1590 aa14.72□□□□□ -0.05
FAM78A-201ENST00000247295 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
FAM78A-201ENST00000247295 NUP155O75694 1391 aa14.71□□□□□ -0.05
FAM78A-201ENST00000247295 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms