RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RNASE3P12724 160 aaKnown RBP9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 K7EQD1 137 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 HIST2H2BCQ6DN03 193 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 HIST2H2BDQ6DRA6 164 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 PIEZO2Q9H5I5 2752 aa9.85□□□□□ -0.83
PCDHGB3-201ENST00000576222 UBE2D3P61077 147 aa9.84□□□□□ -0.83
PCDHGB3-201ENST00000576222 UBE2D2P62837 147 aa9.84□□□□□ -0.83
PCDHGB3-201ENST00000576222 TRBV6-5A0A0K0K1A5 114 aa9.84□□□□□ -0.83
PCDHGB3-201ENST00000576222 NBL1P41271 181 aa9.84□□□□□ -0.83
PCDHGB3-201ENST00000576222 TMEM263Q8WUH6 116 aaKnown RBP9.84□□□□□ -0.83
PCDHGB3-201ENST00000576222 JMJD7-PLA2G4BH0Y9G9 81 aa9.84□□□□□ -0.83
PCDHGB3-201ENST00000576222 RNF223E7ERA6 249 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 PSMB8P28062 276 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 SLURP1P55000 103 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 hADV29S1A0JD25 119 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 Q6Q795 121 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 Q6ZQT7 251 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 IMUPQ9GZP8 106 aa9.83□□□□□ -0.84
PCDHGB3-201ENST00000576222 COX8CQ7Z4L0 72 aa9.82□□□□□ -0.84
PCDHGB3-201ENST00000576222 J3QKU1 62 aa9.82□□□□□ -0.84
PCDHGB3-201ENST00000576222 LST1O00453 97 aa9.82□□□□□ -0.84
PCDHGB3-201ENST00000576222 SDIM1Q6ZPB5 146 aa9.82□□□□□ -0.84
PCDHGB3-201ENST00000576222 OTOGLQ3ZCN5 2332 aa9.82□□□□□ -0.84
PCDHGB3-201ENST00000576222 UTRNP46939 3433 aa9.82□□□□□ -0.84
PCDHGB3-201ENST00000576222 C1orf43Q9BWL3 253 aa9.82□□□□□ -0.84
PCDHGB3-201ENST00000576222 TRAV25A0A0B4J276 109 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 ANGP03950 147 aaKnown RBP9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 TMEM258P61165 79 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 PCNTO95613 3336 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 IGIPA6NJ69 53 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 MRAPQ8TCY5 172 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 A0A096LPF7 62 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 VPREB3Q9UKI3 123 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 CRIP2P52943 208 aaPredicted RBP9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 LINC00467Q9BRT7 94 aa9.81□□□□□ -0.84
PCDHGB3-201ENST00000576222 IGLV2-18A0A075B6J9 118 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 H7C423 109 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 NDUFA7O95182 113 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 A8MZ25 164 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 FBXL19-AS1Q494R0 122 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 J3QLI3 93 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 Q8NA96 180 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
PCDHGB3-201ENST00000576222 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 Q8N6K4 173 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 ADORA2A-AS1P86434 159 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 MYO9AB2RTY4 2548 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 PIEZO1Q92508 2521 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 TNFRSF13BO14836 293 aaPredicted RBP9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 TSHBP01222 138 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 PSMG3-AS1Q96PY0 264 aa9.79□□□□□ -0.84
PCDHGB3-201ENST00000576222 TLN1Q9Y490 2541 aaKnown RBP9.78□□□□□ -0.84
PCDHGB3-201ENST00000576222 NDUFA1O15239 70 aa9.78□□□□□ -0.84
PCDHGB3-201ENST00000576222 CACNA1AO00555 2505 aa9.78□□□□□ -0.84
PCDHGB3-201ENST00000576222 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
PCDHGB3-201ENST00000576222 C5orf47Q569G3 176 aa9.78□□□□□ -0.84
PCDHGB3-201ENST00000576222 DPH3Q96FX2 82 aa9.78□□□□□ -0.84
PCDHGB3-201ENST00000576222 K7EQG2 157 aa9.77□□□□□ -0.84
PCDHGB3-201ENST00000576222 LMO4P61968 165 aa9.77□□□□□ -0.84
PCDHGB3-201ENST00000576222 TRAV23DV6A0A075B6W5 121 aa9.77□□□□□ -0.85
PCDHGB3-201ENST00000576222 A6NDX4 124 aa9.77□□□□□ -0.85
PCDHGB3-201ENST00000576222 F5H768 121 aa9.77□□□□□ -0.85
PCDHGB3-201ENST00000576222 IGLV4-69A0A075B6H9 119 aa9.77□□□□□ -0.85
PCDHGB3-201ENST00000576222 TIMM17BO60830 172 aa9.77□□□□□ -0.85
PCDHGB3-201ENST00000576222 IGHV4-30-2A0A087WSY4 118 aa9.77□□□□□ -0.85
PCDHGB3-201ENST00000576222 TRBV10-1A0A0K0K1A3 114 aa9.77□□□□□ -0.85
PCDHGB3-201ENST00000576222 TMEM256-PLSCR3K7ERE1 68 aa9.76□□□□□ -0.85
PCDHGB3-201ENST00000576222 TIRAPP58753 221 aa9.76□□□□□ -0.85
PCDHGB3-201ENST00000576222 TSPEAR-AS2P59090 65 aa9.76□□□□□ -0.85
PCDHGB3-201ENST00000576222 PIK3CD-AS1Q5SR53 167 aa9.76□□□□□ -0.85
PCDHGB3-201ENST00000576222 DAD1P61803 113 aa9.76□□□□□ -0.85
PCDHGB3-201ENST00000576222 FAM240AA0A1B0GVK7 77 aa9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 C20orf197Q8N268 126 aa9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 KLLNB2CW77 178 aa9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 F8WEM9 126 aa9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 CRYGDP07320 174 aa9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 PROK1P58294 105 aa9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 TMEM89A2RUT3 159 aa9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 F8W735 103 aaPredicted RBP9.75□□□□□ -0.85
PCDHGB3-201ENST00000576222 C10orf105Q8TEF2 133 aa9.74□□□□□ -0.85
PCDHGB3-201ENST00000576222 COX7CP15954 63 aa9.74□□□□□ -0.85
PCDHGB3-201ENST00000576222 C16orf74Q96GX8 76 aa9.74□□□□□ -0.85
PCDHGB3-201ENST00000576222 CUL9Q8IWT3 2517 aa9.74□□□□□ -0.85
PCDHGB3-201ENST00000576222 MRGPRG-AS1Q2M3A8 158 aa9.73□□□□□ -0.85
PCDHGB3-201ENST00000576222 IGLV10-54A0A075B6I4 117 aa9.73□□□□□ -0.85
PCDHGB3-201ENST00000576222 PRB1P04280 392 aa9.73□□□□□ -0.85
PCDHGB3-201ENST00000576222 GYPEP15421 78 aa9.73□□□□□ -0.85
PCDHGB3-201ENST00000576222 SVIPQ8NHG7 77 aa9.73□□□□□ -0.85
PCDHGB3-201ENST00000576222 POM121L12Q8N7R1 296 aa9.72□□□□□ -0.85
PCDHGB3-201ENST00000576222 MRPS36P82909 103 aaKnown RBP9.72□□□□□ -0.85
PCDHGB3-201ENST00000576222 SERP2Q8N6R1 65 aa9.72□□□□□ -0.85
PCDHGB3-201ENST00000576222 NKAPP1Q8N9T2 125 aa9.72□□□□□ -0.85
PCDHGB3-201ENST00000576222 C9orf85Q96MD7 179 aa9.72□□□□□ -0.85
PCDHGB3-201ENST00000576222 ADAMTS20P59510 1910 aa9.72□□□□□ -0.85
PCDHGB3-201ENST00000576222 CCL24O00175 119 aa9.71□□□□□ -0.85
PCDHGB3-201ENST00000576222 RPL18AQ02543 176 aaKnown RBP9.71□□□□□ -0.85
PCDHGB3-201ENST00000576222 PRO0461Q9UI25 63 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms