RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 SHPRHQ149N8 1683 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 HUWE1Q7Z6Z7 4374 aaKnown RBP0.11□□□□□ -2.39
SKP1-203ENST00000517625 TRBV10-1A0A0K0K1A3 114 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 FXYD1O00168 92 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 SLC25A5P05141 298 aaKnown RBP0.11□□□□□ -2.39
SKP1-203ENST00000517625 CCKP06307 115 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 HIST1H1BP16401 226 aaKnown RBP0.11□□□□□ -2.39
SKP1-203ENST00000517625 ADCYAP1P18509 176 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 S100GP29377 79 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 UNQ5815/PRO19632Q6UWF5 114 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 SMIM15Q7Z3B0 74 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 SPANXA1Q9NS26 97 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 METTL1Q9UBP6 276 aaKnown RBP0.11□□□□□ -2.39
SKP1-203ENST00000517625 ADCY10Q96PN6 1610 aa0.11□□□□□ -2.39
SKP1-203ENST00000517625 PLECQ15149 4684 aaKnown RBP0.11□□□□□ -2.39
SKP1-203ENST00000517625 APOBP04114 4563 aaKnown RBP0.1□□□□□ -2.39
SKP1-203ENST00000517625 SPTBP11277 2137 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 ANKRD31Q8N7Z5 1873 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 CDK13Q14004 1512 aaKnown RBP0.1□□□□□ -2.39
SKP1-203ENST00000517625 TSTD3H0UI37 97 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 IGKCP01834 107 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 APOC1P02654 83 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 IL7P13232 177 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 POLR2JP52435 117 aaKnown RBP0.1□□□□□ -2.39
SKP1-203ENST00000517625 PCBD1P61457 104 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 PLGLB1Q02325 96 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 HSD17B12Q53GQ0 312 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 VMO1Q7Z5L0 202 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 HSPB11Q9Y547 144 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 MYH3P11055 1940 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 ROBO1Q9Y6N7 1651 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 DISP2A7MBM2 1401 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 NUP210Q8TEM1 1887 aaPredicted RBP0.1□□□□□ -2.39
SKP1-203ENST00000517625 ADGRL2O95490 1459 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 WDR7Q9Y4E6 1490 aa0.1□□□□□ -2.39
SKP1-203ENST00000517625 TRAV12-2A0A075B6T6 113 aa0.09□□□□□ -2.4
SKP1-203ENST00000517625 DPM2O94777 84 aa0.09□□□□□ -2.4
SKP1-203ENST00000517625 OR2H2O95918 312 aa0.09□□□□□ -2.4
SKP1-203ENST00000517625 MAGOHBQ96A72 148 aaKnown RBP0.09□□□□□ -2.4
SKP1-203ENST00000517625 COA4Q9NYJ1 87 aa0.09□□□□□ -2.4
SKP1-203ENST00000517625 TAS2R8Q9NYW2 309 aa0.09□□□□□ -2.4
SKP1-203ENST00000517625 PKHD1L1Q86WI1 4243 aa0.09□□□□□ -2.4
SKP1-203ENST00000517625 PBRM1Q86U86 1689 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 CPDO75976 1380 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 PLCE1Q9P212 2302 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 A0A1B0GX51 115 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 J3KT08 172 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 TCRAP04437 139 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 MPC1LP0DKB6 136 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 NDUFA11Q86Y39 141 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 OR8I2Q8N0Y5 310 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 DSCR8Q96T75 97 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 GINS2Q9Y248 185 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 WDR97A6NE52 1622 aa0.08□□□□□ -2.4
SKP1-203ENST00000517625 TARBP1Q13395 1621 aaKnown RBP0.08□□□□□ -2.4
SKP1-203ENST00000517625 KNTC1P50748 2209 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 PKD1L3Q7Z443 1732 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 OVOS2A0A0G2JMS6 1433 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 CXorf51AA0A1B0GTR3 108 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 YPEL1O60688 119 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 SCTP09683 121 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 KRTAP20-2Q3LI61 65 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 TMEM91Q6ZNR0 172 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 SELENOSQ9BQE4 189 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 PROK2Q9HC23 129 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 BET1LQ9NYM9 111 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 GRIN2AQ12879 1464 aa0.07□□□□□ -2.4
SKP1-203ENST00000517625 DNMBPQ6XZF7 1577 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 TNXBP22105 4242 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 MAP2P11137 1827 aaKnown RBP0.06□□□□□ -2.4
SKP1-203ENST00000517625 UHRF1BP1LA0JNW5 1464 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 PXDNQ92626 1479 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 AKAP6Q13023 2319 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 TRAV36DV7A0A075B6V5 113 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 SMIM24O75264 130 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 CD3DP04234 171 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 PAEPP09466 180 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 AKR1D1P51857 326 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 IQCJQ1A5X6 159 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 SLC25A26Q70HW3 274 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 CALML5Q9NZT1 146 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 NDUFAF1Q9Y375 327 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 A0A0G2JMZ2 1700 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 LY75O60449 1722 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 ITSN1Q15811 1721 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 ASXL1Q8IXJ9 1541 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 RGPD8O14715 1765 aaPredicted RBP0.06□□□□□ -2.4
SKP1-203ENST00000517625 RGPD5Q99666 1765 aa0.06□□□□□ -2.4
SKP1-203ENST00000517625 URB1O60287 2271 aaKnown RBP0.06□□□□□ -2.4
SKP1-203ENST00000517625 ANK1P16157 1881 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 ZNF609O15014 1411 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 ARHGAP31Q2M1Z3 1444 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 GAPVD1Q14C86 1478 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 BORCS7-ASMTA0A0B4J1R7 106 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 NBEAP1P0C6P0 100 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 PYYP10082 97 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 TMEM141Q96I45 108 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 SLC35B3Q9H1N7 401 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 DNAH3Q8TD57 4116 aa0.05□□□□□ -2.4
SKP1-203ENST00000517625 TANC2Q9HCD6 1990 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms