RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SAMD5Q5TGI4 173 aa4.88□□□□□ -1.63
ECHDC1-210ENST00000454859 LINC00173Q6ZV60 143 aa4.88□□□□□ -1.63
ECHDC1-210ENST00000454859 TRGV4A0A0C4DH28 118 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 SPART-AS1P0CW21 52 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 LINC00694P0DN24 101 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 SEC11AP67812 179 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 OR11H2Q8NH07 326 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 BAALCQ8WXS3 180 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 PAM16Q9Y3D7 125 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 JMJD1CQ15652 2540 aa4.87□□□□□ -1.63
ECHDC1-210ENST00000454859 COX8AP10176 69 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 FHL2Q14192 279 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 CDPF1Q6NVV7 123 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 SLC25A34Q6PIV7 304 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 NFE4Q86UQ8 179 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 PRO0255Q9UI72 69 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 CHTOPQ9Y3Y2 248 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 CCL25O15444 150 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 P0DMU3 169 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 FAM231AP0DMU4 169 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 FAM231CP0DMU5 169 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 HERVK_113P61574 105 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 FAM19A3Q7Z5A8 133 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 Q8NAQ8 132 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 ZNF479Q96JC4 524 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 AMELXQ99217 191 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 CST9LQ9H4G1 147 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 DKK2Q9UBU2 259 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 ATRQ13535 2644 aa4.86□□□□□ -1.63
ECHDC1-210ENST00000454859 GAGE12BA1L429 117 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 C11orf86A6NJI1 115 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 GAGE7O76087 117 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 GAGE12FP0CL80 117 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 GAGE12GP0CL81 117 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 GAGE12IP0CL82 117 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 TIRAPP58753 221 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 SLC25A29Q8N8R3 303 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 VCX2Q9H322 139 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 HIGD1BQ9P298 99 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 HHLA3Q9XRX5 114 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 PRSS29PA6NIE9 313 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 PCP4L1A6NKN8 68 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 ATP5G1P05496 136 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 Q6ZSN1 163 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 ZNRF2Q8NHG8 242 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 CHCHD7Q9BUK0 85 aa4.85□□□□□ -1.63
ECHDC1-210ENST00000454859 TRBV25-1A0A075B6N4 114 aa4.84□□□□□ -1.63
ECHDC1-210ENST00000454859 TMEM243Q9BU79 118 aa4.84□□□□□ -1.63
ECHDC1-210ENST00000454859 MRPL35Q9NZE8 188 aaKnown RBP4.84□□□□□ -1.63
ECHDC1-210ENST00000454859 IGLV4-3A0A075B6K6 122 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 IGHV4-28A0A0C4DH34 117 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 M0R143 59 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 KRTAP10-11P60412 298 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 DAD1P61803 113 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 DEFB135Q30KP9 77 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 SBSPONQ8IVN8 264 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 SPATA3Q8NHX4 192 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 PRO1933Q9H354 126 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 UBE2D4Q9Y2X8 147 aa4.84□□□□□ -1.64
ECHDC1-210ENST00000454859 TINCRA0A1B0GVN0 87 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 E9PLD3 99 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 TAL2Q16559 108 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 FAM222AQ5U5X8 452 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 TMEM101Q96IK0 257 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 IGHV3-73A0A0B4J1V6 119 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 LINC00587B1AMM8 73 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 PRM2P04554 102 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 OXLD1Q5BKU9 147 aa4.83□□□□□ -1.64
ECHDC1-210ENST00000454859 DNHD1Q96M86 4753 aa4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 A0A1B0GUV1 79 aa4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 H0Y8G0 127 aa4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 MRPL23Q16540 153 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 KRTAP21-3Q3LHN1 58 aa4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 DGAT2L7PQ6IED9 249 aa4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 PLEKHB2Q96CS7 222 aa4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 SPATA25Q9BR10 227 aa4.82□□□□□ -1.64
ECHDC1-210ENST00000454859 IGLV4-69A0A075B6H9 119 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 IGLV5-45A0A087WSX0 123 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 TRBV6-8A0A0A6YYG3 113 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 hDV102S1A0JD36 115 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 UBE2L6O14933 153 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 PAX4O43316 350 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 RPL39P62891 51 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 ZC2HC1BQ5TFG8 222 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 NEGR1Q7Z3B1 354 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 ATOH7Q8N100 152 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 ATP6V0E2Q8NHE4 81 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 C14orf144Q96I85 54 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 CUBNO60494 3623 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 H3BRM9 83 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 FGF6P10767 208 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 NMUP48645 174 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 HERVK_113P63121 156 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 LINC01561Q8N1V8 128 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 OR5A1Q8NGJ0 315 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 TENM1Q9UKZ4 2725 aa4.81□□□□□ -1.64
ECHDC1-210ENST00000454859 GAGE12JA6NER3 117 aa4.8□□□□□ -1.64
ECHDC1-210ENST00000454859 DEFB130BP0DP73 79 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms