RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 FAM19A3Q7Z5A8 133 aa3.13□□□□□ -1.91
HLA-N-201ENST00000437516 UBE2E2Q96LR5 201 aa3.13□□□□□ -1.91
HLA-N-201ENST00000437516 DUX3Q96PT4 197 aa3.13□□□□□ -1.91
HLA-N-201ENST00000437516 PRORYQ9H606 182 aa3.13□□□□□ -1.91
HLA-N-201ENST00000437516 PCNX2A6NKB5 2137 aa3.13□□□□□ -1.91
HLA-N-201ENST00000437516 PTPRZ1P23471 2315 aaPredicted RBP3.12□□□□□ -1.91
HLA-N-201ENST00000437516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.12□□□□□ -1.91
HLA-N-201ENST00000437516 TEX49A0A1B0GTD5 131 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 FAM240AA0A1B0GVK7 77 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 IGKV2-29A2NJV5 120 aaPredicted RBP3.12□□□□□ -1.91
HLA-N-201ENST00000437516 CRLF1O75462 422 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 ACYP1P07311 99 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 HOXD3P31249 432 aaPredicted RBP3.12□□□□□ -1.91
HLA-N-201ENST00000437516 NDUFV3P56181 108 aaKnown RBP3.12□□□□□ -1.91
HLA-N-201ENST00000437516 BEAN1Q3B7T3 259 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 CEMP1Q6PRD7 247 aaPredicted RBP3.12□□□□□ -1.91
HLA-N-201ENST00000437516 TMEM61Q8N0U2 210 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 LINC01356Q8N9X3 169 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 COPS9Q8WXC6 57 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 TMEM101Q96IK0 257 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 PPDPFQ9H3Y8 114 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 SMG1Q96Q15 3661 aaKnown RBP3.12□□□□□ -1.91
HLA-N-201ENST00000437516 CEP250Q9BV73 2442 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 TNCP24821 2201 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 TENM4Q6N022 2769 aa3.12□□□□□ -1.91
HLA-N-201ENST00000437516 RBMY1BA6NDE4 496 aaKnown RBP3.11□□□□□ -1.91
HLA-N-201ENST00000437516 RBMY1EA6NEQ0 496 aaKnown RBP3.11□□□□□ -1.91
HLA-N-201ENST00000437516 GAGE12JA6NER3 117 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 A8MZ25 164 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 COX7A2LO14548 114 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 GAGE7O76087 117 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 RBMY1DP0C7P1 496 aaKnown RBP3.11□□□□□ -1.91
HLA-N-201ENST00000437516 GAGE12FP0CL80 117 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 GAGE12GP0CL81 117 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 GAGE12IP0CL82 117 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 NPC2P61916 151 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 HERVK_113P63121 156 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 GAGE4Q13068 117 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 RNASE13Q5GAN3 156 aaKnown RBP3.11□□□□□ -1.91
HLA-N-201ENST00000437516 DGAT2L7PQ6IED9 249 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 Q6YL49 198 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 Q6ZSN1 163 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 Q6ZSV7 163 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 C11orf72Q8NBR9 251 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 LINC00308Q8TCZ7 52 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 CLEC2BQ92478 149 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 LINC01587Q99440 93 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 CITED2Q99967 270 aaPredicted RBP3.11□□□□□ -1.91
HLA-N-201ENST00000437516 ZNF702PQ9H963 129 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 PEMTQ9UBM1 199 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 CDKN2A-AS1Q9UH64 79 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 LAMA1P25391 3075 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 ZGRF1Q86YA3 2104 aa3.11□□□□□ -1.91
HLA-N-201ENST00000437516 SPG11Q96JI7 2443 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 IGHV3-38A0A0C4DH36 116 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 IGLV5-39A0A0G2JS06 123 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 B5MCH6 92 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 FSHBP01225 129 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 INSP01308 110 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 HTN1P15515 57 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 SLURP1P55000 103 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 HERV-K104P63124 156 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 COX6A2Q02221 97 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 KRTAP21-3Q3LHN1 58 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 SHISA2Q6UWI4 295 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 IMUPQ9GZP8 106 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 MAP6D1Q9H9H5 199 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 SS18L2Q9UHA2 77 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 VPREB3Q9UKI3 123 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 CSDC2Q9Y534 153 aaKnown RBP3.1□□□□□ -1.91
HLA-N-201ENST00000437516 WDR87Q6ZQQ6 2873 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 ARFGEF3Q5TH69 2177 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 MALRD1Q5VYJ5 2156 aa3.1□□□□□ -1.91
HLA-N-201ENST00000437516 DMXL1Q9Y485 3027 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 IGHV3OR16-12A0A075B7B8 117 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 A0A096LNT2 108 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 TRAV25A0A0B4J276 109 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 TRBV10-1A0A0K0K1A3 114 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 TRBV7-7A0A0K0K1E9 115 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 SMIM1B2RUZ4 78 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 CCDC179H3BU77 68 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 TRACP01848 142 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 PF4P02776 101 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 RPL36AP83881 106 aaKnown RBP3.09□□□□□ -1.91
HLA-N-201ENST00000437516 MEIG1Q5JSS6 88 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 LINC00242Q5T6M2 205 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 SOSTDC1Q6X4U4 206 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 Q8N2B8 174 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 IL17DQ8TAD2 202 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 DYNLRB2Q8TF09 96 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 RPL36ALQ969Q0 106 aaKnown RBP3.09□□□□□ -1.91
HLA-N-201ENST00000437516 Q9H8V8 135 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 Q9UF83 564 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 WDFY3Q8IZQ1 3526 aa3.09□□□□□ -1.91
HLA-N-201ENST00000437516 JMJD1CQ15652 2540 aa3.09□□□□□ -1.92
HLA-N-201ENST00000437516 K7EQD1 137 aa3.08□□□□□ -1.92
HLA-N-201ENST00000437516 PRM2P04554 102 aa3.08□□□□□ -1.92
HLA-N-201ENST00000437516 CMC4P56277 68 aaPredicted RBP3.08□□□□□ -1.92
HLA-N-201ENST00000437516 DAZ2Q13117 558 aaKnown RBP3.08□□□□□ -1.92
HLA-N-201ENST00000437516 DEFB114Q30KQ6 69 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms