RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 KLK9Q2XQG4 91 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 CCL19Q99731 98 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 KLK9Q9UKQ9 250 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 ABCA2Q9BZC7 2435 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 SPG11Q96JI7 2443 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 BUB3O43684 328 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 CIRBPQ14011 172 aaKnown RBP11.56□□□□□ -0.56
FXN-201ENST00000377270 SERP1Q9Y6X1 66 aa11.56□□□□□ -0.56
FXN-201ENST00000377270 IGHV3OR16-13A0A075B7E8 117 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 IGHV3-74A0A0B4J1X5 117 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 IGHV1-69P01742 117 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 CELSR1Q9NYQ6 3014 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 TSPEAR-AS2P59090 65 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
FXN-201ENST00000377270 FAM223AQ8IWN6 122 aa11.55□□□□□ -0.56
FXN-201ENST00000377270 FLNCQ14315 2725 aa11.54□□□□□ -0.56
FXN-201ENST00000377270 MOB4Q9Y3A3 225 aa11.54□□□□□ -0.56
FXN-201ENST00000377270 IGHV3-49A0A0A0MS15 119 aa11.54□□□□□ -0.56
FXN-201ENST00000377270 CLPSL1A2RUU4 121 aa11.54□□□□□ -0.56
FXN-201ENST00000377270 NDUFC2-KCTD14E9PQ53 114 aa11.54□□□□□ -0.56
FXN-201ENST00000377270 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
FXN-201ENST00000377270 MUSTN1Q8IVN3 82 aa11.54□□□□□ -0.56
FXN-201ENST00000377270 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
FXN-201ENST00000377270 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
FXN-201ENST00000377270 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
FXN-201ENST00000377270 ICOSQ9Y6W8 199 aa11.53□□□□□ -0.56
FXN-201ENST00000377270 IGSF10Q6WRI0 2623 aa11.52□□□□□ -0.56
FXN-201ENST00000377270 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.52□□□□□ -0.57
FXN-201ENST00000377270 PRAC2D3DTV9 90 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 NDUFC2O95298 119 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 PRSS2P07478 247 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 C2orf66Q6UXQ4 117 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 C11orf21Q9P2W6 132 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 IGHV7-4-1A0A0J9YVY3 117 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 DCANP1Q8TF63 244 aa11.52□□□□□ -0.57
FXN-201ENST00000377270 IGHV4-4A0A075B6R2 117 aa11.51□□□□□ -0.57
FXN-201ENST00000377270 LST1O00453 97 aa11.51□□□□□ -0.57
FXN-201ENST00000377270 IGHV4-38-2P0DP08 117 aa11.51□□□□□ -0.57
FXN-201ENST00000377270 SPANXN1Q5VSR9 72 aa11.51□□□□□ -0.57
FXN-201ENST00000377270 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
FXN-201ENST00000377270 SUMO2P61956 95 aaKnown RBP11.51□□□□□ -0.57
FXN-201ENST00000377270 LY6EQ16553 131 aa11.51□□□□□ -0.57
FXN-201ENST00000377270 Q96MF0 132 aa11.51□□□□□ -0.57
FXN-201ENST00000377270 SMIM26A0A096LP01 95 aa11.5□□□□□ -0.57
FXN-201ENST00000377270 COX6CP09669 75 aa11.5□□□□□ -0.57
FXN-201ENST00000377270 TIMM21Q9BVV7 248 aa11.5□□□□□ -0.57
FXN-201ENST00000377270 IGHV4-30-2A0A087WSY4 118 aa11.5□□□□□ -0.57
FXN-201ENST00000377270 USP9XQ93008 2570 aaPredicted RBP11.49□□□□□ -0.57
FXN-201ENST00000377270 C11orf86A6NJI1 115 aa11.49□□□□□ -0.57
FXN-201ENST00000377270 DOPEY1Q5JWR5 2465 aa11.49□□□□□ -0.57
FXN-201ENST00000377270 A0A087WVE0 104 aa11.49□□□□□ -0.57
FXN-201ENST00000377270 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
FXN-201ENST00000377270 AMELXQ99217 191 aa11.49□□□□□ -0.57
FXN-201ENST00000377270 USP17L23D6RBM5 183 aa11.48□□□□□ -0.57
FXN-201ENST00000377270 PMAIP1Q13794 54 aa11.48□□□□□ -0.57
FXN-201ENST00000377270 C19orf54Q5BKX5 351 aa11.48□□□□□ -0.57
FXN-201ENST00000377270 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
FXN-201ENST00000377270 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
FXN-201ENST00000377270 ACACBO00763 2458 aa11.47□□□□□ -0.57
FXN-201ENST00000377270 H3BUX3 64 aa11.47□□□□□ -0.57
FXN-201ENST00000377270 DAZ4Q86SG3 579 aaKnown RBP11.47□□□□□ -0.57
FXN-201ENST00000377270 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
FXN-201ENST00000377270 UTP20O75691 2785 aaKnown RBP11.47□□□□□ -0.57
FXN-201ENST00000377270 MYO18BQ8IUG5 2567 aa11.46□□□□□ -0.57
FXN-201ENST00000377270 CELSR2Q9HCU4 2923 aa11.46□□□□□ -0.57
FXN-201ENST00000377270 U3KQE9 123 aa11.46□□□□□ -0.58
FXN-201ENST00000377270 IGKV3D-7A0A0C4DH55 119 aa11.45□□□□□ -0.58
FXN-201ENST00000377270 MSMBP08118 114 aa11.45□□□□□ -0.58
FXN-201ENST00000377270 SS18Q15532 418 aa11.45□□□□□ -0.58
FXN-201ENST00000377270 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
FXN-201ENST00000377270 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
FXN-201ENST00000377270 RPL39LQ96EH5 51 aaKnown RBP11.45□□□□□ -0.58
FXN-201ENST00000377270 CRYBG3Q68DQ2 2970 aa11.45□□□□□ -0.58
FXN-201ENST00000377270 IGF1P05019 195 aa11.44□□□□□ -0.58
FXN-201ENST00000377270 BLCAPP62952 87 aa11.44□□□□□ -0.58
FXN-201ENST00000377270 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
FXN-201ENST00000377270 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.584e-6■■■■□ 20.1
FXN-201ENST00000377270 A6NDX4 124 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 KNCNA6PVL3 124 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 UNQ9165/PRO28630Q6UXU0 137 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 APRG1Q8IVJ8 170 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 NACAE9PAV3 2078 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 IGHV3-11P01762 117 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 IGHG2P01859 326 aa11.43□□□□□ -0.58
FXN-201ENST00000377270 I3L3M4 83 aa11.42□□□□□ -0.58
FXN-201ENST00000377270 TSHBP01222 138 aa11.42□□□□□ -0.58
FXN-201ENST00000377270 Q6ZSV7 163 aa11.42□□□□□ -0.58
FXN-201ENST00000377270 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
FXN-201ENST00000377270 C20orf197Q8N268 126 aa11.41□□□□□ -0.58
FXN-201ENST00000377270 TRAV12-3A0A0B4J271 114 aa11.4□□□□□ -0.58
FXN-201ENST00000377270 B4DSR2 109 aa11.4□□□□□ -0.58
FXN-201ENST00000377270 DAZ2Q13117 558 aaKnown RBP11.4□□□□□ -0.58
FXN-201ENST00000377270 USMG5Q96IX5 58 aa11.4□□□□□ -0.58
FXN-201ENST00000377270 DAZ3Q9NR90 486 aaKnown RBP11.4□□□□□ -0.58
FXN-201ENST00000377270 M0R381 172 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms