RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Pcf11G3X9Z4 1553 aa27.33■■□□□ 1.97
Shkbp1-201ENSMUST00000003857 Csrnp3P59055 597 aa27.33■■□□□ 1.96
Shkbp1-201ENSMUST00000003857 Slx4Q6P1D7 1565 aa27.28■■□□□ 1.96
Shkbp1-201ENSMUST00000003857 Lmo7E9PYF4 1699 aaKnown RBP27.28■■□□□ 1.96
Shkbp1-201ENSMUST00000003857 1700123L14RikQ3V2K7 440 aa27.25■■□□□ 1.95
Shkbp1-201ENSMUST00000003857 BlmO88700 1416 aa27.22■■□□□ 1.95
Shkbp1-201ENSMUST00000003857 Eid3Q3V124 375 aa27.2■■□□□ 1.94
Shkbp1-201ENSMUST00000003857 Cux1P53564 1515 aa27.13■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 Phldb1Q6PDH0 1371 aaKnown RBP27.13■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 Carmil1Q6EDY6 1374 aa27.12■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 Efcab5A0JP43 1406 aa27.12■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 Peg3Q3URU2 1571 aa27.11■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 Cux2P70298 1426 aa27.11■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 CntlnA2AM05 1397 aa27.09■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 Thoc2B1AZI6 1594 aaKnown RBP27.08■■□□□ 1.93
Shkbp1-201ENSMUST00000003857 Aplp2Q06335 707 aa27.04■■□□□ 1.92
Shkbp1-201ENSMUST00000003857 Urb2E9Q7L1 1524 aaKnown RBP27.03■■□□□ 1.92
Shkbp1-201ENSMUST00000003857 3425401B19RikD3Z1D3 1412 aa27■■□□□ 1.91
Shkbp1-201ENSMUST00000003857 PogzQ8BZH4 1409 aaKnown RBP27■■□□□ 1.91
Shkbp1-201ENSMUST00000003857 LrpprcQ6PB66 1392 aaKnown RBP26.99■■□□□ 1.91
Shkbp1-201ENSMUST00000003857 Duox2A2AQ99 1517 aa26.98■■□□□ 1.91
Shkbp1-201ENSMUST00000003857 Fyco1Q8VDC1 1437 aa26.96■■□□□ 1.91
Shkbp1-201ENSMUST00000003857 Npm1Q61937 292 aaKnown RBP26.94■■□□□ 1.9
Shkbp1-201ENSMUST00000003857 Fhad1A6PWD2 1420 aa26.93■■□□□ 1.9
Shkbp1-201ENSMUST00000003857 SynmQ70IV5 1561 aa26.93■■□□□ 1.9
Shkbp1-201ENSMUST00000003857 Fam50aQ9WV03 339 aaKnown RBP26.91■■□□□ 1.9
Shkbp1-201ENSMUST00000003857 UacaQ8CGB3 1411 aa26.9■■□□□ 1.9
Shkbp1-201ENSMUST00000003857 Lmod2Q3UHZ5 550 aa26.89■■□□□ 1.9
Shkbp1-201ENSMUST00000003857 Ankrd36D3Z4K0 1415 aa26.89■■□□□ 1.9
Shkbp1-201ENSMUST00000003857 Samd9lQ69Z37 1561 aa26.88■■□□□ 1.89
Shkbp1-201ENSMUST00000003857 Polr1aO35134 1717 aaKnown RBP26.88■■□□□ 1.89
Shkbp1-201ENSMUST00000003857 Fam135aQ6NS59 1506 aa26.87■■□□□ 1.89
Shkbp1-201ENSMUST00000003857 Mia2Q91ZV0 1396 aa26.87■■□□□ 1.89
Shkbp1-201ENSMUST00000003857 Ubl4bQ9CQ84 188 aa26.86■■□□□ 1.89
Shkbp1-201ENSMUST00000003857 Gm1043A0A140LJC2 1431 aa26.85■■□□□ 1.89
Shkbp1-201ENSMUST00000003857 Vps8Q0P5W1 1427 aa26.85■■□□□ 1.89
Shkbp1-201ENSMUST00000003857 Crocc2F6XLV1 1638 aa26.82■■□□□ 1.88
Shkbp1-201ENSMUST00000003857 Ccer2J3QPU5 274 aa26.8■■□□□ 1.88
Shkbp1-201ENSMUST00000003857 Rpap1Q80TE0 1409 aa26.8■■□□□ 1.88
Shkbp1-201ENSMUST00000003857 Gm7298A0A0N4SVU1 1476 aa26.79■■□□□ 1.88
Shkbp1-201ENSMUST00000003857 Naip2Q9QUK4 1447 aa26.79■■□□□ 1.88
Shkbp1-201ENSMUST00000003857 Dhx29Q6PGC1 1365 aaKnown RBP26.78■■□□□ 1.88
Shkbp1-201ENSMUST00000003857 Aebp1Q640N1 1128 aa26.77■■□□□ 1.88
Shkbp1-201ENSMUST00000003857 NclP09405 707 aaKnown RBP26.71■■□□□ 1.87
Shkbp1-201ENSMUST00000003857 CenpbP27790 599 aa26.7■■□□□ 1.86
Shkbp1-201ENSMUST00000003857 A2mQ6GQT1 1474 aa26.68■■□□□ 1.86
Shkbp1-201ENSMUST00000003857 Rad54l2Q99NG0 1466 aa26.67■■□□□ 1.86
Shkbp1-201ENSMUST00000003857 Hspa5P20029 655 aaKnown RBP26.66■■□□□ 1.86
Shkbp1-201ENSMUST00000003857 Camsap2Q8C1B1 1461 aa26.66■■□□□ 1.86
Shkbp1-201ENSMUST00000003857 Tnnt3Q9QZ47 272 aa26.64■■□□□ 1.86
Shkbp1-201ENSMUST00000003857 Cul7Q8VE73 1689 aa26.64■■□□□ 1.86
Shkbp1-201ENSMUST00000003857 Gm13697A2AK42 830 aa26.63■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Lmtk2Q3TYD6 1471 aa26.62■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Kif21aQ9QXL2 1672 aa26.62■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Dennd4bQ3U1Y4 1499 aa26.6■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Abca5Q8K448 1642 aa26.59■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Mapk8ip2Q9ERE9 830 aa26.59■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 EprsQ8CGC7 1512 aaKnown RBP26.59■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Fhod3Q76LL6 1578 aa26.58■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Hnrnpul2Q00PI9 745 aaKnown RBP26.58■■□□□ 1.85
Shkbp1-201ENSMUST00000003857 Gm38655A0A286YDK6 273 aa26.57■■□□□ 1.84
Shkbp1-201ENSMUST00000003857 Pla2r1Q62028 1487 aa26.56■■□□□ 1.84
Shkbp1-201ENSMUST00000003857 Ccnb3Q810T2 1396 aa26.54■■□□□ 1.84
Shkbp1-201ENSMUST00000003857 Gcc2Q8CHG3 1679 aa26.54■■□□□ 1.84
Shkbp1-201ENSMUST00000003857 Gpatch8A2A6A1 1505 aa26.52■■□□□ 1.84
Shkbp1-201ENSMUST00000003857 Naip5Q9R016 1403 aa26.52■■□□□ 1.84
Shkbp1-201ENSMUST00000003857 CadpsQ80TJ1 1355 aa26.48■■□□□ 1.83
Shkbp1-201ENSMUST00000003857 Magi3Q9EQJ9 1476 aa26.46■■□□□ 1.83
Shkbp1-201ENSMUST00000003857 Stra8P70278 393 aa26.46■■□□□ 1.83
Shkbp1-201ENSMUST00000003857 Znf710Q3U288 666 aa26.46■■□□□ 1.83
Shkbp1-201ENSMUST00000003857 Ncoa2Q61026 1462 aa26.45■■□□□ 1.82
Shkbp1-201ENSMUST00000003857 NexmifQ5DTT1 1515 aa26.41■■□□□ 1.82
Shkbp1-201ENSMUST00000003857 Kif27Q7M6Z4 1394 aa26.4■■□□□ 1.82
Shkbp1-201ENSMUST00000003857 BC005561E9Q5E2 1589 aa26.39■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 Setbp1Q9Z180 1582 aa26.38■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 Adamts12Q811B3 1600 aa26.38■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 Chic2Q9D9G3 165 aa26.37■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 WizO88286 1684 aaKnown RBP26.37■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 Grin2aP35436 1464 aa26.36■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 Rfx7F8VPJ6 1459 aa26.34■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 SafbD3YXK2 937 aaKnown RBP26.34■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 Pprc1Q6NZN1 1644 aa26.33■■□□□ 1.81
Shkbp1-201ENSMUST00000003857 Ube2uB1AUC4 352 aa26.31■■□□□ 1.8
Shkbp1-201ENSMUST00000003857 Myt1Q8CFC2 1127 aa26.31■■□□□ 1.8
Shkbp1-201ENSMUST00000003857 Smg6P61406 1418 aaKnown RBP26.3■■□□□ 1.8
Shkbp1-201ENSMUST00000003857 Soga1E1U8D0 1418 aa26.29■■□□□ 1.8
Shkbp1-201ENSMUST00000003857 Mrc2Q64449 1479 aa26.28■■□□□ 1.8
Shkbp1-201ENSMUST00000003857 Sin3aQ60520 1274 aaKnown RBP26.27■■□□□ 1.8
Shkbp1-201ENSMUST00000003857 Mphosph9A6H5Y1 991 aa26.24■■□□□ 1.79
Shkbp1-201ENSMUST00000003857 Disp1Q3TDN0 1521 aa26.23■■□□□ 1.79
Shkbp1-201ENSMUST00000003857 Setd1bQ8CFT2 1985 aa26.22■■□□□ 1.79
Shkbp1-201ENSMUST00000003857 Mug1P28665 1476 aa26.22■■□□□ 1.79
Shkbp1-201ENSMUST00000003857 Plb1Q3TTY0 1478 aa26.2■■□□□ 1.79
Shkbp1-201ENSMUST00000003857 PxdnQ3UQ28 1475 aa26.19■■□□□ 1.78
Shkbp1-201ENSMUST00000003857 Ift140E9PY46 1464 aa26.19■■□□□ 1.78
Shkbp1-201ENSMUST00000003857 Abca16E9PWJ7 1678 aa26.19■■□□□ 1.78
Shkbp1-201ENSMUST00000003857 Abcc5Q9R1X5 1436 aa26.15■■□□□ 1.78
Shkbp1-201ENSMUST00000003857 Rprd2Q6NXI6 1469 aaKnown RBP26.14■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Cabp1Q9JLK7 227 aa26.13■■□□□ 1.77
Shkbp1-201ENSMUST00000003857 Rapgef6Q5NCJ1 1609 aa26.13■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms