RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 TMEM238LA0A1B0GVL6 79 aa13.1□□□□□ -0.31
TNFAIP1-202ENST00000544907 A6NJY4 79 aa13.1□□□□□ -0.31
TNFAIP1-202ENST00000544907 HTN1P15515 57 aa13.1□□□□□ -0.31
TNFAIP1-202ENST00000544907 ZNRF2Q8NHG8 242 aa13.1□□□□□ -0.31
TNFAIP1-202ENST00000544907 CITED2Q99967 270 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP1-202ENST00000544907 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
TNFAIP1-202ENST00000544907 NHP2Q9NX24 153 aaKnown RBP13.1□□□□□ -0.31
TNFAIP1-202ENST00000544907 IGLV4-3A0A075B6K6 122 aa13.09□□□□□ -0.31
TNFAIP1-202ENST00000544907 C12orf74Q32Q52 190 aa13.09□□□□□ -0.31
TNFAIP1-202ENST00000544907 RAB37Q96AX2 223 aa13.09□□□□□ -0.31
TNFAIP1-202ENST00000544907 AMELXQ99217 191 aa13.09□□□□□ -0.31
TNFAIP1-202ENST00000544907 VCX2Q9H322 139 aa13.09□□□□□ -0.31
TNFAIP1-202ENST00000544907 SPANXA1Q9NS26 97 aa13.09□□□□□ -0.31
TNFAIP1-202ENST00000544907 SPCS1Q9Y6A9 102 aa13.08□□□□□ -0.31
TNFAIP1-202ENST00000544907 SCGB1D4Q6XE38 83 aa13.08□□□□□ -0.32
TNFAIP1-202ENST00000544907 TMEM223A0PJW6 202 aa13.07□□□□□ -0.32
TNFAIP1-202ENST00000544907 TMEM170BQ5T4T1 132 aa13.07□□□□□ -0.32
TNFAIP1-202ENST00000544907 LEPROTO15243 131 aa13.06□□□□□ -0.32
TNFAIP1-202ENST00000544907 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
TNFAIP1-202ENST00000544907 CBY1Q9Y3M2 126 aa13.06□□□□□ -0.32
TNFAIP1-202ENST00000544907 SETD2Q9BYW2 2564 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP1-202ENST00000544907 A0A0J9YY99 117 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 IGLL5B9A064 214 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 J3QQQ9 107 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 A0A1W2PRX2 142 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 IGLV1-51P01701 117 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 SLC25A29Q8N8R3 303 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 TMEM263Q8WUH6 116 aaKnown RBP13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 PLEKHB2Q96CS7 222 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 XCL2Q9UBD3 114 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 JMJD1CQ15652 2540 aa13.05□□□□□ -0.32
TNFAIP1-202ENST00000544907 NF1P21359 2839 aa13.04□□□□□ -0.32
TNFAIP1-202ENST00000544907 IGHV3-73A0A0B4J1V6 119 aa13.04□□□□□ -0.32
TNFAIP1-202ENST00000544907 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
TNFAIP1-202ENST00000544907 CIDEAO60543 219 aa13.04□□□□□ -0.32
TNFAIP1-202ENST00000544907 PROK1P58294 105 aa13.04□□□□□ -0.32
TNFAIP1-202ENST00000544907 CHCHD7Q9BUK0 85 aa13.04□□□□□ -0.32
TNFAIP1-202ENST00000544907 TIMM21Q9BVV7 248 aa13.04□□□□□ -0.32
TNFAIP1-202ENST00000544907 K7ERJ3 54 aa13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 ZNF22P17026 224 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 LGALS3P17931 250 aaKnown RBP13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 EMP1P54849 157 aa13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 OCIAD2Q56VL3 154 aa13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 Q6ZSN1 163 aa13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 PRIMA1Q86XR5 153 aa13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 SORL1Q92673 2214 aa13.03□□□□□ -0.32
TNFAIP1-202ENST00000544907 UBE2D1P51668 147 aa13.02□□□□□ -0.32
TNFAIP1-202ENST00000544907 COTL1Q14019 142 aa13.02□□□□□ -0.32
TNFAIP1-202ENST00000544907 RRN3P1Q2M238 152 aa13.02□□□□□ -0.32
TNFAIP1-202ENST00000544907 C11orf44Q8N8P7 122 aa13.02□□□□□ -0.32
TNFAIP1-202ENST00000544907 FAM104AQ969W3 186 aa13.02□□□□□ -0.32
TNFAIP1-202ENST00000544907 ZNF479Q96JC4 524 aa13.02□□□□□ -0.32
TNFAIP1-202ENST00000544907 DAZ2Q13117 558 aaKnown RBP13.02□□□□□ -0.33
TNFAIP1-202ENST00000544907 SRSF9Q13242 221 aaKnown RBP eCLIP13.02□□□□□ -0.33
TNFAIP1-202ENST00000544907 DEFB104AQ8WTQ1 72 aa13.02□□□□□ -0.33
TNFAIP1-202ENST00000544907 OPRPNQ99935 248 aaPredicted RBP13.02□□□□□ -0.33
TNFAIP1-202ENST00000544907 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.33
TNFAIP1-202ENST00000544907 UBE2D4Q9Y2X8 147 aa13.02□□□□□ -0.33
TNFAIP1-202ENST00000544907 K7ERU9 68 aa13.01□□□□□ -0.33
TNFAIP1-202ENST00000544907 PRM2P04554 102 aa13.01□□□□□ -0.33
TNFAIP1-202ENST00000544907 RBX1P62877 108 aa13.01□□□□□ -0.33
TNFAIP1-202ENST00000544907 TINCRA0A1B0GVN0 87 aa13□□□□□ -0.33
TNFAIP1-202ENST00000544907 ADARB2-AS1A8MUL3 147 aa13□□□□□ -0.33
TNFAIP1-202ENST00000544907 SAP30O75446 220 aa13□□□□□ -0.33
TNFAIP1-202ENST00000544907 AZU1P20160 251 aa13□□□□□ -0.33
TNFAIP1-202ENST00000544907 TSPEAR-AS2P59090 65 aa13□□□□□ -0.33
TNFAIP1-202ENST00000544907 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
TNFAIP1-202ENST00000544907 TRAV4A0A0B4J268 109 aa12.99□□□□□ -0.33
TNFAIP1-202ENST00000544907 A0A0J9YXV3 536 aa12.99□□□□□ -0.33
TNFAIP1-202ENST00000544907 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
TNFAIP1-202ENST00000544907 C2CD3Q4AC94 2353 aa12.98□□□□□ -0.33
TNFAIP1-202ENST00000544907 IGHV3-30P01768 117 aa12.98□□□□□ -0.33
TNFAIP1-202ENST00000544907 IGHV3-30-5P0DP03 117 aa12.98□□□□□ -0.33
TNFAIP1-202ENST00000544907 HIST2H2BDQ6DRA6 164 aa12.98□□□□□ -0.33
TNFAIP1-202ENST00000544907 C16orf74Q96GX8 76 aa12.98□□□□□ -0.33
TNFAIP1-202ENST00000544907 SMAGPQ0VAQ4 97 aa12.97□□□□□ -0.33
TNFAIP1-202ENST00000544907 DAZ4Q86SG3 579 aaKnown RBP12.97□□□□□ -0.33
TNFAIP1-202ENST00000544907 NDUFA11Q86Y39 141 aa12.97□□□□□ -0.33
TNFAIP1-202ENST00000544907 DAZ3Q9NR90 486 aaKnown RBP12.97□□□□□ -0.33
TNFAIP1-202ENST00000544907 CSDC2Q9Y534 153 aaKnown RBP12.97□□□□□ -0.33
TNFAIP1-202ENST00000544907 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
TNFAIP1-202ENST00000544907 GIG44P09565 113 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP1-202ENST00000544907 NACAE9PAV3 2078 aa12.96□□□□□ -0.33
TNFAIP1-202ENST00000544907 F8W1H4 67 aa12.96□□□□□ -0.34
TNFAIP1-202ENST00000544907 RPL36AP83881 106 aaKnown RBP12.96□□□□□ -0.34
TNFAIP1-202ENST00000544907 RPL36ALQ969Q0 106 aaKnown RBP12.96□□□□□ -0.34
TNFAIP1-202ENST00000544907 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
TNFAIP1-202ENST00000544907 K7EQD1 137 aa12.95□□□□□ -0.34
TNFAIP1-202ENST00000544907 TIRAPP58753 221 aa12.95□□□□□ -0.34
TNFAIP1-202ENST00000544907 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP1-202ENST00000544907 OVOL2Q9BRP0 275 aa12.95□□□□□ -0.34
TNFAIP1-202ENST00000544907 Q9UF83 564 aa12.95□□□□□ -0.34
TNFAIP1-202ENST00000544907 TMEM238C9JI98 176 aa12.94□□□□□ -0.34
TNFAIP1-202ENST00000544907 LYRM7Q5U5X0 104 aa12.94□□□□□ -0.34
TNFAIP1-202ENST00000544907 FAM19A3Q7Z5A8 133 aa12.94□□□□□ -0.34
TNFAIP1-202ENST00000544907 IGLV5-45A0A087WSX0 123 aa12.93□□□□□ -0.34
TNFAIP1-202ENST00000544907 KRTAP24-1Q3LI83 254 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms