RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TPPP3Q9BW30 176 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 AP5S1Q9NUS5 200 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 KIF25-AS1Q9Y6Z4 181 aa6.53□□□□□ -1.36
TNFRSF1A-214ENST00000543048 A0A1B0GUT8 65 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 RAB5AP20339 215 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 LAGE3Q14657 143 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 MRPL54Q6P161 138 aaKnown RBP6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 WDR73Q6P4I2 378 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 RASL11AQ6T310 242 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TM2D2Q9BX73 214 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 Q9HAA7 133 aa6.52□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TRAV8-3A0A0A6YYJ7 113 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 A0A1B0GW15 77 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 A0A1B0GXF2 115 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 S100A8P05109 93 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 HBBP68871 147 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 RIGQ13278 110 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 COX19Q49B96 90 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 ANKRD39Q53RE8 183 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 LYZL1Q6UWQ5 148 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 DAZ4Q86SG3 579 aaKnown RBP6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 NIT1Q86X76 327 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 NEXN-AS1Q8NBZ9 246 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 AP1S3Q96PC3 154 aa6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 DAZ3Q9NR90 486 aaKnown RBP6.51□□□□□ -1.37
TNFRSF1A-214ENST00000543048 HSPG2P98160 4391 aa6.5□□□□□ -1.37
TNFRSF1A-214ENST00000543048 LRCOL1A6NCL2 159 aa6.5□□□□□ -1.37
TNFRSF1A-214ENST00000543048 MT-ND6P03923 174 aa6.5□□□□□ -1.37
TNFRSF1A-214ENST00000543048 FUSP35637 526 aaKnown RBP eCLIP6.5□□□□□ -1.37
TNFRSF1A-214ENST00000543048 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 A0A087WX48 190 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TMEM262E9PQX1 116 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 HLA-DQA1P01909 254 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TRGC1P0CF51 173 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 NTF3P20783 257 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 RPS10P46783 165 aaKnown RBP6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TMEM97Q5BJF2 176 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 DNAJC30Q96LL9 226 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 CHCHD7Q9BUK0 85 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 GNB1LQ9BYB4 327 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 COX11Q9Y6N1 276 aa6.49□□□□□ -1.37
TNFRSF1A-214ENST00000543048 H7C1H1 209 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 M0QY20 66 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 MGPP08493 103 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 CAMPP49913 170 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TWIST1Q15672 202 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TMEM136Q6ZRR5 245 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 GATD1Q8NB37 220 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 RMI2Q96E14 147 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 KLK12Q9UKR0 248 aa6.48□□□□□ -1.37
TNFRSF1A-214ENST00000543048 GCSHP23434 173 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 PKIAP61925 76 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 SUMO4Q6EEV6 95 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 Q8N814 137 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 NTN5Q8WTR8 489 aaPredicted RBP6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 FRZBQ92765 325 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 KRTAP17-1Q9BYP8 105 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 DPH3P1Q9H4G8 78 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 TRAPPC1Q9Y5R8 145 aa6.47□□□□□ -1.37
TNFRSF1A-214ENST00000543048 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 C1orf196B1AJZ1 125 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 KRTAP10-1P60331 282 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 Q0VG73 95 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 NTM-AS1Q6ZSK4 140 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 SMIM15Q7Z3B0 74 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 CHCHD5Q9BSY4 110 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 NIT2Q9NQR4 276 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
TNFRSF1A-214ENST00000543048 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
TNFRSF1A-214ENST00000543048 APCSP02743 223 aa6.45□□□□□ -1.38
TNFRSF1A-214ENST00000543048 TRGC2P03986 189 aa6.45□□□□□ -1.38
TNFRSF1A-214ENST00000543048 FABP9Q0Z7S8 132 aa6.45□□□□□ -1.38
TNFRSF1A-214ENST00000543048 UBE2WQ96B02 151 aa6.45□□□□□ -1.38
TNFRSF1A-214ENST00000543048 KRTAP4-5Q9BYR2 181 aa6.45□□□□□ -1.38
TNFRSF1A-214ENST00000543048 TMEM191AQ9H0A3 160 aa6.45□□□□□ -1.38
TNFRSF1A-214ENST00000543048 TRBV25-1A0A075B6N4 114 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 IGHV1-24A0A0C4DH33 117 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 PHOX2AO14813 284 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 RAB5BP61020 215 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 IQCJQ1A5X6 159 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 Q8N1X5 172 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 BAALCQ8WXS3 180 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
TNFRSF1A-214ENST00000543048 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 XGP55808 180 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 GAGE6Q13070 117 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 WFDC2Q14508 124 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 MPV17L2Q567V2 206 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 FAM104BQ5XKR9 115 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 ENHOQ6UWT2 76 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 AMN1Q8IY45 258 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 Q8N976 141 aa6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 TMA7Q9Y2S6 64 aaKnown RBP6.43□□□□□ -1.38
TNFRSF1A-214ENST00000543048 ABCA13Q86UQ4 5058 aa6.42□□□□□ -1.38
TNFRSF1A-214ENST00000543048 VPS13BQ7Z7G8 4022 aa6.42□□□□□ -1.38
TNFRSF1A-214ENST00000543048 LECT2O14960 151 aa6.42□□□□□ -1.38
TNFRSF1A-214ENST00000543048 CRPP02741 224 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms