RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 WRNQ14191 1432 aaPredicted RBP eCLIP26.56■■□□□ 1.84
SOX4-201ENST00000244745 WDR43Q15061 677 aaKnown RBP eCLIP26.54■■□□□ 1.84
SOX4-201ENST00000244745 ARXQ96QS3 562 aa26.52■■□□□ 1.84
SOX4-201ENST00000244745 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.52■■□□□ 1.84
SOX4-201ENST00000244745 CEP164Q9UPV0 1460 aa26.5■■□□□ 1.83
SOX4-201ENST00000244745 SUPT16HQ9Y5B9 1047 aaKnown RBP26.48■■□□□ 1.83
SOX4-201ENST00000244745 SENP3-EIF4A1A0A087X0R7 540 aa26.44■■□□□ 1.82
SOX4-201ENST00000244745 TSPY4P0CV99 314 aa26.4■■□□□ 1.82
SOX4-201ENST00000244745 TSPY10P0CW01 314 aa26.4■■□□□ 1.82
SOX4-201ENST00000244745 SIN3AQ96ST3 1273 aa26.39■■□□□ 1.82
SOX4-201ENST00000244745 STAG3Q9UJ98 1225 aa26.32■■□□□ 1.8
SOX4-201ENST00000244745 DDRGK1Q96HY6 314 aa26.31■■□□□ 1.8
SOX4-201ENST00000244745 NACADO15069 1562 aa26.31■■□□□ 1.8
SOX4-201ENST00000244745 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
SOX4-201ENST00000244745 KIF27Q86VH2 1401 aa26.29■■□□□ 1.8
SOX4-201ENST00000244745 SOGA1O94964 1423 aa26.28■■□□□ 1.8
SOX4-201ENST00000244745 RTN4Q9NQC3 1192 aaKnown RBP26.26■■□□□ 1.79
SOX4-201ENST00000244745 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
SOX4-201ENST00000244745 NOP58Q9Y2X3 529 aaKnown RBP26.2■■□□□ 1.78
SOX4-201ENST00000244745 PPP4R2Q9NY27 417 aa26.2■■□□□ 1.78
SOX4-201ENST00000244745 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.78
SOX4-201ENST00000244745 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
SOX4-201ENST00000244745 CCNB3Q8WWL7 1395 aa26.18■■□□□ 1.78
SOX4-201ENST00000244745 RGL3Q3MIN7 710 aa26.17■■□□□ 1.78
SOX4-201ENST00000244745 ESF1Q9H501 851 aaKnown RBP26.17■■□□□ 1.78
SOX4-201ENST00000244745 LAS1LQ9Y4W2 734 aaKnown RBP26.13■■□□□ 1.77
SOX4-201ENST00000244745 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
SOX4-201ENST00000244745 CARD11Q9BXL7 1154 aa26.11■■□□□ 1.77
SOX4-201ENST00000244745 BECN1Q14457 450 aa26.11■■□□□ 1.77
SOX4-201ENST00000244745 PPM1GO15355 546 aaPredicted RBP26.09■■□□□ 1.77
SOX4-201ENST00000244745 DEKP35659 375 aaKnown RBP26.09■■□□□ 1.77
SOX4-201ENST00000244745 B4GALNT3Q6L9W6 998 aa26.08■■□□□ 1.76
SOX4-201ENST00000244745 SENP3Q9H4L4 574 aaPredicted RBP26.07■■□□□ 1.76
SOX4-201ENST00000244745 RBM19Q9Y4C8 960 aaKnown RBP26.07■■□□□ 1.76
SOX4-201ENST00000244745 PLPPR3Q6T4P5 718 aa26.07■■□□□ 1.76
SOX4-201ENST00000244745 NPM1P06748 294 aaKnown RBP eCLIP26.06■■□□□ 1.76
SOX4-201ENST00000244745 TRIM44Q96DX7 344 aaPredicted RBP26.05■■□□□ 1.76
SOX4-201ENST00000244745 MYH16Q9H6N6 1097 aa26.04■■□□□ 1.76
SOX4-201ENST00000244745 CFDP1Q9UEE9 299 aaPredicted RBP26.03■■□□□ 1.76
SOX4-201ENST00000244745 PLEKHD1A6NEE1 506 aa26.02■■□□□ 1.76
SOX4-201ENST00000244745 VPS8Q8N3P4 1428 aa26.02■■□□□ 1.76
SOX4-201ENST00000244745 KNSTRNQ9Y448 316 aa26■■□□□ 1.75
SOX4-201ENST00000244745 KCNH8Q96L42 1107 aa25.99■■□□□ 1.75
SOX4-201ENST00000244745 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
SOX4-201ENST00000244745 SETD5Q9C0A6 1442 aa25.98■■□□□ 1.75
SOX4-201ENST00000244745 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
SOX4-201ENST00000244745 CCER2I3L3R5 266 aa25.96■■□□□ 1.75
SOX4-201ENST00000244745 ERICH6BQ5W0A0 696 aa25.96■■□□□ 1.75
SOX4-201ENST00000244745 KANK4Q5T7N3 995 aaPredicted RBP25.95■■□□□ 1.75
SOX4-201ENST00000244745 NAP1L5Q96NT1 182 aaPredicted RBP25.94■■□□□ 1.74
SOX4-201ENST00000244745 FHAD1B1AJZ9 1412 aa25.94■■□□□ 1.74
SOX4-201ENST00000244745 CC2D1BQ5T0F9 858 aaKnown RBP25.93■■□□□ 1.74
SOX4-201ENST00000244745 TSHZ2Q9NRE2 1034 aa25.93■■□□□ 1.74
SOX4-201ENST00000244745 RGS3P49796 1198 aa25.9■■□□□ 1.74
SOX4-201ENST00000244745 HSPA5P11021 654 aaKnown RBP25.88■■□□□ 1.73
SOX4-201ENST00000244745 CDCA8Q53HL2 280 aa25.88■■□□□ 1.73
SOX4-201ENST00000244745 NEUROD2Q15784 382 aa25.87■■□□□ 1.73
SOX4-201ENST00000244745 CUX2O14529 1486 aa25.87■■□□□ 1.73
SOX4-201ENST00000244745 TIMELESSQ9UNS1 1208 aa25.86■■□□□ 1.73
SOX4-201ENST00000244745 CARMIL1Q5VZK9 1371 aa25.86■■□□□ 1.73
SOX4-201ENST00000244745 CFAP53Q96M91 514 aa25.86■■□□□ 1.73
SOX4-201ENST00000244745 ARHGAP35Q9NRY4 1499 aa25.84■■□□□ 1.73
SOX4-201ENST00000244745 FTSJ3Q8IY81 847 aaKnown RBP25.84■■□□□ 1.73
SOX4-201ENST00000244745 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
SOX4-201ENST00000244745 RAB3GAP2Q9H2M9 1393 aa25.82■■□□□ 1.72
SOX4-201ENST00000244745 NCLP19338 710 aaKnown RBP25.81■■□□□ 1.72
SOX4-201ENST00000244745 GOLGA6L22H0YM25 854 aa25.8■■□□□ 1.72
SOX4-201ENST00000244745 FRAT1Q92837 279 aaPredicted RBP25.79■■□□□ 1.72
SOX4-201ENST00000244745 WIZO95785 1651 aa25.79■■□□□ 1.72
SOX4-201ENST00000244745 DCAF11Q8TEB1 546 aa25.75■■□□□ 1.71
SOX4-201ENST00000244745 TNNT2P45379 298 aaPredicted RBP25.74■■□□□ 1.71
SOX4-201ENST00000244745 FOXD1Q16676 465 aa25.73■■□□□ 1.71
SOX4-201ENST00000244745 ZBTB7CA1YPR0 619 aa25.7■■□□□ 1.7
SOX4-201ENST00000244745 PPP1R15AO75807 674 aaPredicted RBP25.69■■□□□ 1.7
SOX4-201ENST00000244745 PTMAP06454 111 aaKnown RBP25.68■■□□□ 1.7
SOX4-201ENST00000244745 MAPK8IP3Q9UPT6 1336 aa25.67■■□□□ 1.7
SOX4-201ENST00000244745 TMF1P82094 1093 aa25.66■■□□□ 1.7
SOX4-201ENST00000244745 TPRNQ4KMQ1 711 aa25.65■■□□□ 1.7
SOX4-201ENST00000244745 CASC1Q6TDU7 716 aa25.65■■□□□ 1.7
SOX4-201ENST00000244745 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
SOX4-201ENST00000244745 PLEKHG5O94827 1062 aa25.63■■□□□ 1.69
SOX4-201ENST00000244745 DNTTIP2Q5QJE6 756 aaKnown RBP25.63■■□□□ 1.69
SOX4-201ENST00000244745 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.62■■□□□ 1.69
SOX4-201ENST00000244745 C14orf37Q86TY3 774 aa25.61■■□□□ 1.69
SOX4-201ENST00000244745 NUDCQ9Y266 331 aa25.58■■□□□ 1.69
SOX4-201ENST00000244745 HSP90AB1P08238 724 aaKnown RBP25.57■■□□□ 1.68
SOX4-201ENST00000244745 PKD2Q13563 968 aa25.55■■□□□ 1.68
SOX4-201ENST00000244745 L1TD1Q5T7N2 865 aaKnown RBP25.55■■□□□ 1.68
SOX4-201ENST00000244745 MPHOSPH9Q99550 1183 aa25.55■■□□□ 1.68
SOX4-201ENST00000244745 U2SURPO15042 1029 aaKnown RBP25.55■■□□□ 1.68
SOX4-201ENST00000244745 KTN1Q86UP2 1357 aaKnown RBP25.55■■□□□ 1.68
SOX4-201ENST00000244745 SPRYD3Q8NCJ5 442 aa25.52■■□□□ 1.68
SOX4-201ENST00000244745 RAPGEF2Q9Y4G8 1499 aa25.51■■□□□ 1.67
SOX4-201ENST00000244745 RCAN3Q9UKA8 241 aa25.51■■□□□ 1.67
SOX4-201ENST00000244745 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
SOX4-201ENST00000244745 POGKQ9P215 609 aa25.48■■□□□ 1.67
SOX4-201ENST00000244745 MS4A1P11836 297 aa25.48■■□□□ 1.67
SOX4-201ENST00000244745 HSCBQ8IWL3 235 aa25.46■■□□□ 1.67
SOX4-201ENST00000244745 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
SOX4-201ENST00000244745 ROCK2O75116 1388 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms