RNA–Protein interactions for RNA: ENSMUST00000117548.1

Hmgb1-ps2-201, mousemouse

BASIC

Gene Hmgb1-ps2, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-ps2-201ENSMUST00000117548 Tmem132aQ922P8 1018 aa8.93□□□□□ -0.98
Hmgb1-ps2-201ENSMUST00000117548 Stag3O70576 1240 aa8.91□□□□□ -0.98
Hmgb1-ps2-201ENSMUST00000117548 Chrm1P12657 460 aa8.89□□□□□ -0.99
Hmgb1-ps2-201ENSMUST00000117548 Cnksr2Q80YA9 1032 aa8.88□□□□□ -0.99
Hmgb1-ps2-201ENSMUST00000117548 Zbtb7bQ64321 544 aa8.85□□□□□ -0.99
Hmgb1-ps2-201ENSMUST00000117548 Cadps2Q8BYR5 1297 aa8.84□□□□□ -0.99
Hmgb1-ps2-201ENSMUST00000117548 Stk25Q9Z2W1 426 aa8.84□□□□□ -0.99
Hmgb1-ps2-201ENSMUST00000117548 Gm13697A2AK42 830 aa8.83□□□□□ -1
Hmgb1-ps2-201ENSMUST00000117548 VaspP70460 375 aaKnown RBP8.83□□□□□ -1
Hmgb1-ps2-201ENSMUST00000117548 Stk3Q9JI10 497 aa8.83□□□□□ -1
Hmgb1-ps2-201ENSMUST00000117548 ChgaP26339 463 aaKnown RBP8.82□□□□□ -1
Hmgb1-ps2-201ENSMUST00000117548 Pdap1Q3UHX2 181 aaKnown RBP8.8□□□□□ -1
Hmgb1-ps2-201ENSMUST00000117548 ArxO35085 564 aa8.79□□□□□ -1
Hmgb1-ps2-201ENSMUST00000117548 Nyap1Q6PFX7 833 aa8.77□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Atad2Q8CDM1 1040 aa8.77□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Arhgef1Q61210 920 aaKnown RBP8.75□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Ric3Q8BPM6 367 aa8.75□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Stk24Q99KH8 431 aa8.75□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Pitpnm1O35954 1243 aa8.74□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Cypt1Q8CH20 168 aa8.73□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Sgip1Q8VD37 806 aa8.73□□□□□ -1.01
Hmgb1-ps2-201ENSMUST00000117548 Slc7a3P70423 618 aa8.7□□□□□ -1.02
Hmgb1-ps2-201ENSMUST00000117548 PygbQ8CI94 843 aaKnown RBP8.7□□□□□ -1.02
Hmgb1-ps2-201ENSMUST00000117548 Ripply1Q2WG77 201 aa8.67□□□□□ -1.02
Hmgb1-ps2-201ENSMUST00000117548 Trim35Q8C006 501 aa8.67□□□□□ -1.02
Hmgb1-ps2-201ENSMUST00000117548 Kdm2aP59997 1161 aa8.65□□□□□ -1.02
Hmgb1-ps2-201ENSMUST00000117548 Zc3h15Q3TIV5 426 aaKnown RBP8.65□□□□□ -1.02
Hmgb1-ps2-201ENSMUST00000117548 Mier1Q5UAK0 511 aa8.65□□□□□ -1.02
Hmgb1-ps2-201ENSMUST00000117548 CrebzfQ91ZR3 358 aa8.61□□□□□ -1.03
Hmgb1-ps2-201ENSMUST00000117548 Ak7Q9D2H2 614 aa8.61□□□□□ -1.03
Hmgb1-ps2-201ENSMUST00000117548 Gpr37l1Q99JG2 481 aa8.6□□□□□ -1.03
Hmgb1-ps2-201ENSMUST00000117548 Npm1Q61937 292 aaKnown RBP8.59□□□□□ -1.03
Hmgb1-ps2-201ENSMUST00000117548 Ggt6Q6PDE7 497 aa8.58□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 Apba2P98084 750 aa8.57□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 Slc24a3Q99PD7 645 aa8.57□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 UbtfP25976 765 aaKnown RBP8.55□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 Scaf1Q5U4C3 1256 aaKnown RBP8.55□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 1700006A11RikB9EHI3 544 aa8.54□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 SnphQ80U23 495 aa8.54□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 Pcdhb17Q91VD8 799 aa8.54□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 Dhx30Q99PU8 1217 aaKnown RBP8.54□□□□□ -1.04
Hmgb1-ps2-201ENSMUST00000117548 Erich4Q3UNU4 136 aa8.47□□□□□ -1.05
Hmgb1-ps2-201ENSMUST00000117548 Os9Q8K2C7 672 aa8.45□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Kank3Q9Z1P7 791 aa8.44□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 TprnA2AI08 749 aaKnown RBP8.43□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Bcl2l13P59017 434 aa8.43□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Fam117aQ7TNF9 451 aa8.42□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 E2f4Q8R0K9 410 aa8.42□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Cacnb1Q8R3Z5 597 aa8.42□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Kcnn1Q9EQR3 537 aa8.42□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 E9Q0B3 247 aa8.4□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Speer2E9Q9U2 264 aa8.4□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Znf579Q80VM4 562 aa8.4□□□□□ -1.06
Hmgb1-ps2-201ENSMUST00000117548 Pip4p2Q9CZX7 257 aa8.39□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Prr29B1ARI9 187 aa8.38□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Ildr2B5TVM2 661 aa8.38□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Ndufv2Q9D6J6 248 aa8.38□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Ttbk1Q6PCN3 1308 aa8.37□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Znf703P0CL69 594 aa8.36□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 PrimpolQ6P1E7 537 aa8.36□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Ciz1Q8VEH2 845 aa8.36□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Irx6Q9ER75 438 aa8.35□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Pdzrn4E9PUZ9 1014 aa8.34□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Pde8bE9Q4S1 865 aa8.34□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Ddx11Q6AXC6 880 aa8.34□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Slain2Q8CI08 581 aa8.34□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Bclaf1Q8K019 919 aaKnown RBP8.34□□□□□ -1.07
Hmgb1-ps2-201ENSMUST00000117548 Clcn6O35454 870 aa8.33□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Dok7Q18PE0 504 aa8.33□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Tulp1Q9Z273 543 aa8.33□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Rasgrp4Q8BTM9 673 aa8.32□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Tox2A2A472 547 aa8.31□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Brpf1B2RRD7 1212 aa8.3□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Rtl5Q5DTT4 599 aa8.3□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Nap1l5Q9JJF0 156 aa8.3□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 GopcQ8BH60 463 aa8.28□□□□□ -1.08
Hmgb1-ps2-201ENSMUST00000117548 Sptlc1O35704 473 aa8.27□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Irf6P97431 467 aa8.27□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Mllt3A2AM29 569 aa8.26□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Prim1P20664 417 aa8.26□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 OsbpQ3B7Z2 805 aa8.26□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Pdia6Q922R8 440 aaKnown RBP8.26□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 IncenpQ9WU62 880 aa8.26□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Rad21Q61550 635 aaKnown RBP8.25□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Ccdc96Q9CR92 584 aa8.25□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Bcl11bQ99PV8 884 aa8.22□□□□□ -1.09
Hmgb1-ps2-201ENSMUST00000117548 Pcdhb20Q91XZ9 799 aa8.21□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 Mink1Q9JM52 1308 aa8.21□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 Evi5P97366 809 aa8.19□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 Prom2Q3UUY6 835 aa8.19□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 Tor1aip2Q8BYU6 502 aa8.19□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 GapdhsQ64467 440 aa8.18□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 Znf516Q7TSH3 1157 aa8.17□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 ZyxQ62523 564 aa8.15□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 Tpcn2Q8BWC0 731 aa8.15□□□□□ -1.1
Hmgb1-ps2-201ENSMUST00000117548 Fkbp4P30416 458 aa8.14□□□□□ -1.11
Hmgb1-ps2-201ENSMUST00000117548 Actn4P57780 912 aaKnown RBP8.14□□□□□ -1.11
Hmgb1-ps2-201ENSMUST00000117548 Znf330Q922H9 316 aa8.14□□□□□ -1.11
Hmgb1-ps2-201ENSMUST00000117548 Prr7Q3V0I2 269 aa8.12□□□□□ -1.11
Hmgb1-ps2-201ENSMUST00000117548 Jph4Q80WT0 628 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms