RNA–Protein interactions for RNA: ENSMUST00000164052.4

Vps50-202, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 4,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-202ENSMUST00000164052 Sycp2Q9CUU3 1500 aa7.59□□□□□ -1.19
Vps50-202ENSMUST00000164052 Brd4Q9ESU6 1400 aaKnown RBP7.57□□□□□ -1.2
Vps50-202ENSMUST00000164052 Phldb1Q6PDH0 1371 aaKnown RBP7.57□□□□□ -1.2
Vps50-202ENSMUST00000164052 Pak3Q61036 559 aa7.56□□□□□ -1.2
Vps50-202ENSMUST00000164052 Pdcl3Q8BVF2 240 aa7.56□□□□□ -1.2
Vps50-202ENSMUST00000164052 Phf23Q8BSN5 401 aa7.55□□□□□ -1.2
Vps50-202ENSMUST00000164052 Eid3Q3V124 375 aa7.55□□□□□ -1.2
Vps50-202ENSMUST00000164052 Atad2bE9Q166 1460 aaKnown RBP7.55□□□□□ -1.2
Vps50-202ENSMUST00000164052 Ccdc88bQ4QRL3 1481 aa7.55□□□□□ -1.2
Vps50-202ENSMUST00000164052 CatipB9EKE5 520 aa7.53□□□□□ -1.2
Vps50-202ENSMUST00000164052 Rpap1Q80TE0 1409 aa7.52□□□□□ -1.21
Vps50-202ENSMUST00000164052 Golga3P55937 1487 aa7.52□□□□□ -1.21
Vps50-202ENSMUST00000164052 BccipQ9CWI3 316 aa7.52□□□□□ -1.21
Vps50-202ENSMUST00000164052 Baz1bQ9Z277 1479 aa7.51□□□□□ -1.21
Vps50-202ENSMUST00000164052 Ccer2J3QPU5 274 aa7.51□□□□□ -1.21
Vps50-202ENSMUST00000164052 Tcerg1Q8CGF7 1100 aaKnown RBP7.51□□□□□ -1.21
Vps50-202ENSMUST00000164052 Plekhg3Q4VAC9 1341 aa7.51□□□□□ -1.21
Vps50-202ENSMUST00000164052 AU015836B2RUM3 263 aa7.5□□□□□ -1.21
Vps50-202ENSMUST00000164052 Gtf2a1Q99PM3 378 aa7.5□□□□□ -1.21
Vps50-202ENSMUST00000164052 Liat1Q810M6 228 aa7.5□□□□□ -1.21
Vps50-202ENSMUST00000164052 Gm13697A2AK42 830 aa7.49□□□□□ -1.21
Vps50-202ENSMUST00000164052 Pabpn1Q8CCS6 302 aaKnown RBP7.49□□□□□ -1.21
Vps50-202ENSMUST00000164052 Iqcf3Q9D498 203 aa7.49□□□□□ -1.21
Vps50-202ENSMUST00000164052 Clip1Q922J3 1391 aa7.49□□□□□ -1.21
Vps50-202ENSMUST00000164052 Dnttip2Q8R2M2 758 aaKnown RBP7.48□□□□□ -1.21
Vps50-202ENSMUST00000164052 Gtf3c5Q8R2T8 520 aa7.48□□□□□ -1.21
Vps50-202ENSMUST00000164052 Egfem1Q8C088 590 aa7.48□□□□□ -1.21
Vps50-202ENSMUST00000164052 Rrp9Q91WM3 475 aaKnown RBP7.48□□□□□ -1.21
Vps50-202ENSMUST00000164052 Rtn4Q99P72 1162 aaKnown RBP7.48□□□□□ -1.21
Vps50-202ENSMUST00000164052 Ncapd3Q6ZQK0 1506 aa7.47□□□□□ -1.21
Vps50-202ENSMUST00000164052 AampJ3QN89 436 aa7.46□□□□□ -1.21
Vps50-202ENSMUST00000164052 Znf316Q6PGE4 1016 aa7.46□□□□□ -1.22
Vps50-202ENSMUST00000164052 Taok2Q6ZQ29 1240 aa7.46□□□□□ -1.22
Vps50-202ENSMUST00000164052 Smg6P61406 1418 aaKnown RBP7.45□□□□□ -1.22
Vps50-202ENSMUST00000164052 Smarca2Q6DIC0 1577 aa7.44□□□□□ -1.22
Vps50-202ENSMUST00000164052 Slc4a3P16283 1227 aa7.44□□□□□ -1.22
Vps50-202ENSMUST00000164052 Ccdc18Q640L5 1455 aa7.44□□□□□ -1.22
Vps50-202ENSMUST00000164052 DmtnQ9WV69 405 aa7.43□□□□□ -1.22
Vps50-202ENSMUST00000164052 Kif15Q6P9L6 1387 aa7.43□□□□□ -1.22
Vps50-202ENSMUST00000164052 Mrs2Q5NCE8 434 aa7.43□□□□□ -1.22
Vps50-202ENSMUST00000164052 CanxP35564 591 aaKnown RBP7.42□□□□□ -1.22
Vps50-202ENSMUST00000164052 P3h3Q8CG70 732 aa7.42□□□□□ -1.22
Vps50-202ENSMUST00000164052 Crybg2B7ZCC2 1516 aa7.42□□□□□ -1.22
Vps50-202ENSMUST00000164052 Zfp777B9EKF4 885 aa7.42□□□□□ -1.22
Vps50-202ENSMUST00000164052 Rapgef2Q8CHG7 1496 aa7.41□□□□□ -1.22
Vps50-202ENSMUST00000164052 ScribQ80U72 1612 aa7.41□□□□□ -1.22
Vps50-202ENSMUST00000164052 Anp32bQ9EST5 272 aaKnown RBP7.41□□□□□ -1.22
Vps50-202ENSMUST00000164052 Kcnn1Q9EQR3 537 aa7.4□□□□□ -1.22
Vps50-202ENSMUST00000164052 ChgaP26339 463 aaKnown RBP7.4□□□□□ -1.23
Vps50-202ENSMUST00000164052 Safb2Q80YR5 991 aaKnown RBP7.4□□□□□ -1.23
Vps50-202ENSMUST00000164052 Cep162Q6ZQ06 1403 aa7.39□□□□□ -1.23
Vps50-202ENSMUST00000164052 Ythdc1E9Q5K9 736 aaKnown RBP7.39□□□□□ -1.23
Vps50-202ENSMUST00000164052 UacaQ8CGB3 1411 aa7.37□□□□□ -1.23
Vps50-202ENSMUST00000164052 Mre11Q61216 706 aa7.36□□□□□ -1.23
Vps50-202ENSMUST00000164052 Fam50aQ9WV03 339 aaKnown RBP7.36□□□□□ -1.23
Vps50-202ENSMUST00000164052 Ppp1r18Q8BQ30 594 aa7.36□□□□□ -1.23
Vps50-202ENSMUST00000164052 4933402E13RikQ9D4D2 429 aa7.36□□□□□ -1.23
Vps50-202ENSMUST00000164052 Ppm1gQ61074 542 aa7.35□□□□□ -1.23
Vps50-202ENSMUST00000164052 Sin3aQ60520 1274 aaKnown RBP7.34□□□□□ -1.23
Vps50-202ENSMUST00000164052 Ofd1Q80Z25 1017 aa7.34□□□□□ -1.23
Vps50-202ENSMUST00000164052 Dnai1Q8C0M8 701 aa7.34□□□□□ -1.23
Vps50-202ENSMUST00000164052 4930567H17RikQ3V0K5 233 aa7.34□□□□□ -1.24
Vps50-202ENSMUST00000164052 Zbtb4Q5F293 982 aa7.34□□□□□ -1.24
Vps50-202ENSMUST00000164052 Eea1Q8BL66 1411 aa7.33□□□□□ -1.24
Vps50-202ENSMUST00000164052 Htatsf1Q8BGC0 757 aa7.33□□□□□ -1.24
Vps50-202ENSMUST00000164052 Znf692Q3U381 531 aa7.32□□□□□ -1.24
Vps50-202ENSMUST00000164052 Gm13695A2AK44 830 aa7.32□□□□□ -1.24
Vps50-202ENSMUST00000164052 Sart3Q9JLI8 962 aaKnown RBP7.32□□□□□ -1.24
Vps50-202ENSMUST00000164052 Phf14Q9D4H9 881 aa7.31□□□□□ -1.24
Vps50-202ENSMUST00000164052 Kif20aP97329 887 aa7.31□□□□□ -1.24
Vps50-202ENSMUST00000164052 NgefQ8CHT1 710 aa7.31□□□□□ -1.24
Vps50-202ENSMUST00000164052 Mrc2Q64449 1479 aa7.31□□□□□ -1.24
Vps50-202ENSMUST00000164052 Rrp12Q6P5B0 1295 aaKnown RBP7.31□□□□□ -1.24
Vps50-202ENSMUST00000164052 Arhgap27A2AB59 869 aa7.3□□□□□ -1.24
Vps50-202ENSMUST00000164052 Armcx1Q9CX83 456 aa7.3□□□□□ -1.24
Vps50-202ENSMUST00000164052 Hspa5P20029 655 aaKnown RBP7.29□□□□□ -1.24
Vps50-202ENSMUST00000164052 Fyco1Q8VDC1 1437 aa7.28□□□□□ -1.24
Vps50-202ENSMUST00000164052 Smarca4Q3TKT4 1613 aaKnown RBP7.28□□□□□ -1.24
Vps50-202ENSMUST00000164052 Ankrd36D3Z4K0 1415 aa7.28□□□□□ -1.24
Vps50-202ENSMUST00000164052 Wwc2Q6NXJ0 1187 aa7.27□□□□□ -1.24
Vps50-202ENSMUST00000164052 Exoc6Q8R313 802 aa7.27□□□□□ -1.24
Vps50-202ENSMUST00000164052 Rbm10Q99KG3 930 aaKnown RBP7.27□□□□□ -1.24
Vps50-202ENSMUST00000164052 Cux2P70298 1426 aa7.27□□□□□ -1.25
Vps50-202ENSMUST00000164052 Tnnt2P50752 301 aa7.27□□□□□ -1.25
Vps50-202ENSMUST00000164052 Slc4a2P13808 1237 aaKnown RBP7.27□□□□□ -1.25
Vps50-202ENSMUST00000164052 CntlnA2AM05 1397 aa7.26□□□□□ -1.25
Vps50-202ENSMUST00000164052 Zbtb7cQ8VCZ7 619 aa7.26□□□□□ -1.25
Vps50-202ENSMUST00000164052 Dusp27Q148W8 1138 aa7.26□□□□□ -1.25
Vps50-202ENSMUST00000164052 Prkrip1Q9CWV6 186 aaKnown RBP7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 Kdm5bQ80Y84 1544 aa7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 Fhad1A6PWD2 1420 aa7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 Tpm2P58774 284 aa7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 Fam43aQ8BUP8 424 aa7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 Trim44Q9QXA7 346 aa7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 Senp3Q9EP97 568 aaKnown RBP7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 Camsap2Q8C1B1 1461 aa7.25□□□□□ -1.25
Vps50-202ENSMUST00000164052 TimelessQ9R1X4 1197 aa7.24□□□□□ -1.25
Vps50-202ENSMUST00000164052 Mbd3Q9Z2D8 285 aaKnown RBP7.24□□□□□ -1.25
Vps50-202ENSMUST00000164052 Ncoa2Q61026 1462 aa7.24□□□□□ -1.25
Vps50-202ENSMUST00000164052 Mia2Q91ZV0 1396 aa7.24□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 122 ms