RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Kdm5bQ80Y84 1544 aa23.49■■□□□ 1.35
Trim8-201ENSMUST00000026008 AqrQ8CFQ3 1481 aaKnown RBP23.49■■□□□ 1.35
Trim8-201ENSMUST00000026008 Camsap1A2AHC3 1581 aa23.48■■□□□ 1.35
Trim8-201ENSMUST00000026008 Baz1bQ9Z277 1479 aa23.46■■□□□ 1.35
Trim8-201ENSMUST00000026008 NclP09405 707 aaKnown RBP23.46■■□□□ 1.35
Trim8-201ENSMUST00000026008 Naip1Q9QWK5 1403 aa23.46■■□□□ 1.35
Trim8-201ENSMUST00000026008 Tiam1Q60610 1591 aa23.45■■□□□ 1.34
Trim8-201ENSMUST00000026008 Map3k1P53349 1493 aa23.44■■□□□ 1.34
Trim8-201ENSMUST00000026008 Cux2P70298 1426 aa23.43■■□□□ 1.34
Trim8-201ENSMUST00000026008 Phldb1Q6PDH0 1371 aaKnown RBP23.41■■□□□ 1.34
Trim8-201ENSMUST00000026008 Grin2bQ01097 1482 aa23.4■■□□□ 1.34
Trim8-201ENSMUST00000026008 Mroh2bQ7M6Y6 1581 aa23.4■■□□□ 1.34
Trim8-201ENSMUST00000026008 Hnrnpul2Q00PI9 745 aaKnown RBP23.38■■□□□ 1.33
Trim8-201ENSMUST00000026008 Ankrd26Q811D2 1581 aa23.33■■□□□ 1.33
Trim8-201ENSMUST00000026008 Slx4Q6P1D7 1565 aa23.32■■□□□ 1.32
Trim8-201ENSMUST00000026008 SafbD3YXK2 937 aaKnown RBP23.31■■□□□ 1.32
Trim8-201ENSMUST00000026008 Pcf11G3X9Z4 1553 aa23.3■■□□□ 1.32
Trim8-201ENSMUST00000026008 Hspa5P20029 655 aaKnown RBP23.29■■□□□ 1.32
Trim8-201ENSMUST00000026008 Ube2uB1AUC4 352 aa23.27■■□□□ 1.32
Trim8-201ENSMUST00000026008 TchhA0A0B4J1F9 1599 aa23.24■■□□□ 1.31
Trim8-201ENSMUST00000026008 Erich3F6QRE9 1637 aa23.22■■□□□ 1.31
Trim8-201ENSMUST00000026008 Thoc2B1AZI6 1594 aaKnown RBP23.21■■□□□ 1.31
Trim8-201ENSMUST00000026008 Tnnt3Q9QZ47 272 aa23.21■■□□□ 1.31
Trim8-201ENSMUST00000026008 Cux1P53564 1515 aa23.19■■□□□ 1.3
Trim8-201ENSMUST00000026008 3425401B19RikD3Z1D3 1412 aa23.19■■□□□ 1.3
Trim8-201ENSMUST00000026008 CntlnA2AM05 1397 aa23.19■■□□□ 1.3
Trim8-201ENSMUST00000026008 Rpap1Q80TE0 1409 aa23.18■■□□□ 1.3
Trim8-201ENSMUST00000026008 Carmil1Q6EDY6 1374 aa23.17■■□□□ 1.3
Trim8-201ENSMUST00000026008 LrpprcQ6PB66 1392 aaKnown RBP23.17■■□□□ 1.3
Trim8-201ENSMUST00000026008 Dnajc5bQ9CQ94 199 aa23.16■■□□□ 1.3
Trim8-201ENSMUST00000026008 Aebp1Q640N1 1128 aa23.13■■□□□ 1.29
Trim8-201ENSMUST00000026008 Chic2Q9D9G3 165 aa23.12■■□□□ 1.29
Trim8-201ENSMUST00000026008 Fyco1Q8VDC1 1437 aa23.1■■□□□ 1.29
Trim8-201ENSMUST00000026008 Slc24a1Q91WD8 1130 aa23.08■■□□□ 1.29
Trim8-201ENSMUST00000026008 Efcab5A0JP43 1406 aa23.08■■□□□ 1.28
Trim8-201ENSMUST00000026008 Lmo7E9PYF4 1699 aaKnown RBP23.07■■□□□ 1.28
Trim8-201ENSMUST00000026008 Duox2A2AQ99 1517 aa23.07■■□□□ 1.28
Trim8-201ENSMUST00000026008 Ccer2J3QPU5 274 aa23.06■■□□□ 1.28
Trim8-201ENSMUST00000026008 Sin3aQ60520 1274 aaKnown RBP23.06■■□□□ 1.28
Trim8-201ENSMUST00000026008 Mia2Q91ZV0 1396 aa23.06■■□□□ 1.28
Trim8-201ENSMUST00000026008 Dhx29Q6PGC1 1365 aaKnown RBP23.05■■□□□ 1.28
Trim8-201ENSMUST00000026008 Fhad1A6PWD2 1420 aa23.04■■□□□ 1.28
Trim8-201ENSMUST00000026008 Stra8P70278 393 aa23.04■■□□□ 1.28
Trim8-201ENSMUST00000026008 Gm13697A2AK42 830 aa23.03■■□□□ 1.28
Trim8-201ENSMUST00000026008 Znf710Q3U288 666 aa23.03■■□□□ 1.28
Trim8-201ENSMUST00000026008 PogzQ8BZH4 1409 aaKnown RBP23.03■■□□□ 1.28
Trim8-201ENSMUST00000026008 Fam71e1A1L3C1 212 aa23.01■■□□□ 1.27
Trim8-201ENSMUST00000026008 UacaQ8CGB3 1411 aa23■■□□□ 1.27
Trim8-201ENSMUST00000026008 Rad54l2Q99NG0 1466 aa23■■□□□ 1.27
Trim8-201ENSMUST00000026008 Urb2E9Q7L1 1524 aaKnown RBP22.99■■□□□ 1.27
Trim8-201ENSMUST00000026008 Ankrd36D3Z4K0 1415 aa22.97■■□□□ 1.27
Trim8-201ENSMUST00000026008 Vps8Q0P5W1 1427 aa22.96■■□□□ 1.27
Trim8-201ENSMUST00000026008 Fam135aQ6NS59 1506 aa22.96■■□□□ 1.27
Trim8-201ENSMUST00000026008 Gm7298A0A0N4SVU1 1476 aa22.95■■□□□ 1.27
Trim8-201ENSMUST00000026008 Naip2Q9QUK4 1447 aa22.94■■□□□ 1.26
Trim8-201ENSMUST00000026008 Gm1043A0A140LJC2 1431 aa22.93■■□□□ 1.26
Trim8-201ENSMUST00000026008 Ccnb3Q810T2 1396 aa22.89■■□□□ 1.25
Trim8-201ENSMUST00000026008 Myt1Q8CFC2 1127 aa22.88■■□□□ 1.25
Trim8-201ENSMUST00000026008 A2mQ6GQT1 1474 aa22.88■■□□□ 1.25
Trim8-201ENSMUST00000026008 Samd9lQ69Z37 1561 aa22.87■■□□□ 1.25
Trim8-201ENSMUST00000026008 SynmQ70IV5 1561 aa22.85■■□□□ 1.25
Trim8-201ENSMUST00000026008 Peg3Q3URU2 1571 aa22.83■■□□□ 1.25
Trim8-201ENSMUST00000026008 Calr4Q3TQS0 420 aa22.79■■□□□ 1.24
Trim8-201ENSMUST00000026008 Smg6P61406 1418 aaKnown RBP22.77■■□□□ 1.24
Trim8-201ENSMUST00000026008 Crocc2F6XLV1 1638 aa22.77■■□□□ 1.23
Trim8-201ENSMUST00000026008 Naip5Q9R016 1403 aa22.76■■□□□ 1.23
Trim8-201ENSMUST00000026008 Mphosph9A6H5Y1 991 aa22.75■■□□□ 1.23
Trim8-201ENSMUST00000026008 Eif5bQ05D44 1216 aaKnown RBP22.75■■□□□ 1.23
Trim8-201ENSMUST00000026008 Kif27Q7M6Z4 1394 aa22.74■■□□□ 1.23
Trim8-201ENSMUST00000026008 Polr1aO35134 1717 aaKnown RBP22.74■■□□□ 1.23
Trim8-201ENSMUST00000026008 Anp32aO35381 247 aa22.74■■□□□ 1.23
Trim8-201ENSMUST00000026008 Dennd4bQ3U1Y4 1499 aa22.73■■□□□ 1.23
Trim8-201ENSMUST00000026008 Kif21aQ9QXL2 1672 aa22.72■■□□□ 1.23
Trim8-201ENSMUST00000026008 Mrc2Q64449 1479 aa22.71■■□□□ 1.23
Trim8-201ENSMUST00000026008 Cabp1Q9JLK7 227 aa22.7■■□□□ 1.22
Trim8-201ENSMUST00000026008 EprsQ8CGC7 1512 aaKnown RBP22.69■■□□□ 1.22
Trim8-201ENSMUST00000026008 Zfp644E9QA22 1323 aa22.68■■□□□ 1.22
Trim8-201ENSMUST00000026008 Plb1Q3TTY0 1478 aa22.67■■□□□ 1.22
Trim8-201ENSMUST00000026008 Ncoa2Q61026 1462 aa22.66■■□□□ 1.22
Trim8-201ENSMUST00000026008 CadpsQ80TJ1 1355 aa22.66■■□□□ 1.22
Trim8-201ENSMUST00000026008 Gpatch8A2A6A1 1505 aa22.66■■□□□ 1.22
Trim8-201ENSMUST00000026008 Mrs2Q5NCE8 434 aa22.65■■□□□ 1.22
Trim8-201ENSMUST00000026008 Nolc1E9Q5C9 702 aaKnown RBP22.64■■□□□ 1.22
Trim8-201ENSMUST00000026008 Pkd2O35245 966 aa22.61■■□□□ 1.21
Trim8-201ENSMUST00000026008 Camsap2Q8C1B1 1461 aa22.61■■□□□ 1.21
Trim8-201ENSMUST00000026008 Wwc2Q6NXJ0 1187 aa22.6■■□□□ 1.21
Trim8-201ENSMUST00000026008 NexmifQ5DTT1 1515 aa22.6■■□□□ 1.21
Trim8-201ENSMUST00000026008 Pla2r1Q62028 1487 aa22.59■■□□□ 1.21
Trim8-201ENSMUST00000026008 Lmtk2Q3TYD6 1471 aa22.59■■□□□ 1.21
Trim8-201ENSMUST00000026008 Usp47Q8BY87 1376 aa22.57■■□□□ 1.2
Trim8-201ENSMUST00000026008 P3h3Q8CG70 732 aa22.57■■□□□ 1.2
Trim8-201ENSMUST00000026008 BC005561E9Q5E2 1589 aa22.56■■□□□ 1.2
Trim8-201ENSMUST00000026008 Arhgap27A2AB59 869 aa22.55■■□□□ 1.2
Trim8-201ENSMUST00000026008 Cul7Q8VE73 1689 aa22.53■■□□□ 1.2
Trim8-201ENSMUST00000026008 NrdcQ8BHG1 1161 aa22.53■■□□□ 1.2
Trim8-201ENSMUST00000026008 Grin2aP35436 1464 aa22.52■■□□□ 1.2
Trim8-201ENSMUST00000026008 Magi3Q9EQJ9 1476 aa22.52■■□□□ 1.2
Trim8-201ENSMUST00000026008 Ppp4r2Q0VGB7 417 aa22.5■■□□□ 1.19
Trim8-201ENSMUST00000026008 Exoc6Q8R313 802 aa22.5■■□□□ 1.19
Trim8-201ENSMUST00000026008 DiexfQ8BTT6 772 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms