RNA–Protein interactions for RNA: ENST00000391066.1

RNU6-1000P-201, Transcript of RNA, U6 small nuclear 1000, pseudogene, humanhuman

BASIC

Gene RNU6-1000P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1000P-201ENST00000391066 PITX3O75364 302 aa-1.31□□□□□ -2.62
RNU6-1000P-201ENST00000391066 CFAP126Q5VTH2 177 aa-1.31□□□□□ -2.62
RNU6-1000P-201ENST00000391066 ARHGEF10O15013 1369 aa-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 PKHD1P08F94 4074 aa-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 MAP1BP46821 2468 aaKnown RBP-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 SMIM6P0DI80 62 aa-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 ZNF818PQ6ZRF7 136 aa-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 TAC4Q86UU9 113 aa-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 SPCS1Q9Y6A9 102 aa-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 USP9YO00507 2555 aaPredicted RBP-1.32□□□□□ -2.62
RNU6-1000P-201ENST00000391066 TMEM2Q9UHN6 1383 aa-1.33□□□□□ -2.62
RNU6-1000P-201ENST00000391066 SCN3BQ9NY72 215 aa-1.33□□□□□ -2.62
RNU6-1000P-201ENST00000391066 DISP2A7MBM2 1401 aa-1.33□□□□□ -2.62
RNU6-1000P-201ENST00000391066 HECTD1Q9ULT8 2610 aa-1.34□□□□□ -2.62
RNU6-1000P-201ENST00000391066 NBPF19A0A087WUL8 3843 aa-1.34□□□□□ -2.62
RNU6-1000P-201ENST00000391066 HIST1H1AQ02539 215 aaPredicted RBP-1.34□□□□□ -2.62
RNU6-1000P-201ENST00000391066 Q6ZUT4 128 aa-1.34□□□□□ -2.62
RNU6-1000P-201ENST00000391066 WNK3Q9BYP7 1800 aa-1.35□□□□□ -2.63
RNU6-1000P-201ENST00000391066 AIF1LQ9BQI0 150 aa-1.35□□□□□ -2.63
RNU6-1000P-201ENST00000391066 PLCE1Q9P212 2302 aa-1.35□□□□□ -2.63
RNU6-1000P-201ENST00000391066 KDM3BQ7LBC6 1761 aa-1.36□□□□□ -2.63
RNU6-1000P-201ENST00000391066 IL5P05113 134 aa-1.36□□□□□ -2.63
RNU6-1000P-201ENST00000391066 TSPAN19P0C672 248 aa-1.36□□□□□ -2.63
RNU6-1000P-201ENST00000391066 PIPP12273 146 aaPredicted RBP-1.36□□□□□ -2.63
RNU6-1000P-201ENST00000391066 CTAGE3PQ8IX95 158 aa-1.36□□□□□ -2.63
RNU6-1000P-201ENST00000391066 SPTSSBQ8NFR3 76 aa-1.36□□□□□ -2.63
RNU6-1000P-201ENST00000391066 NPVFQ9HCQ7 196 aa-1.36□□□□□ -2.63
RNU6-1000P-201ENST00000391066 LAMC1P11047 1609 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 BCL9LQ86UU0 1499 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 PRG4Q92954 1404 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 PLXNB2O15031 1838 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 FLNBO75369 2602 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 BCE1O60756 84 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 SCGB1A1P11684 91 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 CBLN1P23435 193 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 PSMG3Q9BT73 122 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 MRPL40Q9NQ50 206 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 LAMA2P24043 3122 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 SVEP1Q4LDE5 3571 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 TGP01266 2768 aa-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 SPTBN1Q01082 2364 aaKnown RBP-1.37□□□□□ -2.63
RNU6-1000P-201ENST00000391066 EPG5Q9HCE0 2579 aa-1.38□□□□□ -2.63
RNU6-1000P-201ENST00000391066 DNAH6Q9C0G6 4158 aa-1.38□□□□□ -2.63
RNU6-1000P-201ENST00000391066 NPFFO15130 113 aa-1.38□□□□□ -2.63
RNU6-1000P-201ENST00000391066 LINC00694P0DN24 101 aa-1.38□□□□□ -2.63
RNU6-1000P-201ENST00000391066 LINC00312Q9Y6C7 94 aa-1.38□□□□□ -2.63
RNU6-1000P-201ENST00000391066 ITPR3Q14573 2671 aa-1.39□□□□□ -2.63
RNU6-1000P-201ENST00000391066 NCR2O95944 276 aa-1.39□□□□□ -2.63
RNU6-1000P-201ENST00000391066 CCL18P55774 89 aa-1.39□□□□□ -2.63
RNU6-1000P-201ENST00000391066 MXRA5Q9NR99 2828 aa-1.39□□□□□ -2.63
RNU6-1000P-201ENST00000391066 MUC17Q685J3 4493 aa-1.39□□□□□ -2.63
RNU6-1000P-201ENST00000391066 C10orf71Q711Q0 1435 aa-1.4□□□□□ -2.63
RNU6-1000P-201ENST00000391066 LRP6O75581 1613 aa-1.4□□□□□ -2.63
RNU6-1000P-201ENST00000391066 MYH6P13533 1939 aa-1.4□□□□□ -2.63
RNU6-1000P-201ENST00000391066 SMIM3Q9BZL3 60 aa-1.4□□□□□ -2.63
RNU6-1000P-201ENST00000391066 DNAH3Q8TD57 4116 aa-1.4□□□□□ -2.63
RNU6-1000P-201ENST00000391066 WNK1Q9H4A3 2382 aa-1.4□□□□□ -2.63
RNU6-1000P-201ENST00000391066 CASKIN1Q8WXD9 1431 aa-1.4□□□□□ -2.63
RNU6-1000P-201ENST00000391066 PXDNQ92626 1479 aa-1.41□□□□□ -2.63
RNU6-1000P-201ENST00000391066 DNHD1Q96M86 4753 aa-1.41□□□□□ -2.64
RNU6-1000P-201ENST00000391066 CCL8P80075 99 aa-1.41□□□□□ -2.64
RNU6-1000P-201ENST00000391066 SPTSSAQ969W0 71 aa-1.41□□□□□ -2.64
RNU6-1000P-201ENST00000391066 PKHD1L1Q86WI1 4243 aa-1.42□□□□□ -2.64
RNU6-1000P-201ENST00000391066 B2MP61769 119 aa-1.42□□□□□ -2.64
RNU6-1000P-201ENST00000391066 RRAS2P62070 204 aaPredicted RBP-1.42□□□□□ -2.64
RNU6-1000P-201ENST00000391066 TEP1Q99973 2627 aaKnown RBP-1.42□□□□□ -2.64
RNU6-1000P-201ENST00000391066 PRDM2Q13029 1718 aa-1.43□□□□□ -2.64
RNU6-1000P-201ENST00000391066 J3QR89 54 aa-1.43□□□□□ -2.64
RNU6-1000P-201ENST00000391066 SPRR2BP35325 72 aa-1.43□□□□□ -2.64
RNU6-1000P-201ENST00000391066 S100A7L2Q5SY68 101 aa-1.43□□□□□ -2.64
RNU6-1000P-201ENST00000391066 USF3Q68DE3 2245 aa-1.43□□□□□ -2.64
RNU6-1000P-201ENST00000391066 NWD2Q9ULI1 1742 aa-1.43□□□□□ -2.64
RNU6-1000P-201ENST00000391066 NDUFB6O95139 128 aa-1.44□□□□□ -2.64
RNU6-1000P-201ENST00000391066 SCIMPQ6UWF3 145 aa-1.44□□□□□ -2.64
RNU6-1000P-201ENST00000391066 TP53AIP1Q9HCN2 124 aa-1.44□□□□□ -2.64
RNU6-1000P-201ENST00000391066 GSKIPQ9P0R6 139 aa-1.44□□□□□ -2.64
RNU6-1000P-201ENST00000391066 CSPG4Q6UVK1 2322 aa-1.44□□□□□ -2.64
RNU6-1000P-201ENST00000391066 SNCGO76070 127 aa-1.45□□□□□ -2.64
RNU6-1000P-201ENST00000391066 CKS1BP61024 79 aa-1.45□□□□□ -2.64
RNU6-1000P-201ENST00000391066 PIEZO2Q9H5I5 2752 aa-1.45□□□□□ -2.64
RNU6-1000P-201ENST00000391066 ABCA13Q86UQ4 5058 aa-1.45□□□□□ -2.64
RNU6-1000P-201ENST00000391066 ERCC6L2Q5T890 1561 aa-1.46□□□□□ -2.64
RNU6-1000P-201ENST00000391066 HAMPP81172 84 aa-1.46□□□□□ -2.64
RNU6-1000P-201ENST00000391066 RBM3P98179 157 aaKnown RBP-1.46□□□□□ -2.64
RNU6-1000P-201ENST00000391066 DNAH2Q9P225 4427 aa-1.46□□□□□ -2.64
RNU6-1000P-201ENST00000391066 I3L2K1 104 aa-1.47□□□□□ -2.64
RNU6-1000P-201ENST00000391066 M0R2Z0 102 aa-1.47□□□□□ -2.64
RNU6-1000P-201ENST00000391066 S100A3P33764 101 aa-1.47□□□□□ -2.64
RNU6-1000P-201ENST00000391066 ALX1Q15699 326 aa-1.47□□□□□ -2.64
RNU6-1000P-201ENST00000391066 AGPAT4-IT1Q9H0P7 198 aa-1.47□□□□□ -2.64
RNU6-1000P-201ENST00000391066 PLECQ15149 4684 aaKnown RBP-1.47□□□□□ -2.65
RNU6-1000P-201ENST00000391066 FASNP49327 2511 aaKnown RBP-1.47□□□□□ -2.65
RNU6-1000P-201ENST00000391066 LRRC37A2A6NM11 1700 aa-1.48□□□□□ -2.65
RNU6-1000P-201ENST00000391066 PPP1R17O96001 155 aa-1.48□□□□□ -2.65
RNU6-1000P-201ENST00000391066 DCDP81605 110 aaKnown RBP-1.48□□□□□ -2.65
RNU6-1000P-201ENST00000391066 SEC11CQ9BY50 192 aa-1.48□□□□□ -2.65
RNU6-1000P-201ENST00000391066 R4GMQ9 66 aa-1.48□□□□□ -2.65
RNU6-1000P-201ENST00000391066 GVINP1Q7Z2Y8 2422 aa-1.48□□□□□ -2.65
RNU6-1000P-201ENST00000391066 MRC1P22897 1456 aa-1.49□□□□□ -2.65
RNU6-1000P-201ENST00000391066 IFT140Q96RY7 1462 aa-1.49□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms