RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 COX7A1P24310 79 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 UBE2BP63146 152 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 ENHOQ6UWT2 76 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 SND1-IT1Q9HBX3 110 aa4.09□□□□□ -1.75
VTI1BP4-201ENST00000427516 DNAH12Q6ZR08 3092 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 A0A087WWL8 130 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 IGHV3-16A0A0C4DH30 117 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 NDUFS5O43920 106 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 EDN2P20800 178 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 FUSP35637 526 aaKnown RBP eCLIP4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 DAD1P61803 113 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 PDE4DIPQ5VU43 2346 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 FAM19A1Q7Z5A9 133 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 Q8N2B8 174 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 USMG5Q96IX5 58 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 LINC00167Q96N53 147 aa4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 OPRPNQ99935 248 aaPredicted RBP4.08□□□□□ -1.76
VTI1BP4-201ENST00000427516 MED12Q93074 2177 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 IGHV1OR15-1A0A075B7D0 117 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 CLPSL1A2RUU4 121 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 ODF3BA8MYP8 253 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 ZNF561-AS1K7EIQ3 104 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 PRYO14603 147 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 LECT2O14960 151 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 NBL1P41271 181 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 Q1T7F1 81 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 PRR9Q5T870 116 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 CLEC19AQ6UXS0 136 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 Q8N6K4 173 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 PRSS33Q8NF86 280 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 MUC7Q8TAX7 377 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 TMEM254Q8TBM7 123 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 RNASE6Q93091 150 aaKnown RBP4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 ZNF625Q96I27 306 aaPredicted RBP4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 KRTAP4-2Q9BYR5 136 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 Q9HAA7 133 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 GON4LQ3T8J9 2241 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 PI4KAP42356 2102 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 DSCAMO60469 2012 aa4.07□□□□□ -1.76
VTI1BP4-201ENST00000427516 NAV3Q8IVL0 2385 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 UBE2L6O14933 153 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 GNRH2O43555 120 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 SAA4P35542 130 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 MIR7-3HGQ8N6C7 128 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 CDKN2A-AS1Q9UH64 79 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 C22orf24Q9Y442 160 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 S4R3C0 116 aa4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 GOLGB1Q14789 3259 aaKnown RBP4.06□□□□□ -1.76
VTI1BP4-201ENST00000427516 FREM1Q5H8C1 2179 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 PRR14LQ5THK1 2151 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 IGHV7-81A0A0B4J1V7 117 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 TRBV7-4A0A0J9YYF1 115 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 SMIM1B2RUZ4 78 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 K7EMT4 169 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 NDUFB1O75438 58 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 LY6G6DO95868 133 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 IGHV3-23P01764 117 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 RPL36AP83881 106 aaKnown RBP4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 FAM27E3Q08E93 113 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 NREPQ16612 68 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 ECSCRQ19T08 205 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 LYPD2Q6UXB3 125 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 Q6ZSV7 163 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 SMIM11BQ8TCY0 68 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 RPL36ALQ969Q0 106 aaKnown RBP4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 FAM218AQ96MZ4 157 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 COL27A1Q8IZC6 1860 aaPredicted RBP4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 F5P12259 2224 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 MYO7AQ13402 2215 aa4.05□□□□□ -1.76
VTI1BP4-201ENST00000427516 INTS1Q8N201 2190 aaKnown RBP4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 CENPFP49454 3210 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 A0A087WYN8 130 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 A0A087WZ39 114 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 TRBV10-1A0A0K0K1A3 114 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 TMEM89A2RUT3 159 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 A8MZ25 164 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 NCR3O14931 201 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 UBE2AP49459 152 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 CDSNQ15517 529 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 C9orf66Q5T8R8 295 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 CCDC140Q96MF4 163 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 RETNQ9HD89 108 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 DOCK7Q96N67 2140 aa4.04□□□□□ -1.76
VTI1BP4-201ENST00000427516 ASCC3Q8N3C0 2202 aaKnown RBP4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 IGHV3-66A0A0C4DH42 116 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 A0A1B0GW54 56 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 TRBV6-4A0A1B0GX49 114 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 CCL21O00585 134 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 LINC00158P58513 81 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 HAMPP81172 84 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 DEFB114Q30KQ6 69 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 IGFL2Q6UWQ7 119 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 Q8N814 137 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 COX7B2Q8TF08 81 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 CHCHD7Q9BUK0 85 aa4.03□□□□□ -1.76
VTI1BP4-201ENST00000427516 ZNF580Q9UK33 172 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms