RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 HIST2H2BCQ6DN03 193 aa9.69□□□□□ -0.86
DNMT1-203ENST00000540357 HIST2H2BDQ6DRA6 164 aa9.69□□□□□ -0.86
DNMT1-203ENST00000540357 C3orf56Q8N813 242 aa9.69□□□□□ -0.86
DNMT1-203ENST00000540357 LINC00308Q8TCZ7 52 aa9.69□□□□□ -0.86
DNMT1-203ENST00000540357 RPL35AP18077 110 aaKnown RBP9.69□□□□□ -0.86
DNMT1-203ENST00000540357 WDR87Q6ZQQ6 2873 aa9.69□□□□□ -0.86
DNMT1-203ENST00000540357 NXPH4O95158 308 aa9.68□□□□□ -0.86
DNMT1-203ENST00000540357 CRYGDP07320 174 aa9.68□□□□□ -0.86
DNMT1-203ENST00000540357 C10orf105Q8TEF2 133 aa9.68□□□□□ -0.86
DNMT1-203ENST00000540357 CDKN2A-AS1Q9UH64 79 aa9.68□□□□□ -0.86
DNMT1-203ENST00000540357 MRPS36P82909 103 aaKnown RBP9.68□□□□□ -0.86
DNMT1-203ENST00000540357 CFHR3Q02985 330 aa9.68□□□□□ -0.86
DNMT1-203ENST00000540357 IGKV3D-7A0A0C4DH55 119 aa9.67□□□□□ -0.86
DNMT1-203ENST00000540357 RS1O15537 224 aa9.67□□□□□ -0.86
DNMT1-203ENST00000540357 CRIP2P52943 208 aaPredicted RBP9.67□□□□□ -0.86
DNMT1-203ENST00000540357 DSCAML1Q8TD84 2053 aa9.67□□□□□ -0.86
DNMT1-203ENST00000540357 C11orf44Q8N8P7 122 aa9.67□□□□□ -0.86
DNMT1-203ENST00000540357 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
DNMT1-203ENST00000540357 CRLF1O75462 422 aa9.67□□□□□ -0.86
DNMT1-203ENST00000540357 SMCPP49901 116 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-203ENST00000540357 NBL1P41271 181 aa9.66□□□□□ -0.86
DNMT1-203ENST00000540357 CACNA1BQ00975 2339 aa9.66□□□□□ -0.86
DNMT1-203ENST00000540357 TRBV10-1A0A0K0K1A3 114 aa9.66□□□□□ -0.86
DNMT1-203ENST00000540357 SLURP1P55000 103 aa9.66□□□□□ -0.86
DNMT1-203ENST00000540357 JMJD7-PLA2G4BH0Y9G9 81 aa9.65□□□□□ -0.86
DNMT1-203ENST00000540357 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
DNMT1-203ENST00000540357 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
DNMT1-203ENST00000540357 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.87
DNMT1-203ENST00000540357 CENPFP49454 3210 aa9.65□□□□□ -0.87
DNMT1-203ENST00000540357 LECT2O14960 151 aa9.64□□□□□ -0.87
DNMT1-203ENST00000540357 DEFB130BP0DP73 79 aa9.64□□□□□ -0.87
DNMT1-203ENST00000540357 DEFB130AP0DP74 79 aa9.64□□□□□ -0.87
DNMT1-203ENST00000540357 Q9HAA7 133 aa9.64□□□□□ -0.87
DNMT1-203ENST00000540357 MED13LQ71F56 2210 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 IGHV4-30-2A0A087WSY4 118 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 NDUFA7O95182 113 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 DSCR8Q96T75 97 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 ANKHD1Q8IWZ3 2542 aaKnown RBP9.63□□□□□ -0.87
DNMT1-203ENST00000540357 UBE2D4Q9Y2X8 147 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 PCSK5Q92824 1860 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 HAMPP81172 84 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 DEFB136Q30KP8 78 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 DCANP1Q8TF63 244 aa9.63□□□□□ -0.87
DNMT1-203ENST00000540357 CXCL5P42830 114 aa9.62□□□□□ -0.87
DNMT1-203ENST00000540357 C16orf74Q96GX8 76 aa9.62□□□□□ -0.87
DNMT1-203ENST00000540357 hADV29S1A0JD25 119 aa9.62□□□□□ -0.87
DNMT1-203ENST00000540357 SBSPONQ8IVN8 264 aa9.62□□□□□ -0.87
DNMT1-203ENST00000540357 C14orf132Q9NPU4 83 aa9.62□□□□□ -0.87
DNMT1-203ENST00000540357 C5orf38Q86SI9 138 aa9.61□□□□□ -0.87
DNMT1-203ENST00000540357 A8MZ25 164 aa9.61□□□□□ -0.87
DNMT1-203ENST00000540357 RNF223E7ERA6 249 aa9.61□□□□□ -0.87
DNMT1-203ENST00000540357 FAM222AQ5U5X8 452 aa9.61□□□□□ -0.87
DNMT1-203ENST00000540357 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
DNMT1-203ENST00000540357 IGLV1-40P01703 118 aa9.6□□□□□ -0.87
DNMT1-203ENST00000540357 BRI3O95415 125 aa9.6□□□□□ -0.87
DNMT1-203ENST00000540357 XCL1P47992 114 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 KIF25-AS1Q9Y6Z4 181 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 TRAV25A0A0B4J276 109 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 AMELXQ99217 191 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 COL6A6A6NMZ7 2263 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 HTN3P15516 51 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 PROK1P58294 105 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
DNMT1-203ENST00000540357 H3BQ85 93 aa9.58□□□□□ -0.88
DNMT1-203ENST00000540357 FAM110AQ9BQ89 295 aa9.58□□□□□ -0.88
DNMT1-203ENST00000540357 COX7CP15954 63 aa9.58□□□□□ -0.88
DNMT1-203ENST00000540357 SDIM1Q6ZPB5 146 aa9.58□□□□□ -0.88
DNMT1-203ENST00000540357 POM121L12Q8N7R1 296 aa9.58□□□□□ -0.88
DNMT1-203ENST00000540357 MAPK1IP1LQ8NDC0 245 aa9.57□□□□□ -0.88
DNMT1-203ENST00000540357 SPTAN1Q13813 2472 aaKnown RBP9.57□□□□□ -0.88
DNMT1-203ENST00000540357 MUC6Q6W4X9 2439 aa9.57□□□□□ -0.88
DNMT1-203ENST00000540357 PSMB8P28062 276 aa9.57□□□□□ -0.88
DNMT1-203ENST00000540357 C4orf3Q8WVX3 66 aa9.57□□□□□ -0.88
DNMT1-203ENST00000540357 ATP5EP2Q5VTU8 51 aa9.57□□□□□ -0.88
DNMT1-203ENST00000540357 CREBBPQ92793 2442 aa9.57□□□□□ -0.88
DNMT1-203ENST00000540357 C5orf47Q569G3 176 aa9.56□□□□□ -0.88
DNMT1-203ENST00000540357 NBASA2RRP1 2371 aa9.56□□□□□ -0.88
DNMT1-203ENST00000540357 ADAMTSL4-AS1Q5T5F5 129 aa9.56□□□□□ -0.88
DNMT1-203ENST00000540357 BDP1A6H8Y1 2624 aa9.56□□□□□ -0.88
DNMT1-203ENST00000540357 LRRC75A-AS1Q8N1F1 130 aa9.55□□□□□ -0.88
DNMT1-203ENST00000540357 IBA57-AS1B1ANH7 110 aa9.55□□□□□ -0.88
DNMT1-203ENST00000540357 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
DNMT1-203ENST00000540357 AGRNO00468 2067 aa9.55□□□□□ -0.88
DNMT1-203ENST00000540357 TMEM258P61165 79 aa9.55□□□□□ -0.88
DNMT1-203ENST00000540357 FAM19A4Q96LR4 140 aa9.55□□□□□ -0.88
DNMT1-203ENST00000540357 LINC00315P59091 139 aa9.54□□□□□ -0.88
DNMT1-203ENST00000540357 PTPRBP23467 1997 aa9.54□□□□□ -0.88
DNMT1-203ENST00000540357 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
DNMT1-203ENST00000540357 SERP2Q8N6R1 65 aa9.54□□□□□ -0.88
DNMT1-203ENST00000540357 CCL24O00175 119 aa9.53□□□□□ -0.88
DNMT1-203ENST00000540357 LINC00526Q96FQ7 95 aa9.53□□□□□ -0.88
DNMT1-203ENST00000540357 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
DNMT1-203ENST00000540357 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
DNMT1-203ENST00000540357 ZNF580Q9UK33 172 aa9.53□□□□□ -0.88
DNMT1-203ENST00000540357 ANGP03950 147 aaKnown RBP9.52□□□□□ -0.89
DNMT1-203ENST00000540357 RBM3P98179 157 aaKnown RBP9.51□□□□□ -0.89
DNMT1-203ENST00000540357 PRORYQ9H606 182 aa9.51□□□□□ -0.89
DNMT1-203ENST00000540357 PIEZO1Q92508 2521 aa9.51□□□□□ -0.89
DNMT1-203ENST00000540357 Q6ZSV7 163 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms