RNA–Protein interactions for RNA: ENST00000242839.8

ATP7B-201, Transcript of ATPase copper transporting beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP7B, Length 6,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-201ENST00000242839 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
ATP7B-201ENST00000242839 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
ATP7B-201ENST00000242839 NPHP1O15259 732 aa15□□□□□ -0.01
ATP7B-201ENST00000242839 PPM1GO15355 546 aaPredicted RBP15□□□□□ -0.01
ATP7B-201ENST00000242839 PPP1R15AO75807 674 aaPredicted RBP14.98□□□□□ -0.01
ATP7B-201ENST00000242839 MRS2Q9HD23 443 aa14.97□□□□□ -0.01
ATP7B-201ENST00000242839 TRIM44Q96DX7 344 aaPredicted RBP14.97□□□□□ -0.01
ATP7B-201ENST00000242839 LAS1LQ9Y4W2 734 aaKnown RBP14.97□□□□□ -0.01
ATP7B-201ENST00000242839 PTMAP06454 111 aaKnown RBP14.96□□□□□ -0.01
ATP7B-201ENST00000242839 ZRSR1Q15695 479 aaKnown RBP14.95□□□□□ -0.02
ATP7B-201ENST00000242839 CLSTN1O94985 981 aa14.95□□□□□ -0.02
ATP7B-201ENST00000242839 DNTTIP2Q5QJE6 756 aaKnown RBP14.95□□□□□ -0.02
ATP7B-201ENST00000242839 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
ATP7B-201ENST00000242839 PLCB2Q00722 1185 aa14.93□□□□□ -0.02
ATP7B-201ENST00000242839 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
ATP7B-201ENST00000242839 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
ATP7B-201ENST00000242839 NAP1L2Q9ULW6 460 aaPredicted RBP14.9□□□□□ -0.02
ATP7B-201ENST00000242839 KCNH8Q96L42 1107 aa14.88□□□□□ -0.03
ATP7B-201ENST00000242839 RTN4Q9NQC3 1192 aaKnown RBP14.88□□□□□ -0.03
ATP7B-201ENST00000242839 NEUROD2Q15784 382 aa14.87□□□□□ -0.03
ATP7B-201ENST00000242839 RGL3Q3MIN7 710 aa14.85□□□□□ -0.03
ATP7B-201ENST00000242839 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
ATP7B-201ENST00000242839 BECN1Q14457 450 aa14.85□□□□□ -0.03
ATP7B-201ENST00000242839 GOLGA6L22H0YM25 854 aa14.83□□□□□ -0.04
ATP7B-201ENST00000242839 TNNT2P45379 298 aaPredicted RBP14.82□□□□□ -0.04
ATP7B-201ENST00000242839 CASC1Q6TDU7 716 aa14.82□□□□□ -0.04
ATP7B-201ENST00000242839 RRP7BPQ9NSQ0 103 aa14.81□□□□□ -0.04
ATP7B-201ENST00000242839 ISY1Q9ULR0 285 aaKnown RBP14.81□□□□□ -0.04
ATP7B-201ENST00000242839 FTSJ3Q8IY81 847 aaKnown RBP14.81□□□□□ -0.04
ATP7B-201ENST00000242839 TSPY4P0CV99 314 aa14.8□□□□□ -0.04
ATP7B-201ENST00000242839 TSPY10P0CW01 314 aa14.8□□□□□ -0.04
ATP7B-201ENST00000242839 NAP1L5Q96NT1 182 aaPredicted RBP14.8□□□□□ -0.04
ATP7B-201ENST00000242839 OS9Q13438 667 aaPredicted RBP14.79□□□□□ -0.04
ATP7B-201ENST00000242839 DDRGK1Q96HY6 314 aa14.78□□□□□ -0.04
ATP7B-201ENST00000242839 GOLGA2Q08379 1002 aa14.77□□□□□ -0.05
ATP7B-201ENST00000242839 FGD1P98174 961 aa14.76□□□□□ -0.05
ATP7B-201ENST00000242839 SOX12O15370 315 aa14.76□□□□□ -0.05
ATP7B-201ENST00000242839 FRAT1Q92837 279 aaPredicted RBP14.74□□□□□ -0.05
ATP7B-201ENST00000242839 MIER1Q8N108 512 aa14.73□□□□□ -0.05
ATP7B-201ENST00000242839 SPRYD3Q8NCJ5 442 aa14.73□□□□□ -0.05
ATP7B-201ENST00000242839 RGS3P49796 1198 aa14.72□□□□□ -0.05
ATP7B-201ENST00000242839 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
ATP7B-201ENST00000242839 KCNJ4P48050 445 aa14.71□□□□□ -0.05
ATP7B-201ENST00000242839 PRM3Q9NNZ6 103 aa14.7□□□□□ -0.06
ATP7B-201ENST00000242839 HSP90AB1P08238 724 aaKnown RBP14.69□□□□□ -0.06
ATP7B-201ENST00000242839 PDE4CQ08493 712 aa14.69□□□□□ -0.06
ATP7B-201ENST00000242839 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
ATP7B-201ENST00000242839 ERICH6BQ5W0A0 696 aa14.69□□□□□ -0.06
ATP7B-201ENST00000242839 ANO8Q9HCE9 1232 aaPredicted RBP14.69□□□□□ -0.06
ATP7B-201ENST00000242839 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
ATP7B-201ENST00000242839 CC2D1BQ5T0F9 858 aaKnown RBP14.66□□□□□ -0.06
ATP7B-201ENST00000242839 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
ATP7B-201ENST00000242839 EIF4G2P78344 907 aaKnown RBP eCLIP14.66□□□□□ -0.06
ATP7B-201ENST00000242839 GOLGA6L6A8MZA4 724 aa14.65□□□□□ -0.06
ATP7B-201ENST00000242839 U2SURPO15042 1029 aaKnown RBP14.65□□□□□ -0.06
ATP7B-201ENST00000242839 KNSTRNQ9Y448 316 aa14.65□□□□□ -0.06
ATP7B-201ENST00000242839 ARID3AQ99856 593 aa14.65□□□□□ -0.06
ATP7B-201ENST00000242839 POGKQ9P215 609 aa14.64□□□□□ -0.07
ATP7B-201ENST00000242839 SUPT16HQ9Y5B9 1047 aaKnown RBP14.64□□□□□ -0.07
ATP7B-201ENST00000242839 DRC7Q8IY82 874 aa14.63□□□□□ -0.07
ATP7B-201ENST00000242839 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.62□□□□□ -0.07
ATP7B-201ENST00000242839 ZNF330Q9Y3S2 320 aaPredicted RBP14.6□□□□□ -0.07
ATP7B-201ENST00000242839 APBB1O00213 710 aa14.6□□□□□ -0.07
ATP7B-201ENST00000242839 MLECQ14165 292 aa14.6□□□□□ -0.07
ATP7B-201ENST00000242839 ANP32EQ9BTT0 268 aa14.6□□□□□ -0.07
ATP7B-201ENST00000242839 GOLGA6L4A6NEF3 574 aa14.58□□□□□ -0.07
ATP7B-201ENST00000242839 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
ATP7B-201ENST00000242839 SAFB2Q14151 953 aaKnown RBP eCLIP14.57□□□□□ -0.08
ATP7B-201ENST00000242839 GNL2Q13823 731 aaKnown RBP14.57□□□□□ -0.08
ATP7B-201ENST00000242839 SCRIBQ14160 1630 aa14.56□□□□□ -0.08
ATP7B-201ENST00000242839 CARD11Q9BXL7 1154 aa14.56□□□□□ -0.08
ATP7B-201ENST00000242839 NOC3LQ8WTT2 800 aaKnown RBP14.53□□□□□ -0.08
ATP7B-201ENST00000242839 NUDCQ9Y266 331 aa14.52□□□□□ -0.08
ATP7B-201ENST00000242839 PNNQ9H307 717 aaKnown RBP14.5□□□□□ -0.09
ATP7B-201ENST00000242839 FBXO3Q9UK99 471 aa14.5□□□□□ -0.09
ATP7B-201ENST00000242839 CHAF1AQ13111 956 aaPredicted RBP14.48□□□□□ -0.09
ATP7B-201ENST00000242839 PLEKHD1A6NEE1 506 aa14.48□□□□□ -0.09
ATP7B-201ENST00000242839 NRDCO43847 1150 aa14.48□□□□□ -0.09
ATP7B-201ENST00000242839 HSCBQ8IWL3 235 aa14.48□□□□□ -0.09
ATP7B-201ENST00000242839 PAK3O75914 559 aaPredicted RBP14.48□□□□□ -0.09
ATP7B-201ENST00000242839 CCDC9Q9Y3X0 531 aaKnown RBP14.47□□□□□ -0.09
ATP7B-201ENST00000242839 B4GALNT3Q6L9W6 998 aa14.47□□□□□ -0.09
ATP7B-201ENST00000242839 MSNP26038 577 aaKnown RBP14.46□□□□□ -0.09
ATP7B-201ENST00000242839 CREBRFQ8IUR6 639 aa14.46□□□□□ -0.09
ATP7B-201ENST00000242839 KIAA2012Q0VF49 1180 aa14.46□□□□□ -0.1
ATP7B-201ENST00000242839 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
ATP7B-201ENST00000242839 SRPK2P78362 688 aaKnown RBP14.45□□□□□ -0.1
ATP7B-201ENST00000242839 NOP58Q9Y2X3 529 aaKnown RBP14.45□□□□□ -0.1
ATP7B-201ENST00000242839 CDCA8Q53HL2 280 aa14.45□□□□□ -0.1
ATP7B-201ENST00000242839 STK26Q9P289 416 aa14.44□□□□□ -0.1
ATP7B-201ENST00000242839 CHMP3Q9Y3E7 222 aa14.43□□□□□ -0.1
ATP7B-201ENST00000242839 MCCP23508 829 aa14.42□□□□□ -0.1
ATP7B-201ENST00000242839 GZF1Q9H116 711 aaPredicted RBP14.42□□□□□ -0.1
ATP7B-201ENST00000242839 CSB-PGBD3P0DP91 1061 aa14.42□□□□□ -0.1
ATP7B-201ENST00000242839 CFDP1Q9UEE9 299 aaPredicted RBP14.41□□□□□ -0.1
ATP7B-201ENST00000242839 RTF1Q92541 710 aaKnown RBP14.41□□□□□ -0.1
ATP7B-201ENST00000242839 WWC1Q8IX03 1113 aa14.41□□□□□ -0.1
ATP7B-201ENST00000242839 A0A0U1RQG5 324 aaPredicted RBP14.4□□□□□ -0.1
ATP7B-201ENST00000242839 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
ATP7B-201ENST00000242839 SIN3AQ96ST3 1273 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms