RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CHAF1AQ13111 956 aaPredicted RBP10.7□□□□□ -0.7
APOB-201ENST00000233242 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
APOB-201ENST00000233242 LAS1LQ9Y4W2 734 aaKnown RBP10.69□□□□□ -0.7
APOB-201ENST00000233242 RBM19Q9Y4C8 960 aaKnown RBP10.69□□□□□ -0.7
APOB-201ENST00000233242 CCER2I3L3R5 266 aa10.69□□□□□ -0.7
APOB-201ENST00000233242 CHMP4BQ9H444 224 aaKnown RBP10.68□□□□□ -0.7
APOB-201ENST00000233242 NRDCO43847 1150 aa10.68□□□□□ -0.7
APOB-201ENST00000233242 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
APOB-201ENST00000233242 GOLGA6L6A8MZA4 724 aa10.68□□□□□ -0.7
APOB-201ENST00000233242 TIMELESSQ9UNS1 1208 aa10.68□□□□□ -0.7
APOB-201ENST00000233242 ZRSR1Q15695 479 aaKnown RBP10.68□□□□□ -0.7
APOB-201ENST00000233242 PTMSP20962 102 aa10.67□□□□□ -0.7
APOB-201ENST00000233242 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
APOB-201ENST00000233242 ZNF777Q9ULD5 760 aaPredicted RBP10.67□□□□□ -0.7
APOB-201ENST00000233242 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
APOB-201ENST00000233242 ZCCHC6Q5VYS8 1495 aaKnown RBP10.65□□□□□ -0.7
APOB-201ENST00000233242 MS4A1P11836 297 aa10.65□□□□□ -0.7
APOB-201ENST00000233242 MSNP26038 577 aaKnown RBP10.65□□□□□ -0.7
APOB-201ENST00000233242 GOLGA3Q08378 1498 aa10.65□□□□□ -0.71
APOB-201ENST00000233242 CEP162Q5TB80 1403 aa10.64□□□□□ -0.71
APOB-201ENST00000233242 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
APOB-201ENST00000233242 RSF1Q96T23 1441 aaPredicted RBP10.63□□□□□ -0.71
APOB-201ENST00000233242 MYO15BQ96JP2 1530 aa10.62□□□□□ -0.71
APOB-201ENST00000233242 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
APOB-201ENST00000233242 PNNQ9H307 717 aaKnown RBP10.61□□□□□ -0.71
APOB-201ENST00000233242 USP35Q9P2H5 1018 aa10.61□□□□□ -0.71
APOB-201ENST00000233242 TNIKQ9UKE5 1360 aa10.61□□□□□ -0.71
APOB-201ENST00000233242 FTSJ3Q8IY81 847 aaKnown RBP10.6□□□□□ -0.71
APOB-201ENST00000233242 HSCBQ8IWL3 235 aa10.6□□□□□ -0.71
APOB-201ENST00000233242 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
APOB-201ENST00000233242 CFAP53Q96M91 514 aa10.6□□□□□ -0.71
APOB-201ENST00000233242 TSPY4P0CV99 314 aa10.58□□□□□ -0.72
APOB-201ENST00000233242 TSPY10P0CW01 314 aa10.58□□□□□ -0.72
APOB-201ENST00000233242 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
APOB-201ENST00000233242 KNSTRNQ9Y448 316 aa10.58□□□□□ -0.72
APOB-201ENST00000233242 HSP90AB1P08238 724 aaKnown RBP10.57□□□□□ -0.72
APOB-201ENST00000233242 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.723e-36■□□□□ 9.1
APOB-201ENST00000233242 B4GALNT3Q6L9W6 998 aa10.56□□□□□ -0.72
APOB-201ENST00000233242 TSHZ2Q9NRE2 1034 aa10.56□□□□□ -0.72
APOB-201ENST00000233242 GBP4Q96PP9 640 aa10.56□□□□□ -0.72
APOB-201ENST00000233242 CHIC2Q9UKJ5 165 aa10.55□□□□□ -0.72
APOB-201ENST00000233242 RGS3P49796 1198 aa10.55□□□□□ -0.72
APOB-201ENST00000233242 FBLN2P98095 1184 aa10.55□□□□□ -0.72
APOB-201ENST00000233242 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
APOB-201ENST00000233242 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
APOB-201ENST00000233242 ARID4BQ4LE39 1312 aaPredicted RBP10.54□□□□□ -0.72
APOB-201ENST00000233242 IPO9Q96P70 1041 aaKnown RBP10.54□□□□□ -0.72
APOB-201ENST00000233242 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
APOB-201ENST00000233242 CEP164Q9UPV0 1460 aa10.52□□□□□ -0.72
APOB-201ENST00000233242 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.72
APOB-201ENST00000233242 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
APOB-201ENST00000233242 ABCC9O60706 1549 aa10.52□□□□□ -0.73
APOB-201ENST00000233242 CHGAP10645 457 aaKnown RBP10.5□□□□□ -0.73
APOB-201ENST00000233242 ESF1Q9H501 851 aaKnown RBP10.5□□□□□ -0.73
APOB-201ENST00000233242 HSP90AA2PQ14568 343 aaPredicted RBP10.5□□□□□ -0.73
APOB-201ENST00000233242 GOLGA6L3A6NEY3 463 aa10.49□□□□□ -0.73
APOB-201ENST00000233242 SYAP1Q96A49 352 aaPredicted RBP10.49□□□□□ -0.73
APOB-201ENST00000233242 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
APOB-201ENST00000233242 NUDCQ9Y266 331 aa10.48□□□□□ -0.73
APOB-201ENST00000233242 GOLGA6L4A6NEF3 574 aa10.48□□□□□ -0.73
APOB-201ENST00000233242 MCCP23508 829 aa10.48□□□□□ -0.73
APOB-201ENST00000233242 CARD11Q9BXL7 1154 aa10.48□□□□□ -0.73
APOB-201ENST00000233242 RRP7BPQ9NSQ0 103 aa10.47□□□□□ -0.73
APOB-201ENST00000233242 FANCIQ9NVI1 1328 aa10.47□□□□□ -0.73
APOB-201ENST00000233242 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
APOB-201ENST00000233242 CCNB3Q8WWL7 1395 aa10.46□□□□□ -0.73
APOB-201ENST00000233242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.46□□□□□ -0.741e-59■□□□□ 9.2
APOB-201ENST00000233242 TNNT3P45378 269 aaPredicted RBP10.46□□□□□ -0.74
APOB-201ENST00000233242 MAPK8IP3Q9UPT6 1336 aa10.45□□□□□ -0.74
APOB-201ENST00000233242 HAP1P54257 671 aaPredicted RBP10.44□□□□□ -0.74
APOB-201ENST00000233242 DRC7Q8IY82 874 aa10.42□□□□□ -0.74
APOB-201ENST00000233242 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.42□□□□□ -0.74
APOB-201ENST00000233242 FRAT1Q92837 279 aaPredicted RBP10.42□□□□□ -0.74
APOB-201ENST00000233242 RCAN3Q9UKA8 241 aa10.41□□□□□ -0.74
APOB-201ENST00000233242 PDE3BQ13370 1112 aa10.41□□□□□ -0.74
APOB-201ENST00000233242 RALBP1Q15311 655 aa10.41□□□□□ -0.74
APOB-201ENST00000233242 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
APOB-201ENST00000233242 DDX11L8A8MPP1 907 aa10.41□□□□□ -0.74
APOB-201ENST00000233242 PHF14O94880 888 aa10.41□□□□□ -0.74
APOB-201ENST00000233242 HTATSF1O43719 755 aaKnown RBP10.4□□□□□ -0.74
APOB-201ENST00000233242 IPO8O15397 1037 aaKnown RBP10.4□□□□□ -0.74
APOB-201ENST00000233242 RWDD1Q9H446 243 aaPredicted RBP10.4□□□□□ -0.74
APOB-201ENST00000233242 KIF27Q86VH2 1401 aa10.4□□□□□ -0.74
APOB-201ENST00000233242 SETD5Q9C0A6 1442 aa10.39□□□□□ -0.75
APOB-201ENST00000233242 FGD1P98174 961 aa10.39□□□□□ -0.75
APOB-201ENST00000233242 WRNQ14191 1432 aaPredicted RBP eCLIP10.39□□□□□ -0.75
APOB-201ENST00000233242 KTN1Q86UP2 1357 aaKnown RBP10.38□□□□□ -0.75
APOB-201ENST00000233242 SKOR2Q2VWA4 1001 aaPredicted RBP10.37□□□□□ -0.75
APOB-201ENST00000233242 TMF1P82094 1093 aa10.37□□□□□ -0.75
APOB-201ENST00000233242 GSE1Q14687 1217 aa10.37□□□□□ -0.75
APOB-201ENST00000233242 KCNJ4P48050 445 aa10.37□□□□□ -0.75
APOB-201ENST00000233242 SIN3AQ96ST3 1273 aa10.37□□□□□ -0.75
APOB-201ENST00000233242 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
APOB-201ENST00000233242 SLKQ9H2G2 1235 aaPredicted RBP10.36□□□□□ -0.75
APOB-201ENST00000233242 PHLDB1Q86UU1 1377 aa10.36□□□□□ -0.75
APOB-201ENST00000233242 PMFBP1Q8TBY8 1022 aa10.36□□□□□ -0.75
APOB-201ENST00000233242 GOLGA6L1Q8N7Z2 621 aa10.35□□□□□ -0.75
APOB-201ENST00000233242 GZF1Q9H116 711 aaPredicted RBP10.35□□□□□ -0.75
APOB-201ENST00000233242 ROCK2O75116 1388 aaKnown RBP10.35□□□□□ -0.75
APOB-201ENST00000233242 VPS8Q8N3P4 1428 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms