RNA–Protein interactions for RNA: ENSMUST00000190949.1

Gm28979-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28979, Length 1,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28979-201ENSMUST00000190949 Repin1Q5U4E2 545 aa16.4■□□□□ 0.22
Gm28979-201ENSMUST00000190949 Hdac5Q9Z2V6 1113 aa16.38■□□□□ 0.21
Gm28979-201ENSMUST00000190949 Ecm2Q5FW85 670 aa16.37■□□□□ 0.21
Gm28979-201ENSMUST00000190949 Zbtb7bQ64321 544 aa16.34■□□□□ 0.21
Gm28979-201ENSMUST00000190949 Fam117bQ3U3E2 584 aa16.32■□□□□ 0.2
Gm28979-201ENSMUST00000190949 Ehmt2Q9Z148 1263 aaKnown RBP16.32■□□□□ 0.2
Gm28979-201ENSMUST00000190949 Atad2Q8CDM1 1040 aa16.26■□□□□ 0.19
Gm28979-201ENSMUST00000190949 Znf710Q3U288 666 aa16.24■□□□□ 0.19
Gm28979-201ENSMUST00000190949 Rb1cc1Q9ESK9 1588 aa16.2■□□□□ 0.18
Gm28979-201ENSMUST00000190949 Gm13697A2AK42 830 aa16.18■□□□□ 0.18
Gm28979-201ENSMUST00000190949 Pdap1Q3UHX2 181 aaKnown RBP16.16■□□□□ 0.18
Gm28979-201ENSMUST00000190949 Thoc2B1AZI6 1594 aaKnown RBP16.08■□□□□ 0.16
Gm28979-201ENSMUST00000190949 Evx2P49749 475 aa16.07■□□□□ 0.16
Gm28979-201ENSMUST00000190949 Spock2Q9ER58 423 aa16.05■□□□□ 0.16
Gm28979-201ENSMUST00000190949 Fxr2Q9WVR4 673 aaKnown RBP16.04■□□□□ 0.16
Gm28979-201ENSMUST00000190949 Ppp6r1Q7TSI3 856 aa16.04■□□□□ 0.16
Gm28979-201ENSMUST00000190949 Pds5bQ4VA53 1446 aaKnown RBP16.02■□□□□ 0.16
Gm28979-201ENSMUST00000190949 Znf516Q7TSH3 1157 aa15.99■□□□□ 0.15
Gm28979-201ENSMUST00000190949 Ndufv2Q9D6J6 248 aa15.99■□□□□ 0.15
Gm28979-201ENSMUST00000190949 TMEM121BQ99MX7 572 aa15.97■□□□□ 0.15
Gm28979-201ENSMUST00000190949 Gm45233A0A0N4SVE0 221 aa15.95■□□□□ 0.14
Gm28979-201ENSMUST00000190949 OsbpQ3B7Z2 805 aa15.94■□□□□ 0.14
Gm28979-201ENSMUST00000190949 Baz1aO88379 1555 aa15.92■□□□□ 0.14
Gm28979-201ENSMUST00000190949 Ferd3lQ923Z4 168 aa15.86■□□□□ 0.13
Gm28979-201ENSMUST00000190949 Tulp1Q9Z273 543 aa15.84■□□□□ 0.13
Gm28979-201ENSMUST00000190949 Atad2bE9Q166 1460 aaKnown RBP15.83■□□□□ 0.13
Gm28979-201ENSMUST00000190949 Crybg2B7ZCC2 1516 aa15.82■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Chrm1P12657 460 aa15.82■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Cc2d2aQ8CFW7 1633 aa15.82■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Kiaa1522A2A7S8 1013 aa15.81■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Dmrta2A2A9A2 531 aa15.81■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Rhox8Q6VSS7 320 aa15.81■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Prdm10Q3UTQ7 1184 aa15.79■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Znf579Q80VM4 562 aa15.78■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Zcchc6Q5BLK4 1491 aaKnown RBP15.78■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Prim1P20664 417 aa15.78■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Bclaf1Q8K019 919 aaKnown RBP15.78■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Ccdc180J3QNE4 1664 aa15.77■□□□□ 0.12
Gm28979-201ENSMUST00000190949 Arhgef1Q61210 920 aaKnown RBP15.75■□□□□ 0.11
Gm28979-201ENSMUST00000190949 Kank4Q6P9J5 1016 aa15.75■□□□□ 0.11
Gm28979-201ENSMUST00000190949 TimelessQ9R1X4 1197 aa15.75■□□□□ 0.11
Gm28979-201ENSMUST00000190949 Pcdhb17Q91VD8 799 aa15.73■□□□□ 0.11
Gm28979-201ENSMUST00000190949 Zbtb22Q9Z0G7 638 aa15.7■□□□□ 0.1
Gm28979-201ENSMUST00000190949 Ercc6F8VPZ5 1481 aa15.7■□□□□ 0.1
Gm28979-201ENSMUST00000190949 Smarca2Q6DIC0 1577 aa15.67■□□□□ 0.1
Gm28979-201ENSMUST00000190949 Fam135aQ6NS59 1506 aa15.62■□□□□ 0.09
Gm28979-201ENSMUST00000190949 Smarca4Q3TKT4 1613 aaKnown RBP15.62■□□□□ 0.09
Gm28979-201ENSMUST00000190949 Iqgap2Q3UQ44 1575 aa15.6■□□□□ 0.09
Gm28979-201ENSMUST00000190949 Cecr2E9Q2Z1 1453 aa15.59■□□□□ 0.09
Gm28979-201ENSMUST00000190949 Pak3Q61036 559 aa15.54■□□□□ 0.08
Gm28979-201ENSMUST00000190949 Jph4Q80WT0 628 aa15.53■□□□□ 0.08
Gm28979-201ENSMUST00000190949 Wdr62Q3U3T8 1523 aa15.51■□□□□ 0.07
Gm28979-201ENSMUST00000190949 Frmpd1A2AKB4 1549 aa15.5■□□□□ 0.07
Gm28979-201ENSMUST00000190949 ZxdbA2CE44 873 aa15.5■□□□□ 0.07
Gm28979-201ENSMUST00000190949 Stk3Q9JI10 497 aa15.5■□□□□ 0.07
Gm28979-201ENSMUST00000190949 Slc4a2P13808 1237 aaKnown RBP15.49■□□□□ 0.07
Gm28979-201ENSMUST00000190949 E9Q0B3 247 aa15.45■□□□□ 0.06
Gm28979-201ENSMUST00000190949 C1qbpO35658 278 aa15.43■□□□□ 0.06
Gm28979-201ENSMUST00000190949 Rnf225Q9D7D1 332 aa15.43■□□□□ 0.06
Gm28979-201ENSMUST00000190949 Phldb1Q6PDH0 1371 aaKnown RBP15.42■□□□□ 0.06
Gm28979-201ENSMUST00000190949 Dcbld2Q91ZV3 769 aa15.42■□□□□ 0.06
Gm28979-201ENSMUST00000190949 Rgl2Q61193 778 aa15.38■□□□□ 0.05
Gm28979-201ENSMUST00000190949 Evi5P97366 809 aa15.37■□□□□ 0.05
Gm28979-201ENSMUST00000190949 Lhx8O35652 367 aa15.35■□□□□ 0.05
Gm28979-201ENSMUST00000190949 Ubl4bQ9CQ84 188 aa15.31■□□□□ 0.04
Gm28979-201ENSMUST00000190949 Unc13aQ4KUS2 1712 aa15.31■□□□□ 0.04
Gm28979-201ENSMUST00000190949 Baz1bQ9Z277 1479 aa15.27■□□□□ 0.04
Gm28979-201ENSMUST00000190949 Fam181bQ80VF6 417 aa15.27■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Rsph6aQ8CDR2 708 aa15.26■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Mrc2Q64449 1479 aa15.26■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Stk24Q99KH8 431 aa15.25■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Fkbp4P30416 458 aa15.22■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Actn4P57780 912 aaKnown RBP15.22■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Stk25Q9Z2W1 426 aa15.22■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Scnn1bQ9WU38 638 aa15.21■□□□□ 0.03
Gm28979-201ENSMUST00000190949 Mier1Q5UAK0 511 aa15.19■□□□□ 0.02
Gm28979-201ENSMUST00000190949 Pdzrn4E9PUZ9 1014 aa15.18■□□□□ 0.02
Gm28979-201ENSMUST00000190949 UncxO08934 530 aa15.18■□□□□ 0.02
Gm28979-201ENSMUST00000190949 Nap1l5Q9JJF0 156 aa15.18■□□□□ 0.02
Gm28979-201ENSMUST00000190949 St18Q80TY4 1045 aa15.17■□□□□ 0.02
Gm28979-201ENSMUST00000190949 Dnajc5P60904 198 aa15.16■□□□□ 0.02
Gm28979-201ENSMUST00000190949 Axin1O35625 863 aa15.14■□□□□ 0.01
Gm28979-201ENSMUST00000190949 Fndc3aQ8BX90 1198 aa15.14■□□□□ 0.01
Gm28979-201ENSMUST00000190949 CftrP26361 1476 aa15.11■□□□□ 0.01
Gm28979-201ENSMUST00000190949 Synj1Q8CHC4 1574 aa15.09■□□□□ 0.01
Gm28979-201ENSMUST00000190949 Cttnbp2B9EJA2 1648 aa15.07■□□□□ 0
Gm28979-201ENSMUST00000190949 Tox2A2A472 547 aa15.07■□□□□ 0
Gm28979-201ENSMUST00000190949 Dkk1O54908 272 aa15.06■□□□□ 0
Gm28979-201ENSMUST00000190949 Ankrd65F6YK91 380 aa15.05■□□□□ -0
Gm28979-201ENSMUST00000190949 Cypt1Q8CH20 168 aa15.02■□□□□ -0
Gm28979-201ENSMUST00000190949 CatipB9EKE5 520 aa15.02□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Skap1Q3UUV5 355 aa15.02□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Slc24a1Q91WD8 1130 aa15.02□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Noa1Q9JJG9 693 aaKnown RBP15.01□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Krtap4-1Q3UUY3 169 aa14.99□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Otop3Q80UF9 577 aa14.99□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Lrriq1Q0P5X1 1673 aa14.98□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Apba1B2RUJ5 842 aa14.97□□□□□ -0.01
Gm28979-201ENSMUST00000190949 Sgip1Q8VD37 806 aa14.95□□□□□ -0.02
Gm28979-201ENSMUST00000190949 Brd4Q9ESU6 1400 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms