RNA–Protein interactions for RNA: ENST00000517146.1

RNU4ATAC9P-201, Transcript of RNA, U4atac small nuclear 9, pseudogene, humanhuman

BASIC

Gene RNU4ATAC9P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC9P-201ENST00000517146 TRAV13-1A0A0B4J241 112 aa-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 ERICH2A1L162 156 aa-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 TMEM114B3SHH9 223 aa-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 H3BMG7 143 aa-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 YKT6O15498 198 aa-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 HSPE1P61604 102 aaKnown RBP-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 NDUFA4L2Q9NRX3 87 aa-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 SSR3Q9UNL2 185 aa-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 TCOF1Q13428 1488 aaKnown RBP-2.34□□□□□ -2.78
RNU4ATAC9P-201ENST00000517146 CSMD1Q96PZ7 3565 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 TLN2Q9Y4G6 2542 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 E2F6O75461 281 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CRYGSP22914 178 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CCL18P55774 89 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 C9orf116Q5BN46 136 aaPredicted RBP-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 AKR1C8PQ5T2L2 129 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 STOML2Q9UJZ1 356 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 PTPRMP28827 1452 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 SBF2Q86WG5 1849 aa-2.35□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 MYH8P13535 1937 aa-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 RPS17P08708 135 aaKnown RBP-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CRYBA4P53673 196 aa-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 MAGOHP61326 146 aaKnown RBP-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 GNG5P63218 68 aa-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 DEFB110Q30KQ9 67 aa-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 AKAP14Q86UN6 197 aa-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 RPRMQ9NS64 109 aa-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CTNNBIP1Q9NSA3 81 aaPredicted RBP-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 NOP16Q9Y3C1 178 aaKnown RBP-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 MED23Q9ULK4 1368 aa-2.36□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 BPTFQ12830 3046 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 WDR97A6NE52 1622 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 LRRC37A3O60309 1634 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 BORCS7-ASMTA0A0B4J1R7 106 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CLPSL1A2RUU4 121 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 A6NIN4 97 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CETN3O15182 167 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 PPP1R17O96001 155 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 IFNA17P01571 189 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 HIST1H1BP16401 226 aaKnown RBP-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 UBE2D1P51668 147 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 LIN52Q52LA3 116 aa-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 RPL7L1Q6DKI1 246 aaKnown RBP-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 METTL1Q9UBP6 276 aaKnown RBP-2.37□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 SHANK2Q9UPX8 1470 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 TECPR2O15040 1411 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 KRTAP19-5Q3LI72 72 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 ATP6V0E2Q8NHE4 81 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 NUP210Q8TEM1 1887 aaPredicted RBP-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 SLC35B3Q9H1N7 401 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 NDUFA12Q9UI09 145 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 PRNDQ9UKY0 176 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 S4R3F8 94 aa-2.38□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 ZNF236Q9UL36 1845 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 GABARAPH6UMI1 98 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 UQCRQO14949 82 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 TPM1P09493 284 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 SPA17Q15506 151 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 HRCT1Q6UXD1 115 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 STX19Q8N4C7 294 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 MRPL40Q9NQ50 206 aaKnown RBP-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 LYRM2Q9NU23 88 aaPredicted RBP-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 ADGBQ8N7X0 1667 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 TULP4Q9NRJ4 1543 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 ARHGEF12Q9NZN5 1544 aa-2.39□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 SMG1Q96Q15 3661 aaKnown RBP-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CCDC144AA2RUR9 1427 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 TLN1Q9Y490 2541 aaKnown RBP-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 TRAV30A0A087WSZ9 112 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 LINC00959A0A1B0GUT2 108 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 I3L3M4 83 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 APOC3P02656 99 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 HEPN1Q6WQI6 88 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 ZNF818PQ6ZRF7 136 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CRIPTQ9P021 101 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 UHRF1BP1LA0JNW5 1464 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 PATJQ8NI35 1801 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 MYH2Q9UKX2 1941 aa-2.4□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 TRRAPQ9Y4A5 3859 aa-2.41□□□□□ -2.79
RNU4ATAC9P-201ENST00000517146 CICQ96RK0 1608 aaPredicted RBP-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 TRDV1A0A1B0GX56 115 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 SMIM23A6NLE4 172 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 J3QLW9 94 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 TPM2P07951 284 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 HSD11B1P28845 292 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 RPS28P62857 69 aaKnown RBP-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 CCDC42Q96M95 316 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 C9orf16Q9BUW7 83 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 SH3BGRL3Q9H299 93 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 LAMTOR2Q9Y2Q5 125 aa-2.41□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 M0QZK8 103 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 UQCR11O14957 56 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 RPP14O95059 124 aaKnown RBP-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 RBP4P02753 201 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 CMPK1P30085 196 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 B2MP61769 119 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 DCUN1D2Q6PH85 259 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 BAGE2Q86Y30 109 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 C10orf82Q8WW14 230 aa-2.42□□□□□ -2.8
RNU4ATAC9P-201ENST00000517146 CDC42SE2Q9NRR3 84 aa-2.42□□□□□ -2.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms