RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 KIF21AQ7Z4S6 1674 aa2□□□□□ -2.09
LRRC39-204ENST00000620882 TRBV10-3A0A0K0K1G6 114 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 A6NIN4 97 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 SPANXN5Q5MJ07 72 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 C10orf128Q5T292 105 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 LAMA4Q16363 1823 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 GBF1Q92538 1859 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 ERCC6L2Q5T890 1561 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
LRRC39-204ENST00000620882 MED13LQ71F56 2210 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 CTTNBP2Q8WZ74 1663 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 SIP14410 1827 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 SDHAF1A6NFY7 115 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 UBE2D1P51668 147 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 Q8N6K4 173 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 CCL26Q9Y258 94 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 NEXMIFQ5QGS0 1516 aa1.99□□□□□ -2.09
LRRC39-204ENST00000620882 SHROOM3Q8TF72 1996 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 C7orf77A4D0Y5 90 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 CHKB-CPT1BH3BT56 60 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 CTSGP08311 255 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 KRTAP10-8P60410 259 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 KRTDAPP60985 99 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 UBE2D3P61077 147 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 UBE2D2P62837 147 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 IGKV3-7A0A075B6H7 116 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 TRBV7-3A0A075B6L6 115 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 HMGXB3Q12766 1538 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 SPAG17Q6Q759 2223 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 LINC00304Q8N9R0 145 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.98□□□□□ -2.09
LRRC39-204ENST00000620882 RABAC1Q9UI14 185 aa1.98□□□□□ -2.09
LRRC39-204ENST00000620882 KIAA1109Q2LD37 5005 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 TOP2BQ02880 1626 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 TRBV7-1A0A0A6YYK4 115 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 SPINT3P49223 89 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 PDE6HQ13956 83 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 Q9BRP9 147 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 TIMM21Q9BVV7 248 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 CLTCQ00610 1675 aaKnown RBP1.97□□□□□ -2.09
LRRC39-204ENST00000620882 TARBP1Q13395 1621 aaKnown RBP1.97□□□□□ -2.09
LRRC39-204ENST00000620882 MYO3AQ8NEV4 1616 aa1.97□□□□□ -2.09
LRRC39-204ENST00000620882 ATP10BO94823 1461 aa1.96□□□□□ -2.09
LRRC39-204ENST00000620882 PXDNQ92626 1479 aa1.96□□□□□ -2.09
LRRC39-204ENST00000620882 PRXQ9BXM0 1461 aa1.96□□□□□ -2.09
LRRC39-204ENST00000620882 ANKARQ7Z5J8 1434 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 TMEM30CPA0ZSE6 113 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 FAM223BA6NKX1 122 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 ZNF56Q15929 161 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 VMO1Q7Z5L0 202 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 CYP4F30PQ9H0H9 118 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 PSENENQ9NZ42 101 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 ABCA1O95477 2261 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 ALPK2Q86TB3 2170 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 EEA1Q15075 1411 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 C1orf137Q5JT78 98 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 HIGD2AQ9BW72 106 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 C22orf24Q9Y442 160 aa1.96□□□□□ -2.1
LRRC39-204ENST00000620882 ARHGEF5Q12774 1597 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 PEAK1Q9H792 1746 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 CCDC180Q9P1Z9 1646 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 MAP3K4Q9Y6R4 1608 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 TRBV6-8A0A0A6YYG3 113 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 F2Z2F3 143 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 F8WEM9 126 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 EDDM3BP56851 147 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 KLKP1Q107X0 134 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 ELOBQ15370 118 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 C20orf197Q8N268 126 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 MRPL36Q9P0J6 103 aaKnown RBP1.95□□□□□ -2.1
LRRC39-204ENST00000620882 PRO1854Q9UHT4 67 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 SLIT2O94813 1529 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 SIPA1L3O60292 1781 aaPredicted RBP1.95□□□□□ -2.1
LRRC39-204ENST00000620882 NCOA2Q15596 1464 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 SCN7AQ01118 1682 aa1.95□□□□□ -2.1
LRRC39-204ENST00000620882 CACNA1GO43497 2377 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 CFAP74Q9C0B2 1584 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 IQCF6A8MYZ5 107 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 FAM167A-AS1Q96KT0 104 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 LINC01600Q96MT4 127 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 NRXN2Q9P2S2 1712 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 AFDNP55196 1824 aaKnown RBP1.94□□□□□ -2.1
LRRC39-204ENST00000620882 ZNF236Q9UL36 1845 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 TNRC6BQ9UPQ9 1833 aaKnown RBP1.94□□□□□ -2.1
LRRC39-204ENST00000620882 IGLV3-1P01715 115 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 Q6ZTI0 123 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 FDCSPQ8NFU4 85 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 NDUFA4L2Q9NRX3 87 aa1.94□□□□□ -2.1
LRRC39-204ENST00000620882 BLMP54132 1417 aaPredicted RBP1.94□□□□□ -2.1
LRRC39-204ENST00000620882 RAPGEF6Q8TEU7 1601 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 RGPD8O14715 1765 aaPredicted RBP1.93□□□□□ -2.1
LRRC39-204ENST00000620882 RGPD5Q99666 1765 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 DIP2CQ9Y2E4 1556 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 NUPR2A6NF83 97 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 HMGN4O00479 90 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 LYPD1Q8N2G4 141 aa1.93□□□□□ -2.1
LRRC39-204ENST00000620882 PATE1Q8WXA2 126 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms