RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 DEFB109BQ30KR1 87 aa-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 ZNF818PQ6ZRF7 136 aa-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 BAGE3Q86Y29 109 aa-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 PSMG3Q9BT73 122 aaPredicted RBP-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 SIPA1L3O60292 1781 aaPredicted RBP-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 NF1P21359 2839 aa-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 ARFGEF1Q9Y6D6 1849 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 ZMYM4Q5VZL5 1548 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 ARHGEF10O15013 1369 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 CDK5RAP2Q96SN8 1893 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 FAM92AA1XBS5 289 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 Q6ZUT4 128 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 WDR87Q6ZQQ6 2873 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 DOPEY2Q9Y3R5 2298 aa-0.43□□□□□ -2.48
CCDC7-208ENST00000537047 KIAA0100Q14667 2235 aaKnown RBP-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 TMEM2Q9UHN6 1383 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 MYCBP2O75592 4640 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 ANKRD11Q6UB99 2663 aaPredicted RBP-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 MGAM2Q2M2H8 2515 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 M0R129 80 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 M0R2Z0 102 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 IL5P05113 134 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 LINC00694P0DN24 101 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 CBLN1P23435 193 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 CKS1BP61024 79 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 RRAS2P62070 204 aaPredicted RBP-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 Q5VSD8 79 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 SCIMPQ6UWF3 145 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 PKD1L1Q8TDX9 2849 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 LYSTQ99698 3801 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 LAMA1P25391 3075 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 CSMD3Q7Z407 3707 aa-0.44□□□□□ -2.48
CCDC7-208ENST00000537047 ADGRB1O14514 1584 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 LRRC37A3O60309 1634 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 TRAV22A0A0B4J277 110 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 PITX3O75364 302 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 SPRR2DP22532 72 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 PLECQ15149 4684 aaKnown RBP-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 KRTAP19-6Q3LI70 58 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 SPTSSAQ969W0 71 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 SMIM3Q9BZL3 60 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 SPCS1Q9Y6A9 102 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 MYO15AQ9UKN7 3530 aa-0.45□□□□□ -2.48
CCDC7-208ENST00000537047 NIPBLQ6KC79 2804 aaeCLIP-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 ZNF609O15014 1411 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 PRG4Q92954 1404 aaPredicted RBP-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 ATRQ13535 2644 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 PRRC2CQ9Y520 2896 aaKnown RBP-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 MYH9P35579 1960 aaKnown RBP-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 NDUFB6O95139 128 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 CCL8P80075 99 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 DR1Q01658 176 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 CFAP126Q5VTH2 177 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 SPTSSBQ8NFR3 76 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 NBPF19A0A087WUL8 3843 aa-0.46□□□□□ -2.48
CCDC7-208ENST00000537047 FLNBO75369 2602 aaKnown RBP-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 AKAP13Q12802 2813 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 K7ERU9 68 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 NPFFO15130 113 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 SNCGO76070 127 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 GUCA1AP43080 201 aaPredicted RBP-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 AKAP14Q86UN6 197 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 Q8IZM0 81 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 LZICQ8WZA0 190 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 NPVFQ9HCQ7 196 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 SCN3BQ9NY72 215 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 LINC00312Q9Y6C7 94 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 CUBNO60494 3623 aa-0.47□□□□□ -2.48
CCDC7-208ENST00000537047 ANKRD30AQ9BXX3 1397 aa-0.47□□□□□ -2.49
CCDC7-208ENST00000537047 IFT172Q9UG01 1749 aa-0.47□□□□□ -2.49
CCDC7-208ENST00000537047 DCHS2Q6V1P9 2916 aa-0.48□□□□□ -2.49
CCDC7-208ENST00000537047 FLGP20930 4061 aaPredicted RBP-0.48□□□□□ -2.49
CCDC7-208ENST00000537047 S100A3P33764 101 aa-0.48□□□□□ -2.49
CCDC7-208ENST00000537047 DYNC1H1Q14204 4646 aaKnown RBP-0.48□□□□□ -2.49
CCDC7-208ENST00000537047 HECTD4Q9Y4D8 3996 aa-0.48□□□□□ -2.49
CCDC7-208ENST00000537047 ITPR2Q14571 2701 aa-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 PPRC1Q5VV67 1664 aaKnown RBP-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 ACACBO00763 2458 aa-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 MAP1BP46821 2468 aaKnown RBP-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 SPRR1AP35321 89 aa-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 ALX1Q15699 326 aa-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 KCNRGQ8N5I3 272 aa-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 MYH6P13533 1939 aa-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 SACSQ9NZJ4 4579 aa-0.49□□□□□ -2.49
CCDC7-208ENST00000537047 DNAH5Q8TE73 4624 aa-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 TEX15Q9BXT5 2789 aa-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 ARPC5O15511 151 aa-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 CCL18P55774 89 aa-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 S100A7L2Q5SY68 101 aa-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 R4GMQ9 66 aa-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 TNRC18O15417 2968 aaPredicted RBP-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 APOBP04114 4563 aaKnown RBP-0.5□□□□□ -2.49
CCDC7-208ENST00000537047 FHAD1B1AJZ9 1412 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 SPTBN2O15020 2390 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 SIX6O95475 246 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 SPAG11BQ08648 103 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 ITPR3Q14573 2671 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 SMIM4Q8WVI0 70 aa-0.51□□□□□ -2.49
CCDC7-208ENST00000537047 PXDNQ92626 1479 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms