RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Kdm5bQ80Y84 1544 aa23.49■■□□□ 1.35
Trim8-201ENSMUST00000026008 AqrQ8CFQ3 1481 aaKnown RBP23.49■■□□□ 1.35
Trim8-201ENSMUST00000026008 Camsap1A2AHC3 1581 aa23.48■■□□□ 1.35
Trim8-201ENSMUST00000026008 Baz1bQ9Z277 1479 aa23.46■■□□□ 1.35
Trim8-201ENSMUST00000026008 NclP09405 707 aaKnown RBP23.46■■□□□ 1.35
Trim8-201ENSMUST00000026008 Naip1Q9QWK5 1403 aa23.46■■□□□ 1.35
Trim8-201ENSMUST00000026008 Tiam1Q60610 1591 aa23.45■■□□□ 1.34
Trim8-201ENSMUST00000026008 Map3k1P53349 1493 aa23.44■■□□□ 1.34
Trim8-201ENSMUST00000026008 Cux2P70298 1426 aa23.43■■□□□ 1.34
Trim8-201ENSMUST00000026008 Phldb1Q6PDH0 1371 aaKnown RBP23.41■■□□□ 1.34
Trim8-201ENSMUST00000026008 Grin2bQ01097 1482 aa23.4■■□□□ 1.34
Trim8-201ENSMUST00000026008 Mroh2bQ7M6Y6 1581 aa23.4■■□□□ 1.34
Trim8-201ENSMUST00000026008 Hnrnpul2Q00PI9 745 aaKnown RBP23.38■■□□□ 1.33
Trim8-201ENSMUST00000026008 Ankrd26Q811D2 1581 aa23.33■■□□□ 1.33
Trim8-201ENSMUST00000026008 Slx4Q6P1D7 1565 aa23.32■■□□□ 1.32
Trim8-201ENSMUST00000026008 SafbD3YXK2 937 aaKnown RBP23.31■■□□□ 1.32
Trim8-201ENSMUST00000026008 Pcf11G3X9Z4 1553 aa23.3■■□□□ 1.32
Trim8-201ENSMUST00000026008 Hspa5P20029 655 aaKnown RBP23.29■■□□□ 1.32
Trim8-201ENSMUST00000026008 Ube2uB1AUC4 352 aa23.27■■□□□ 1.32
Trim8-201ENSMUST00000026008 TchhA0A0B4J1F9 1599 aa23.24■■□□□ 1.31
Trim8-201ENSMUST00000026008 Erich3F6QRE9 1637 aa23.22■■□□□ 1.31
Trim8-201ENSMUST00000026008 Thoc2B1AZI6 1594 aaKnown RBP23.21■■□□□ 1.31
Trim8-201ENSMUST00000026008 Tnnt3Q9QZ47 272 aa23.21■■□□□ 1.31
Trim8-201ENSMUST00000026008 Cux1P53564 1515 aa23.19■■□□□ 1.3
Trim8-201ENSMUST00000026008 3425401B19RikD3Z1D3 1412 aa23.19■■□□□ 1.3
Trim8-201ENSMUST00000026008 CntlnA2AM05 1397 aa23.19■■□□□ 1.3
Trim8-201ENSMUST00000026008 Rpap1Q80TE0 1409 aa23.18■■□□□ 1.3
Trim8-201ENSMUST00000026008 Carmil1Q6EDY6 1374 aa23.17■■□□□ 1.3
Trim8-201ENSMUST00000026008 LrpprcQ6PB66 1392 aaKnown RBP23.17■■□□□ 1.3
Trim8-201ENSMUST00000026008 Dnajc5bQ9CQ94 199 aa23.16■■□□□ 1.3
Trim8-201ENSMUST00000026008 Aebp1Q640N1 1128 aa23.13■■□□□ 1.29
Trim8-201ENSMUST00000026008 Chic2Q9D9G3 165 aa23.12■■□□□ 1.29
Trim8-201ENSMUST00000026008 Fyco1Q8VDC1 1437 aa23.1■■□□□ 1.29
Trim8-201ENSMUST00000026008 Slc24a1Q91WD8 1130 aa23.08■■□□□ 1.29
Trim8-201ENSMUST00000026008 Efcab5A0JP43 1406 aa23.08■■□□□ 1.28
Trim8-201ENSMUST00000026008 Lmo7E9PYF4 1699 aaKnown RBP23.07■■□□□ 1.28
Trim8-201ENSMUST00000026008 Duox2A2AQ99 1517 aa23.07■■□□□ 1.28
Trim8-201ENSMUST00000026008 Ccer2J3QPU5 274 aa23.06■■□□□ 1.28
Trim8-201ENSMUST00000026008 Sin3aQ60520 1274 aaKnown RBP23.06■■□□□ 1.28
Trim8-201ENSMUST00000026008 Mia2Q91ZV0 1396 aa23.06■■□□□ 1.28
Trim8-201ENSMUST00000026008 Dhx29Q6PGC1 1365 aaKnown RBP23.05■■□□□ 1.28
Trim8-201ENSMUST00000026008 Fhad1A6PWD2 1420 aa23.04■■□□□ 1.28
Trim8-201ENSMUST00000026008 Stra8P70278 393 aa23.04■■□□□ 1.28
Trim8-201ENSMUST00000026008 Gm13697A2AK42 830 aa23.03■■□□□ 1.28
Trim8-201ENSMUST00000026008 Znf710Q3U288 666 aa23.03■■□□□ 1.28
Trim8-201ENSMUST00000026008 PogzQ8BZH4 1409 aaKnown RBP23.03■■□□□ 1.28
Trim8-201ENSMUST00000026008 Fam71e1A1L3C1 212 aa23.01■■□□□ 1.27
Trim8-201ENSMUST00000026008 UacaQ8CGB3 1411 aa23■■□□□ 1.27
Trim8-201ENSMUST00000026008 Rad54l2Q99NG0 1466 aa23■■□□□ 1.27
Trim8-201ENSMUST00000026008 Urb2E9Q7L1 1524 aaKnown RBP22.99■■□□□ 1.27
Trim8-201ENSMUST00000026008 Ankrd36D3Z4K0 1415 aa22.97■■□□□ 1.27
Trim8-201ENSMUST00000026008 Vps8Q0P5W1 1427 aa22.96■■□□□ 1.27
Trim8-201ENSMUST00000026008 Fam135aQ6NS59 1506 aa22.96■■□□□ 1.27
Trim8-201ENSMUST00000026008 Gm7298A0A0N4SVU1 1476 aa22.95■■□□□ 1.27
Trim8-201ENSMUST00000026008 Naip2Q9QUK4 1447 aa22.94■■□□□ 1.26
Trim8-201ENSMUST00000026008 Gm1043A0A140LJC2 1431 aa22.93■■□□□ 1.26
Trim8-201ENSMUST00000026008 Ccnb3Q810T2 1396 aa22.89■■□□□ 1.25
Trim8-201ENSMUST00000026008 Myt1Q8CFC2 1127 aa22.88■■□□□ 1.25
Trim8-201ENSMUST00000026008 A2mQ6GQT1 1474 aa22.88■■□□□ 1.25
Trim8-201ENSMUST00000026008 Samd9lQ69Z37 1561 aa22.87■■□□□ 1.25
Trim8-201ENSMUST00000026008 SynmQ70IV5 1561 aa22.85■■□□□ 1.25
Trim8-201ENSMUST00000026008 Peg3Q3URU2 1571 aa22.83■■□□□ 1.25
Trim8-201ENSMUST00000026008 Calr4Q3TQS0 420 aa22.79■■□□□ 1.24
Trim8-201ENSMUST00000026008 Smg6P61406 1418 aaKnown RBP22.77■■□□□ 1.24
Trim8-201ENSMUST00000026008 Crocc2F6XLV1 1638 aa22.77■■□□□ 1.23
Trim8-201ENSMUST00000026008 Naip5Q9R016 1403 aa22.76■■□□□ 1.23
Trim8-201ENSMUST00000026008 Mphosph9A6H5Y1 991 aa22.75■■□□□ 1.23
Trim8-201ENSMUST00000026008 Eif5bQ05D44 1216 aaKnown RBP22.75■■□□□ 1.23
Trim8-201ENSMUST00000026008 Kif27Q7M6Z4 1394 aa22.74■■□□□ 1.23
Trim8-201ENSMUST00000026008 Polr1aO35134 1717 aaKnown RBP22.74■■□□□ 1.23
Trim8-201ENSMUST00000026008 Anp32aO35381 247 aa22.74■■□□□ 1.23
Trim8-201ENSMUST00000026008 Dennd4bQ3U1Y4 1499 aa22.73■■□□□ 1.23
Trim8-201ENSMUST00000026008 Kif21aQ9QXL2 1672 aa22.72■■□□□ 1.23
Trim8-201ENSMUST00000026008 Mrc2Q64449 1479 aa22.71■■□□□ 1.23
Trim8-201ENSMUST00000026008 Cabp1Q9JLK7 227 aa22.7■■□□□ 1.22
Trim8-201ENSMUST00000026008 EprsQ8CGC7 1512 aaKnown RBP22.69■■□□□ 1.22
Trim8-201ENSMUST00000026008 Zfp644E9QA22 1323 aa22.68■■□□□ 1.22
Trim8-201ENSMUST00000026008 Plb1Q3TTY0 1478 aa22.67■■□□□ 1.22
Trim8-201ENSMUST00000026008 Ncoa2Q61026 1462 aa22.66■■□□□ 1.22
Trim8-201ENSMUST00000026008 CadpsQ80TJ1 1355 aa22.66■■□□□ 1.22
Trim8-201ENSMUST00000026008 Gpatch8A2A6A1 1505 aa22.66■■□□□ 1.22
Trim8-201ENSMUST00000026008 Mrs2Q5NCE8 434 aa22.65■■□□□ 1.22
Trim8-201ENSMUST00000026008 Nolc1E9Q5C9 702 aaKnown RBP22.64■■□□□ 1.22
Trim8-201ENSMUST00000026008 Pkd2O35245 966 aa22.61■■□□□ 1.21
Trim8-201ENSMUST00000026008 Camsap2Q8C1B1 1461 aa22.61■■□□□ 1.21
Trim8-201ENSMUST00000026008 Wwc2Q6NXJ0 1187 aa22.6■■□□□ 1.21
Trim8-201ENSMUST00000026008 NexmifQ5DTT1 1515 aa22.6■■□□□ 1.21
Trim8-201ENSMUST00000026008 Pla2r1Q62028 1487 aa22.59■■□□□ 1.21
Trim8-201ENSMUST00000026008 Lmtk2Q3TYD6 1471 aa22.59■■□□□ 1.21
Trim8-201ENSMUST00000026008 Usp47Q8BY87 1376 aa22.57■■□□□ 1.2
Trim8-201ENSMUST00000026008 P3h3Q8CG70 732 aa22.57■■□□□ 1.2
Trim8-201ENSMUST00000026008 BC005561E9Q5E2 1589 aa22.56■■□□□ 1.2
Trim8-201ENSMUST00000026008 Arhgap27A2AB59 869 aa22.55■■□□□ 1.2
Trim8-201ENSMUST00000026008 Cul7Q8VE73 1689 aa22.53■■□□□ 1.2
Trim8-201ENSMUST00000026008 NrdcQ8BHG1 1161 aa22.53■■□□□ 1.2
Trim8-201ENSMUST00000026008 Grin2aP35436 1464 aa22.52■■□□□ 1.2
Trim8-201ENSMUST00000026008 Magi3Q9EQJ9 1476 aa22.52■■□□□ 1.2
Trim8-201ENSMUST00000026008 Ppp4r2Q0VGB7 417 aa22.5■■□□□ 1.19
Trim8-201ENSMUST00000026008 Exoc6Q8R313 802 aa22.5■■□□□ 1.19
Trim8-201ENSMUST00000026008 DiexfQ8BTT6 772 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms