RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
CNOT3-204ENST00000447684 DAZ3Q9NR90 486 aaKnown RBP11.81□□□□□ -0.52
CNOT3-204ENST00000447684 IGHV3-16A0A0C4DH30 117 aa11.8□□□□□ -0.52
CNOT3-204ENST00000447684 NDUFA4O00483 81 aa11.8□□□□□ -0.52
CNOT3-204ENST00000447684 MRPS36P82909 103 aaKnown RBP11.8□□□□□ -0.52
CNOT3-204ENST00000447684 FAM19A5Q7Z5A7 132 aaPredicted RBP11.8□□□□□ -0.52
CNOT3-204ENST00000447684 C5orf56Q8N8D9 126 aa11.8□□□□□ -0.52
CNOT3-204ENST00000447684 SIRPDQ9H106 197 aa11.8□□□□□ -0.52
CNOT3-204ENST00000447684 UBTD1Q9HAC8 227 aa11.8□□□□□ -0.52
CNOT3-204ENST00000447684 GAGE2AQ6NT46 116 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 HRNRQ86YZ3 2850 aaPredicted RBP11.79□□□□□ -0.52
CNOT3-204ENST00000447684 COL12A1Q99715 3063 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 FAM223BA6NKX1 122 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 FAM223AQ8IWN6 122 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 LINC00526Q96FQ7 95 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 NACAE9PAV3 2078 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 J3KT08 172 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 PF4V1P10720 104 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 PROK1P58294 105 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 KLRB1Q12918 225 aa11.79□□□□□ -0.52
CNOT3-204ENST00000447684 TTC28Q96AY4 2481 aa11.78□□□□□ -0.52
CNOT3-204ENST00000447684 CITED2Q99967 270 aaPredicted RBP11.78□□□□□ -0.52
CNOT3-204ENST00000447684 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.78□□□□□ -0.527e-7■■■□□ 16
CNOT3-204ENST00000447684 SPINK13Q1W4C9 94 aa11.78□□□□□ -0.52
CNOT3-204ENST00000447684 C5orf47Q569G3 176 aa11.78□□□□□ -0.52
CNOT3-204ENST00000447684 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
CNOT3-204ENST00000447684 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.53
CNOT3-204ENST00000447684 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.53
CNOT3-204ENST00000447684 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
CNOT3-204ENST00000447684 hADV29S1A0JD25 119 aa11.77□□□□□ -0.53
CNOT3-204ENST00000447684 BAALC-AS2P0C853 105 aa11.77□□□□□ -0.53
CNOT3-204ENST00000447684 SMIM9A6NGZ8 99 aa11.76□□□□□ -0.53
CNOT3-204ENST00000447684 KNCNA6PVL3 124 aa11.76□□□□□ -0.53
CNOT3-204ENST00000447684 MAP1AP78559 2803 aaPredicted RBP11.76□□□□□ -0.53
CNOT3-204ENST00000447684 LY6DQ14210 128 aa11.76□□□□□ -0.53
CNOT3-204ENST00000447684 CIRBPQ14011 172 aaKnown RBP11.75□□□□□ -0.53
CNOT3-204ENST00000447684 TRAV13-1A0A0B4J241 112 aa11.75□□□□□ -0.53
CNOT3-204ENST00000447684 COX7A2LO14548 114 aa11.75□□□□□ -0.53
CNOT3-204ENST00000447684 COX7CP15954 63 aa11.75□□□□□ -0.53
CNOT3-204ENST00000447684 LY6EQ16553 131 aa11.75□□□□□ -0.53
CNOT3-204ENST00000447684 Q8N2B8 174 aa11.75□□□□□ -0.53
CNOT3-204ENST00000447684 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
CNOT3-204ENST00000447684 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
CNOT3-204ENST00000447684 Q9UF83 564 aa11.74□□□□□ -0.53
CNOT3-204ENST00000447684 IGHV1OR15-1A0A075B7D0 117 aa11.74□□□□□ -0.53
CNOT3-204ENST00000447684 TIRAPP58753 221 aa11.74□□□□□ -0.53
CNOT3-204ENST00000447684 C11orf71Q6IPW1 123 aa11.74□□□□□ -0.53
CNOT3-204ENST00000447684 IGHV3-38A0A0C4DH36 116 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 Q9HAA7 133 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 MOB4Q9Y3A3 225 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 C19orf54Q5BKX5 351 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 LINC00308Q8TCZ7 52 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 Q9H8V8 135 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 TINCRA0A1B0GVN0 87 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 HOXD3P31249 432 aaPredicted RBP11.73□□□□□ -0.53
CNOT3-204ENST00000447684 SDIM1Q6ZPB5 146 aa11.73□□□□□ -0.53
CNOT3-204ENST00000447684 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
CNOT3-204ENST00000447684 LRRC75A-AS1Q8N1F1 130 aa11.72□□□□□ -0.53
CNOT3-204ENST00000447684 PYGO1Q9Y3Y4 419 aa11.72□□□□□ -0.53
CNOT3-204ENST00000447684 BRD3OSQ6XYD6 125 aa11.72□□□□□ -0.53
CNOT3-204ENST00000447684 DOPEY2Q9Y3R5 2298 aa11.71□□□□□ -0.53
CNOT3-204ENST00000447684 CEP295Q9C0D2 2601 aa11.71□□□□□ -0.54
CNOT3-204ENST00000447684 ZFHX2Q9C0A1 2572 aaPredicted RBP11.7□□□□□ -0.54
CNOT3-204ENST00000447684 IGKV3D-7A0A0C4DH55 119 aa11.7□□□□□ -0.54
CNOT3-204ENST00000447684 CCL21O00585 134 aa11.7□□□□□ -0.54
CNOT3-204ENST00000447684 CYSTM1Q9H1C7 97 aa11.7□□□□□ -0.54
CNOT3-204ENST00000447684 PRM2P04554 102 aa11.7□□□□□ -0.54
CNOT3-204ENST00000447684 ATP5G1P05496 136 aa11.7□□□□□ -0.54
CNOT3-204ENST00000447684 IGHG2P01859 326 aa11.69□□□□□ -0.54
CNOT3-204ENST00000447684 DGAT2L7PQ6IED9 249 aa11.69□□□□□ -0.54
CNOT3-204ENST00000447684 PEMTQ9UBM1 199 aa11.69□□□□□ -0.54
CNOT3-204ENST00000447684 TRACP01848 142 aa11.69□□□□□ -0.54
CNOT3-204ENST00000447684 FAM218AQ96MZ4 157 aa11.69□□□□□ -0.54
CNOT3-204ENST00000447684 PTPRQQ9UMZ3 2332 aa11.69□□□□□ -0.54
CNOT3-204ENST00000447684 C5orf38Q86SI9 138 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 KIR2DL5BQ8NHK3 375 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 LINC00467Q9BRT7 94 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 NDUFA1O15239 70 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 CDSNQ15517 529 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 OR13C6PQ8NH95 151 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 C2CD3Q4AC94 2353 aa11.68□□□□□ -0.54
CNOT3-204ENST00000447684 A0A1B0GX51 115 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 ATOX1O00244 68 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 TIMM17BO60830 172 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.67□□□□□ -0.54
CNOT3-204ENST00000447684 C2orf48Q96LS8 159 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 DNAL4O96015 105 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 INAFM2P0DMQ5 153 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 CXCL5P42830 114 aa11.67□□□□□ -0.54
CNOT3-204ENST00000447684 SYNJ2BPP57105 145 aa11.66□□□□□ -0.54
CNOT3-204ENST00000447684 SNRPD3P62318 126 aaKnown RBP11.66□□□□□ -0.54
CNOT3-204ENST00000447684 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
CNOT3-204ENST00000447684 CRYGAP11844 174 aa11.66□□□□□ -0.54
CNOT3-204ENST00000447684 COX6A2Q02221 97 aa11.66□□□□□ -0.54
CNOT3-204ENST00000447684 BLCAPP62952 87 aa11.65□□□□□ -0.54
CNOT3-204ENST00000447684 PRIMA1Q86XR5 153 aa11.65□□□□□ -0.54
CNOT3-204ENST00000447684 CHCHD7Q9BUK0 85 aa11.65□□□□□ -0.54
CNOT3-204ENST00000447684 A0A087WVE0 104 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms