RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 CEMP1Q6PRD7 247 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-221ENST00000600387 NPC2P61916 151 aa13.64□□□□□ -0.23
ARHGEF1-221ENST00000600387 Q6ZSV7 163 aa13.64□□□□□ -0.23
ARHGEF1-221ENST00000600387 PSMB8P28062 276 aa13.63□□□□□ -0.23
ARHGEF1-221ENST00000600387 RNASE13Q5GAN3 156 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-221ENST00000600387 UBE2D4Q9Y2X8 147 aa13.63□□□□□ -0.23
ARHGEF1-221ENST00000600387 DUX3Q96PT4 197 aa13.62□□□□□ -0.23
ARHGEF1-221ENST00000600387 PIMREGQ9BSJ6 248 aa13.62□□□□□ -0.23
ARHGEF1-221ENST00000600387 IGHV3-73A0A0B4J1V6 119 aa13.62□□□□□ -0.23
ARHGEF1-221ENST00000600387 CHCHD7Q9BUK0 85 aa13.62□□□□□ -0.23
ARHGEF1-221ENST00000600387 TRBV7-7A0A0K0K1E9 115 aa13.61□□□□□ -0.23
ARHGEF1-221ENST00000600387 A8MZ25 164 aa13.61□□□□□ -0.23
ARHGEF1-221ENST00000600387 UCNP55089 124 aa13.61□□□□□ -0.23
ARHGEF1-221ENST00000600387 DOPEY2Q9Y3R5 2298 aa13.61□□□□□ -0.23
ARHGEF1-221ENST00000600387 IGHV4-61A0A0C4DH41 118 aa13.61□□□□□ -0.23
ARHGEF1-221ENST00000600387 NACAE9PAV3 2078 aa13.6□□□□□ -0.23
ARHGEF1-221ENST00000600387 PROK1P58294 105 aa13.6□□□□□ -0.23
ARHGEF1-221ENST00000600387 NDUFA1O15239 70 aa13.6□□□□□ -0.23
ARHGEF1-221ENST00000600387 ACYP1P07311 99 aa13.6□□□□□ -0.23
ARHGEF1-221ENST00000600387 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
ARHGEF1-221ENST00000600387 PIK3CD-AS1Q5SR53 167 aa13.6□□□□□ -0.23
ARHGEF1-221ENST00000600387 SPTAN1Q13813 2472 aaKnown RBP13.6□□□□□ -0.23
ARHGEF1-221ENST00000600387 TMEM89A2RUT3 159 aa13.58□□□□□ -0.24
ARHGEF1-221ENST00000600387 TIRAPP58753 221 aa13.58□□□□□ -0.24
ARHGEF1-221ENST00000600387 TMEM95Q3KNT9 176 aa13.58□□□□□ -0.24
ARHGEF1-221ENST00000600387 AKAP6Q13023 2319 aa13.58□□□□□ -0.24
ARHGEF1-221ENST00000600387 RBMY1A1P0DJD3 496 aaKnown RBP13.57□□□□□ -0.24
ARHGEF1-221ENST00000600387 RBMY1CP0DJD4 496 aa13.57□□□□□ -0.24
ARHGEF1-221ENST00000600387 RBMY1FQ15415 496 aaKnown RBP13.57□□□□□ -0.24
ARHGEF1-221ENST00000600387 TMEM101Q96IK0 257 aa13.57□□□□□ -0.24
ARHGEF1-221ENST00000600387 FAM110AQ9BQ89 295 aa13.57□□□□□ -0.24
ARHGEF1-221ENST00000600387 IGLV5-45A0A087WSX0 123 aa13.57□□□□□ -0.24
ARHGEF1-221ENST00000600387 MEIG1Q5JSS6 88 aa13.57□□□□□ -0.24
ARHGEF1-221ENST00000600387 CEP295Q9C0D2 2601 aa13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 IGKV2-29A2NJV5 120 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 HTN1P15515 57 aa13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 CITED2Q99967 270 aaPredicted RBP13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 IMUPQ9GZP8 106 aa13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 DNAJC30Q96LL9 226 aa13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 CDKN2A-AS1Q9UH64 79 aa13.56□□□□□ -0.24
ARHGEF1-221ENST00000600387 COPS9Q8WXC6 57 aa13.55□□□□□ -0.24
ARHGEF1-221ENST00000600387 LINC00467Q9BRT7 94 aa13.55□□□□□ -0.24
ARHGEF1-221ENST00000600387 HIVEP3Q5T1R4 2406 aa13.55□□□□□ -0.24
ARHGEF1-221ENST00000600387 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
ARHGEF1-221ENST00000600387 DAND5Q8N907 189 aa13.55□□□□□ -0.24
ARHGEF1-221ENST00000600387 C10orf105Q8TEF2 133 aa13.55□□□□□ -0.24
ARHGEF1-221ENST00000600387 KNCNA6PVL3 124 aa13.53□□□□□ -0.24
ARHGEF1-221ENST00000600387 COX7A2LO14548 114 aa13.53□□□□□ -0.24
ARHGEF1-221ENST00000600387 ZNF415Q09FC8 603 aa13.53□□□□□ -0.24
ARHGEF1-221ENST00000600387 LINC00308Q8TCZ7 52 aa13.53□□□□□ -0.24
ARHGEF1-221ENST00000600387 CHCHD5Q9BSY4 110 aa13.53□□□□□ -0.24
ARHGEF1-221ENST00000600387 Q6ZSN1 163 aa13.53□□□□□ -0.24
ARHGEF1-221ENST00000600387 SMIM20Q8N5G0 67 aa13.53□□□□□ -0.24
ARHGEF1-221ENST00000600387 MSMBP08118 114 aa13.52□□□□□ -0.24
ARHGEF1-221ENST00000600387 Q9UF83 564 aa13.52□□□□□ -0.24
ARHGEF1-221ENST00000600387 CELSR1Q9NYQ6 3014 aa13.52□□□□□ -0.24
ARHGEF1-221ENST00000600387 SORL1Q92673 2214 aa13.52□□□□□ -0.25
ARHGEF1-221ENST00000600387 C10orf99Q6UWK7 81 aa13.52□□□□□ -0.25
ARHGEF1-221ENST00000600387 PRORYQ9H606 182 aa13.51□□□□□ -0.25
ARHGEF1-221ENST00000600387 A8MTW9 85 aa13.51□□□□□ -0.25
ARHGEF1-221ENST00000600387 IGHV3-53P01767 116 aa13.51□□□□□ -0.25
ARHGEF1-221ENST00000600387 TMEM126AQ9H061 195 aa13.51□□□□□ -0.25
ARHGEF1-221ENST00000600387 IGLV5-39A0A0G2JS06 123 aa13.5□□□□□ -0.25
ARHGEF1-221ENST00000600387 C19orf84I3L1E1 186 aa13.5□□□□□ -0.25
ARHGEF1-221ENST00000600387 HERVK_113P63121 156 aa13.5□□□□□ -0.25
ARHGEF1-221ENST00000600387 Q9H8V8 135 aa13.5□□□□□ -0.25
ARHGEF1-221ENST00000600387 DGAT2L7PQ6IED9 249 aa13.5□□□□□ -0.25
ARHGEF1-221ENST00000600387 SHISA2Q6UWI4 295 aa13.5□□□□□ -0.25
ARHGEF1-221ENST00000600387 IGHV3-38A0A0C4DH36 116 aa13.48□□□□□ -0.25
ARHGEF1-221ENST00000600387 DUX5Q96PT3 197 aa13.48□□□□□ -0.25
ARHGEF1-221ENST00000600387 TRACP01848 142 aa13.48□□□□□ -0.25
ARHGEF1-221ENST00000600387 LINC00643Q86TS7 51 aa13.48□□□□□ -0.25
ARHGEF1-221ENST00000600387 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF1-221ENST00000600387 ATRXP46100 2492 aa13.48□□□□□ -0.25
ARHGEF1-221ENST00000600387 HOXD3P31249 432 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF1-221ENST00000600387 HERV-K104P63124 156 aa13.47□□□□□ -0.25
ARHGEF1-221ENST00000600387 COX6A2Q02221 97 aa13.47□□□□□ -0.25
ARHGEF1-221ENST00000600387 CCL19Q99731 98 aa13.47□□□□□ -0.25
ARHGEF1-221ENST00000600387 FAM236AA0A1B0GUQ0 79 aa13.47□□□□□ -0.25
ARHGEF1-221ENST00000600387 FAM236BA0A1B0GV22 79 aa13.47□□□□□ -0.25
ARHGEF1-221ENST00000600387 DEFB131AP59861 70 aa13.47□□□□□ -0.25
ARHGEF1-221ENST00000600387 FAM19A3Q7Z5A8 133 aa13.46□□□□□ -0.25
ARHGEF1-221ENST00000600387 IGHV3OR16-12A0A075B7B8 117 aa13.46□□□□□ -0.26
ARHGEF1-221ENST00000600387 IGHV4-30-2A0A087WSY4 118 aa13.46□□□□□ -0.26
ARHGEF1-221ENST00000600387 AVPP01185 164 aa13.46□□□□□ -0.26
ARHGEF1-221ENST00000600387 IGHV4-59P01825 116 aa13.46□□□□□ -0.26
ARHGEF1-221ENST00000600387 LINC01587Q99440 93 aa13.46□□□□□ -0.26
ARHGEF1-221ENST00000600387 PRM2P04554 102 aa13.45□□□□□ -0.26
ARHGEF1-221ENST00000600387 BEAN1Q3B7T3 259 aa13.45□□□□□ -0.26
ARHGEF1-221ENST00000600387 LINC00242Q5T6M2 205 aa13.45□□□□□ -0.26
ARHGEF1-221ENST00000600387 MUC6Q6W4X9 2439 aa13.45□□□□□ -0.26
ARHGEF1-221ENST00000600387 RBMY1BA6NDE4 496 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 RBMY1EA6NEQ0 496 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 RBMY1DP0C7P1 496 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 RS1O15537 224 aa13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 DAZ2Q13117 558 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 SDIM1Q6ZPB5 146 aa13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 DAZ4Q86SG3 579 aaKnown RBP13.44□□□□□ -0.26
ARHGEF1-221ENST00000600387 C11orf72Q8NBR9 251 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms