RNA–Protein interactions for RNA: ENSMUST00000163559.7

Ccr9-202, Transcript of C-C chemokine receptor type 9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccr9, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9-202ENSMUST00000163559 Grin2bQ01097 1482 aa22.36■■□□□ 1.17
Ccr9-202ENSMUST00000163559 Unc13aQ4KUS2 1712 aa22.35■■□□□ 1.17
Ccr9-202ENSMUST00000163559 Naip1Q9QWK5 1403 aa22.31■■□□□ 1.16
Ccr9-202ENSMUST00000163559 Mroh2bQ7M6Y6 1581 aa22.3■■□□□ 1.16
Ccr9-202ENSMUST00000163559 Cux2P70298 1426 aa22.3■■□□□ 1.16
Ccr9-202ENSMUST00000163559 Tiam1Q60610 1591 aa22.27■■□□□ 1.16
Ccr9-202ENSMUST00000163559 Map3k1P53349 1493 aa22.26■■□□□ 1.15
Ccr9-202ENSMUST00000163559 NclP09405 707 aaKnown RBP22.26■■□□□ 1.15
Ccr9-202ENSMUST00000163559 Kdm5bQ80Y84 1544 aa22.24■■□□□ 1.15
Ccr9-202ENSMUST00000163559 Ube2uB1AUC4 352 aa22.23■■□□□ 1.15
Ccr9-202ENSMUST00000163559 Ankrd26Q811D2 1581 aa22.23■■□□□ 1.15
Ccr9-202ENSMUST00000163559 Slx4Q6P1D7 1565 aa22.22■■□□□ 1.15
Ccr9-202ENSMUST00000163559 Pcf11G3X9Z4 1553 aa22.2■■□□□ 1.14
Ccr9-202ENSMUST00000163559 Hspa5P20029 655 aaKnown RBP22.16■■□□□ 1.14
Ccr9-202ENSMUST00000163559 Cux1P53564 1515 aa22.15■■□□□ 1.14
Ccr9-202ENSMUST00000163559 Phldb1Q6PDH0 1371 aaKnown RBP22.14■■□□□ 1.14
Ccr9-202ENSMUST00000163559 Chic2Q9D9G3 165 aa22.12■■□□□ 1.13
Ccr9-202ENSMUST00000163559 LrpprcQ6PB66 1392 aaKnown RBP22.1■■□□□ 1.13
Ccr9-202ENSMUST00000163559 3425401B19RikD3Z1D3 1412 aa22.08■■□□□ 1.13
Ccr9-202ENSMUST00000163559 Carmil1Q6EDY6 1374 aa22.08■■□□□ 1.12
Ccr9-202ENSMUST00000163559 Aebp1Q640N1 1128 aa22.08■■□□□ 1.12
Ccr9-202ENSMUST00000163559 Duox2A2AQ99 1517 aa22.06■■□□□ 1.12
Ccr9-202ENSMUST00000163559 Hnrnpul2Q00PI9 745 aaKnown RBP22.05■■□□□ 1.12
Ccr9-202ENSMUST00000163559 Erich3F6QRE9 1637 aa22.04■■□□□ 1.12
Ccr9-202ENSMUST00000163559 CntlnA2AM05 1397 aa22.03■■□□□ 1.12
Ccr9-202ENSMUST00000163559 Rad54l2Q99NG0 1466 aa22.02■■□□□ 1.12
Ccr9-202ENSMUST00000163559 Efcab5A0JP43 1406 aa22.01■■□□□ 1.11
Ccr9-202ENSMUST00000163559 SafbD3YXK2 937 aaKnown RBP22■■□□□ 1.11
Ccr9-202ENSMUST00000163559 Aplp2Q06335 707 aa21.99■■□□□ 1.11
Ccr9-202ENSMUST00000163559 PogzQ8BZH4 1409 aaKnown RBP21.99■■□□□ 1.11
Ccr9-202ENSMUST00000163559 TchhA0A0B4J1F9 1599 aa21.95■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Lmo7E9PYF4 1699 aaKnown RBP21.95■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Slc24a1Q91WD8 1130 aa21.95■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Sin3aQ60520 1274 aaKnown RBP21.94■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Fyco1Q8VDC1 1437 aa21.94■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Dhx29Q6PGC1 1365 aaKnown RBP21.93■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Rpap1Q80TE0 1409 aa21.91■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Urb2E9Q7L1 1524 aaKnown RBP21.9■■□□□ 1.1
Ccr9-202ENSMUST00000163559 CenpbP27790 599 aa21.9■■□□□ 1.1
Ccr9-202ENSMUST00000163559 Samd9lQ69Z37 1561 aa21.89■■□□□ 1.09
Ccr9-202ENSMUST00000163559 Gm7298A0A0N4SVU1 1476 aa21.85■■□□□ 1.09
Ccr9-202ENSMUST00000163559 Gm1043A0A140LJC2 1431 aa21.84■■□□□ 1.09
Ccr9-202ENSMUST00000163559 Thoc2B1AZI6 1594 aaKnown RBP21.83■■□□□ 1.09
Ccr9-202ENSMUST00000163559 Ccnb3Q810T2 1396 aa21.83■■□□□ 1.08
Ccr9-202ENSMUST00000163559 Mia2Q91ZV0 1396 aa21.82■■□□□ 1.08
Ccr9-202ENSMUST00000163559 SynmQ70IV5 1561 aa21.82■■□□□ 1.08
Ccr9-202ENSMUST00000163559 Fhad1A6PWD2 1420 aa21.82■■□□□ 1.08
Ccr9-202ENSMUST00000163559 Naip2Q9QUK4 1447 aa21.78■■□□□ 1.08
Ccr9-202ENSMUST00000163559 A2mQ6GQT1 1474 aa21.78■■□□□ 1.08
Ccr9-202ENSMUST00000163559 Ccer2J3QPU5 274 aa21.77■■□□□ 1.08
Ccr9-202ENSMUST00000163559 Vps8Q0P5W1 1427 aa21.75■■□□□ 1.07
Ccr9-202ENSMUST00000163559 Gm13697A2AK42 830 aa21.74■■□□□ 1.07
Ccr9-202ENSMUST00000163559 Kif27Q7M6Z4 1394 aa21.71■■□□□ 1.07
Ccr9-202ENSMUST00000163559 UacaQ8CGB3 1411 aa21.7■■□□□ 1.06
Ccr9-202ENSMUST00000163559 Tnnt3Q9QZ47 272 aa21.7■■□□□ 1.06
Ccr9-202ENSMUST00000163559 EprsQ8CGC7 1512 aaKnown RBP21.69■■□□□ 1.06
Ccr9-202ENSMUST00000163559 Znf710Q3U288 666 aa21.69■■□□□ 1.06
Ccr9-202ENSMUST00000163559 Ankrd36D3Z4K0 1415 aa21.69■■□□□ 1.06
Ccr9-202ENSMUST00000163559 Zfp644E9QA22 1323 aa21.69■■□□□ 1.06
Ccr9-202ENSMUST00000163559 Cabp1Q9JLK7 227 aa21.67■■□□□ 1.06
Ccr9-202ENSMUST00000163559 CadpsQ80TJ1 1355 aa21.66■■□□□ 1.06
Ccr9-202ENSMUST00000163559 Peg3Q3URU2 1571 aa21.64■■□□□ 1.06
Ccr9-202ENSMUST00000163559 Mphosph9A6H5Y1 991 aa21.64■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Fam135aQ6NS59 1506 aa21.64■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Gpatch8A2A6A1 1505 aa21.63■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Polr1aO35134 1717 aaKnown RBP21.62■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Pla2r1Q62028 1487 aa21.62■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Dnajc5bQ9CQ94 199 aa21.62■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Crocc2F6XLV1 1638 aa21.61■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Dennd4bQ3U1Y4 1499 aa21.61■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Stra8P70278 393 aa21.6■■□□□ 1.05
Ccr9-202ENSMUST00000163559 Fam71e1A1L3C1 212 aa21.57■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Kif21aQ9QXL2 1672 aa21.57■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Eif5bQ05D44 1216 aaKnown RBP21.57■■□□□ 1.04
Ccr9-202ENSMUST00000163559 NexmifQ5DTT1 1515 aa21.56■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Naip5Q9R016 1403 aa21.56■■□□□ 1.04
Ccr9-202ENSMUST00000163559 BC005561E9Q5E2 1589 aa21.55■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Plb1Q3TTY0 1478 aa21.54■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Arhgap27A2AB59 869 aa21.54■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Magi3Q9EQJ9 1476 aa21.52■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Pkd2O35245 966 aa21.52■■□□□ 1.04
Ccr9-202ENSMUST00000163559 Grin2aP35436 1464 aa21.51■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Ncoa2Q61026 1462 aa21.51■■□□□ 1.03
Ccr9-202ENSMUST00000163559 WrnO09053 1401 aa21.5■■□□□ 1.03
Ccr9-202ENSMUST00000163559 WizO88286 1684 aaKnown RBP21.5■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Smg6P61406 1418 aaKnown RBP21.49■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Fkbp15Q6P9Q6 1216 aaKnown RBP21.48■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Zbtb7cQ8VCZ7 619 aa21.47■■□□□ 1.03
Ccr9-202ENSMUST00000163559 PxdnQ3UQ28 1475 aa21.47■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Lmtk2Q3TYD6 1471 aa21.46■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Mrs2Q5NCE8 434 aa21.46■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Wwc2Q6NXJ0 1187 aa21.46■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Usp47Q8BY87 1376 aa21.46■■□□□ 1.03
Ccr9-202ENSMUST00000163559 Calr4Q3TQS0 420 aa21.44■■□□□ 1.02
Ccr9-202ENSMUST00000163559 Mrc2Q64449 1479 aa21.43■■□□□ 1.02
Ccr9-202ENSMUST00000163559 P3h3Q8CG70 732 aa21.42■■□□□ 1.02
Ccr9-202ENSMUST00000163559 Abca5Q8K448 1642 aa21.42■■□□□ 1.02
Ccr9-202ENSMUST00000163559 Rgl3Q3UYI5 709 aa21.42■■□□□ 1.02
Ccr9-202ENSMUST00000163559 Disp1Q3TDN0 1521 aa21.41■■□□□ 1.02
Ccr9-202ENSMUST00000163559 Ncoa3O09000 1398 aa21.41■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms