RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 A0A0D9SG42 100 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 TRBV10-1A0A0K0K1A3 114 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 SPAARA0A1B0GVQ0 90 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 ZNF137PP52743 207 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 MIC13Q5XKP0 118 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 SCIMPQ6UWF3 145 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 CTAGE3PQ8IX95 158 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 DYNLRB2Q8TF09 96 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 FAIMQ9NVQ4 179 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 Q9Y3F1 56 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
CD47-203ENST00000398258 MAST4O15021 2626 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 FAM208BQ5VWN6 2430 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 A0A0G2JMZ2 1700 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 SPTBN4Q9H254 2564 aa0.44□□□□□ -2.34
CD47-203ENST00000398258 ARFGEF1Q9Y6D6 1849 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 SPTBP11277 2137 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 ZGRF1Q86YA3 2104 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 RGPD8O14715 1765 aaPredicted RBP0.43□□□□□ -2.34
CD47-203ENST00000398258 RGPD5Q99666 1765 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 CXorf51AA0A1B0GTR3 108 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 J3QLW9 94 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 M0R2P5 195 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 YPEL1O60688 119 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 C10orf99Q6UWK7 81 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 PPDPFLQ8WWR9 84 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 IFI27L1Q96BM0 104 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 DPH3P1Q9H4G8 78 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 TPT1P8Q9HAU6 139 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 CDC42BPAQ5VT25 1732 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 FMN2Q9NZ56 1722 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 ANKRD26Q9UPS8 1709 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 ZNF292O60281 2723 aa0.43□□□□□ -2.34
CD47-203ENST00000398258 BDP1A6H8Y1 2624 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 LRRC37AA6NMS7 1700 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 ARAP2Q8WZ64 1704 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 IFT172Q9UG01 1749 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 CHD6Q8TD26 2715 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 ABCA4P78363 2273 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 LCE6AA0A183 80 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 TCRBV3S1A0A5B6 114 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 TNRC18O15417 2968 aaPredicted RBP0.42□□□□□ -2.34
CD47-203ENST00000398258 APOC1P02654 83 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 APODP05090 189 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 TSPAN19P0C672 248 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 RPS25P62851 125 aaKnown RBP0.42□□□□□ -2.34
CD47-203ENST00000398258 LINC01545Q5VT33 79 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 TSKUQ8WUA8 353 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 TMEM141Q96I45 108 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 VPS25Q9BRG1 176 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 FAM107BQ9H098 131 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 SAR1AQ9NR31 198 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 NDUFA12Q9UI09 145 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 GCN1Q92616 2671 aaKnown RBP0.42□□□□□ -2.34
CD47-203ENST00000398258 BTAF1O14981 1849 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 KIAA1549LQ6ZVL6 1849 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 EP400Q96L91 3159 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 EPG5Q9HCE0 2579 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 FANCMQ8IYD8 2048 aa0.42□□□□□ -2.34
CD47-203ENST00000398258 KNDC1Q76NI1 1749 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 DOT1LQ8TEK3 1739 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 NAV3Q8IVL0 2385 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 ZFC3H1O60293 1989 aaKnown RBP0.41□□□□□ -2.34
CD47-203ENST00000398258 FLNBO75369 2602 aaKnown RBP0.41□□□□□ -2.34
CD47-203ENST00000398258 CEP290O15078 2479 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 TTC28Q96AY4 2481 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 PTPRDP23468 1912 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 TRAV2A0A0B4J234 112 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 NPFFO15130 113 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 PIRTP0C851 137 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 FXYD6P3P58550 94 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 ELOF1P60002 83 aaKnown RBP0.41□□□□□ -2.34
CD47-203ENST00000398258 COPZ1P61923 177 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 SPINK13Q1W4C9 94 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 DEFB121Q5J5C9 76 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 SMIM5Q71RC9 77 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 DPH3Q96FX2 82 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 PFDN5Q99471 154 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 PSMG3Q9BT73 122 aaPredicted RBP0.41□□□□□ -2.34
CD47-203ENST00000398258 TMEM14BQ9NUH8 114 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 LTN1O94822 1766 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 KDM3BQ7LBC6 1761 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 TANC2Q9HCD6 1990 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 LY75O60449 1722 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 DDX60Q8IY21 1712 aaKnown RBP0.41□□□□□ -2.34
CD47-203ENST00000398258 TOGARAM1Q9Y4F4 1720 aa0.41□□□□□ -2.34
CD47-203ENST00000398258 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
CD47-203ENST00000398258 SCN11AQ9UI33 1791 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 FER1L6Q2WGJ9 1857 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 TEX49A0A1B0GTD5 131 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 ZNF670-ZNF695F2Z2N8 137 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 PITX3O75364 302 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 SPINK7P58062 85 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 ARPC4P59998 168 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 NPC2P61916 151 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 RRAS2P62070 204 aaPredicted RBP0.4□□□□□ -2.35
CD47-203ENST00000398258 KLKP1Q107X0 134 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 DEFB109BQ30KR1 87 aa0.4□□□□□ -2.35
CD47-203ENST00000398258 CCDC58Q4VC31 144 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms