RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Thoc2B1AZI6 1594 aaKnown RBP15.06■□□□□ 0
Rnf40-201ENSMUST00000033088 P3h3Q8CG70 732 aa15.04■□□□□ -0
Rnf40-201ENSMUST00000033088 Zbtb4Q5F293 982 aa15.03■□□□□ -0
Rnf40-201ENSMUST00000033088 ArxO35085 564 aa15.03■□□□□ -0
Rnf40-201ENSMUST00000033088 Calr4Q3TQS0 420 aa15.01□□□□□ -0.01
Rnf40-201ENSMUST00000033088 Phldb1Q6PDH0 1371 aaKnown RBP14.99□□□□□ -0.01
Rnf40-201ENSMUST00000033088 Unc13aQ4KUS2 1712 aa14.94□□□□□ -0.02
Rnf40-201ENSMUST00000033088 TnnQ80Z71 1560 aa14.94□□□□□ -0.02
Rnf40-201ENSMUST00000033088 Kif15Q6P9L6 1387 aa14.94□□□□□ -0.02
Rnf40-201ENSMUST00000033088 Top2aQ01320 1528 aaKnown RBP14.93□□□□□ -0.02
Rnf40-201ENSMUST00000033088 Lamc3Q9R0B6 1581 aa14.93□□□□□ -0.02
Rnf40-201ENSMUST00000033088 Slc4a3P16283 1227 aa14.88□□□□□ -0.03
Rnf40-201ENSMUST00000033088 Fam135aQ6NS59 1506 aa14.88□□□□□ -0.03
Rnf40-201ENSMUST00000033088 Ubl4bQ9CQ84 188 aa14.87□□□□□ -0.03
Rnf40-201ENSMUST00000033088 Zbtb7cQ8VCZ7 619 aa14.86□□□□□ -0.03
Rnf40-201ENSMUST00000033088 Wdr43Q6ZQL4 677 aaKnown RBP14.8□□□□□ -0.04
Rnf40-201ENSMUST00000033088 Ccdc18Q640L5 1455 aa14.8□□□□□ -0.04
Rnf40-201ENSMUST00000033088 Rtl5Q5DTT4 599 aa14.79□□□□□ -0.04
Rnf40-201ENSMUST00000033088 Rapgef2Q8CHG7 1496 aa14.78□□□□□ -0.04
Rnf40-201ENSMUST00000033088 NeflP08551 543 aa14.78□□□□□ -0.04
Rnf40-201ENSMUST00000033088 Cux2P70298 1426 aa14.76□□□□□ -0.05
Rnf40-201ENSMUST00000033088 Camsap1A2AHC3 1581 aa14.76□□□□□ -0.05
Rnf40-201ENSMUST00000033088 Mrs2Q5NCE8 434 aa14.75□□□□□ -0.05
Rnf40-201ENSMUST00000033088 Prdm10Q3UTQ7 1184 aa14.75□□□□□ -0.05
Rnf40-201ENSMUST00000033088 Baz1bQ9Z277 1479 aa14.74□□□□□ -0.05
Rnf40-201ENSMUST00000033088 Npm1Q61937 292 aaKnown RBP14.73□□□□□ -0.05
Rnf40-201ENSMUST00000033088 Nolc1E9Q5C9 702 aaKnown RBP14.71□□□□□ -0.06
Rnf40-201ENSMUST00000033088 Clip1Q922J3 1391 aa14.69□□□□□ -0.06
Rnf40-201ENSMUST00000033088 Cep162Q6ZQ06 1403 aa14.68□□□□□ -0.06
Rnf40-201ENSMUST00000033088 Rad21Q61550 635 aaKnown RBP14.67□□□□□ -0.06
Rnf40-201ENSMUST00000033088 Dnajc5bQ9CQ94 199 aa14.66□□□□□ -0.06
Rnf40-201ENSMUST00000033088 NrkQ9R0G8 1455 aa14.65□□□□□ -0.06
Rnf40-201ENSMUST00000033088 Grin2bQ01097 1482 aa14.64□□□□□ -0.07
Rnf40-201ENSMUST00000033088 Rangap1P46061 589 aaKnown RBP14.62□□□□□ -0.07
Rnf40-201ENSMUST00000033088 Shroom4Q1W617 1475 aa14.62□□□□□ -0.07
Rnf40-201ENSMUST00000033088 Supt16hQ920B9 1047 aa14.61□□□□□ -0.07
Rnf40-201ENSMUST00000033088 Chic2Q9D9G3 165 aa14.61□□□□□ -0.07
Rnf40-201ENSMUST00000033088 Ythdc1E9Q5K9 736 aaKnown RBP14.6□□□□□ -0.07
Rnf40-201ENSMUST00000033088 LrpprcQ6PB66 1392 aaKnown RBP14.59□□□□□ -0.07
Rnf40-201ENSMUST00000033088 PtprkP35822 1457 aa14.59□□□□□ -0.07
Rnf40-201ENSMUST00000033088 Mrc2Q64449 1479 aa14.59□□□□□ -0.07
Rnf40-201ENSMUST00000033088 Sin3aQ60520 1274 aaKnown RBP14.57□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Eif4g1Q6NZJ6 1600 aaKnown RBP14.55□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Anp32bQ9EST5 272 aaKnown RBP14.54□□□□□ -0.08
Rnf40-201ENSMUST00000033088 PogzQ8BZH4 1409 aaKnown RBP14.53□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Efcab5A0JP43 1406 aa14.53□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Spryd3E9Q9B3 442 aa14.53□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Arhgap35Q91YM2 1499 aa14.53□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Vsig10D3YX43 558 aa14.52□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Hsp90aa1P07901 733 aaKnown RBP14.52□□□□□ -0.08
Rnf40-201ENSMUST00000033088 Wwc2Q6NXJ0 1187 aa14.51□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Polr3glQ8R0C0 218 aa14.51□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Dhx29Q6PGC1 1365 aaKnown RBP14.49□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Duox2A2AQ99 1517 aa14.49□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Map3k1P53349 1493 aa14.49□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Dbr1Q923B1 550 aa14.48□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Arid4bA2CG63 1314 aaKnown RBP14.48□□□□□ -0.09
Rnf40-201ENSMUST00000033088 CanxP35564 591 aaKnown RBP14.47□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Taok2Q6ZQ29 1240 aa14.47□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Hspa5P20029 655 aaKnown RBP14.46□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Os9Q8K2C7 672 aa14.46□□□□□ -0.09
Rnf40-201ENSMUST00000033088 Hdac5Q9Z2V6 1113 aa14.46□□□□□ -0.1
Rnf40-201ENSMUST00000033088 Mroh2bQ7M6Y6 1581 aa14.45□□□□□ -0.1
Rnf40-201ENSMUST00000033088 Apbb1Q9QXJ1 710 aa14.45□□□□□ -0.1
Rnf40-201ENSMUST00000033088 B4galnt3Q6L8S8 986 aa14.44□□□□□ -0.1
Rnf40-201ENSMUST00000033088 Ccdc27Q3V036 639 aa14.44□□□□□ -0.1
Rnf40-201ENSMUST00000033088 Kif21aQ9QXL2 1672 aa14.43□□□□□ -0.1
Rnf40-201ENSMUST00000033088 Crocc2F6XLV1 1638 aa14.41□□□□□ -0.1
Rnf40-201ENSMUST00000033088 Lmod3E9QA62 571 aa14.39□□□□□ -0.11
Rnf40-201ENSMUST00000033088 ChgaP26339 463 aaKnown RBP14.39□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Irx3P81067 507 aa14.39□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Ofd1Q80Z25 1017 aa14.38□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Plcd4Q8K3R3 807 aa14.38□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Eea1Q8BL66 1411 aa14.38□□□□□ -0.11
Rnf40-201ENSMUST00000033088 AqrQ8CFQ3 1481 aaKnown RBP14.37□□□□□ -0.11
Rnf40-201ENSMUST00000033088 4930567H17RikQ3V0K5 233 aa14.37□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Pak3Q61036 559 aa14.36□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Samd9lQ69Z37 1561 aa14.35□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Carmil1Q6EDY6 1374 aa14.35□□□□□ -0.11
Rnf40-201ENSMUST00000033088 BlmO88700 1416 aa14.34□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Upf2A2AT37 1269 aaKnown RBP14.34□□□□□ -0.11
Rnf40-201ENSMUST00000033088 Setd5Q5XJV7 1441 aa14.33□□□□□ -0.12
Rnf40-201ENSMUST00000033088 SynmQ70IV5 1561 aa14.33□□□□□ -0.12
Rnf40-201ENSMUST00000033088 Trim30dE9PWL0 497 aa14.31□□□□□ -0.12
Rnf40-201ENSMUST00000033088 Gtf3c3Q3TMP1 882 aa14.3□□□□□ -0.12
Rnf40-201ENSMUST00000033088 Trim26Q99PN3 545 aa14.29□□□□□ -0.12
Rnf40-201ENSMUST00000033088 Plb1Q3TTY0 1478 aa14.29□□□□□ -0.12
Rnf40-201ENSMUST00000033088 Ecm2Q5FW85 670 aa14.28□□□□□ -0.12
Rnf40-201ENSMUST00000033088 Rad54l2Q99NG0 1466 aa14.28□□□□□ -0.12
Rnf40-201ENSMUST00000033088 Rgl3Q3UYI5 709 aa14.26□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Armcx1Q9CX83 456 aa14.26□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Urb2E9Q7L1 1524 aaKnown RBP14.25□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Arap1Q4LDD4 1452 aa14.24□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Fkbp15Q6P9Q6 1216 aaKnown RBP14.24□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Polr1aO35134 1717 aaKnown RBP14.24□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Erich6D3Z6S9 713 aa14.24□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Grwd1Q810D6 446 aaKnown RBP14.23□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Rtn4Q99P72 1162 aaKnown RBP14.23□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Exoc6Q8R313 802 aa14.23□□□□□ -0.13
Rnf40-201ENSMUST00000033088 Znf692Q3U381 531 aa14.22□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms