RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 TMEM191AQ9H0A3 160 aa-0.27□□□□□ -2.45
RNU6-440P-201ENST00000390882 R4GMQ9 66 aa-0.27□□□□□ -2.45
RNU6-440P-201ENST00000390882 UBR5O95071 2799 aaPredicted RBP-0.27□□□□□ -2.45
RNU6-440P-201ENST00000390882 GPR98Q8WXG9 6306 aa-0.27□□□□□ -2.45
RNU6-440P-201ENST00000390882 C10orf71Q711Q0 1435 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 PATJQ8NI35 1801 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 DOCK2Q92608 1830 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 TRAV13-2A0A0B4J235 113 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 SIX6O95475 246 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 PPP1R17O96001 155 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 PRM1P04553 51 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 S100A3P33764 101 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 SPRR1AP35321 89 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 HAMPP81172 84 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 SPAG11BQ08648 103 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 SMCO1Q147U7 214 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 SMIM4Q8WVI0 70 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 CCDC167Q9P0B6 97 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 LENEPQ9Y5L5 61 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 DOPEY2Q9Y3R5 2298 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 ARAP2Q8WZ64 1704 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 KIF21AQ7Z4S6 1674 aa-0.28□□□□□ -2.45
RNU6-440P-201ENST00000390882 FLNCQ14315 2725 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 FAM208BQ5VWN6 2430 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 PIGBOS1A0A0B4J2F0 54 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 CTXND1A0A1B0GTU2 59 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 HCG22E2RYF7 251 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 M0R135 149 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 BCE1O60756 84 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 DCDP81605 110 aaKnown RBP-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 COX17Q14061 63 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 MAFIPQ8WZ33 124 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 AQP10Q96PS8 301 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 SDF2Q99470 211 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 AGPAT4-IT1Q9H0P7 198 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 TP53AIP1Q9HCN2 124 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 V9GYH0 126 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 PAPPAQ13219 1627 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 DOCK1Q14185 1865 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 SBF2Q86WG5 1849 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 ZNF236Q9UL36 1845 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 CFTRP13569 1480 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 MYCBP2O75592 4640 aa-0.29□□□□□ -2.46
RNU6-440P-201ENST00000390882 PPIP5K1Q6PFW1 1433 aa-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 LPAP08519 4548 aa-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 C12orf73Q69YU5 71 aa-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 COPS9Q8WXC6 57 aa-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 PFDN5Q99471 154 aa-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 PDCD10Q9BUL8 212 aa-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 HSPG2P98160 4391 aa-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 SYNE2Q8WXH0 6885 aaKnown RBP-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 RIMS1Q86UR5 1692 aaKnown RBP-0.3□□□□□ -2.46
RNU6-440P-201ENST00000390882 TSC2P49815 1807 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 BICRAQ9NZM4 1560 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 FXYD6-FXYD2A0A087WZ82 144 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 I3L2K1 104 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 C10orf128Q5T292 105 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 SPAG11AQ6PDA7 123 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 DPH3Q96FX2 82 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 AMELXQ99217 191 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 PHLPP1O60346 1717 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 ALMS1Q8TCU4 4167 aa-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.31□□□□□ -2.46
RNU6-440P-201ENST00000390882 SPTBN2O15020 2390 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 PTPN13Q12923 2485 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 PKDREJQ9NTG1 2253 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 WDR7Q9Y4E6 1490 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 TRBV6-1A0A0K0K1D8 114 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 RBM3P98179 157 aaKnown RBP-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 PIGYQ3MUY2 71 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 TMEM170BQ5T4T1 132 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 Q6AWC8 147 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 TTC9CQ8N5M4 171 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 Q8N8P6 123 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 PAIP2BQ9ULR5 123 aaKnown RBP-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 KMT2AQ03164 3969 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 SHROOM2Q13796 1616 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 PTPRQQ9UMZ3 2332 aa-0.32□□□□□ -2.46
RNU6-440P-201ENST00000390882 KDM5AP29375 1690 aaKnown RBP-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 AKAP6Q13023 2319 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 RAPGEF6Q8TEU7 1601 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 K7EQZ3 153 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 APOC3P02656 99 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 HIST1H1DP16402 221 aaKnown RBP-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 ARPC4P59998 168 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 Q6JHZ5 121 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 SERP1Q9Y6X1 66 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 MYOM1P52179 1685 aa-0.33□□□□□ -2.46
RNU6-440P-201ENST00000390882 LRP2P98164 4655 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 LOC105371267A0A1B0GV96 52 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 UQCR11O14957 56 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 SPRR2BP35325 72 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 TPPP2P59282 170 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 TENM4Q6N022 2769 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 BAGE2Q86Y30 109 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 LSM10Q969L4 123 aaKnown RBP-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 RERGLQ9H628 205 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 NDUFA4L2Q9NRX3 87 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 TNXBP22105 4242 aa-0.34□□□□□ -2.46
RNU6-440P-201ENST00000390882 CSMD3Q7Z407 3707 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms