RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 M0QXV9 152 aa11.81□□□□□ -0.52
FBXO28-201ENST00000366862 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
FBXO28-201ENST00000366862 SPTSSBQ8NFR3 76 aa11.81□□□□□ -0.52
FBXO28-201ENST00000366862 DOPEY2Q9Y3R5 2298 aa11.81□□□□□ -0.52
FBXO28-201ENST00000366862 CLPSL1A2RUU4 121 aa11.8□□□□□ -0.52
FBXO28-201ENST00000366862 SPART-AS1P0CW21 52 aa11.8□□□□□ -0.52
FBXO28-201ENST00000366862 GRNP28799 593 aaKnown RBP11.8□□□□□ -0.52
FBXO28-201ENST00000366862 IGHV4-61A0A0C4DH41 118 aa11.8□□□□□ -0.52
FBXO28-201ENST00000366862 Q6JHZ5 121 aa11.8□□□□□ -0.52
FBXO28-201ENST00000366862 SMAD5-AS1Q9Y6J3 95 aa11.79□□□□□ -0.52
FBXO28-201ENST00000366862 MRPS36P82909 103 aaKnown RBP11.79□□□□□ -0.52
FBXO28-201ENST00000366862 ZFP36P26651 326 aaKnown RBP11.79□□□□□ -0.52
FBXO28-201ENST00000366862 SMIM9A6NGZ8 99 aa11.78□□□□□ -0.52
FBXO28-201ENST00000366862 PIP4P1Q86T03 277 aa11.78□□□□□ -0.52
FBXO28-201ENST00000366862 CNOT1A5YKK6 2376 aaKnown RBP11.78□□□□□ -0.52
FBXO28-201ENST00000366862 SLPIP03973 132 aa11.78□□□□□ -0.52
FBXO28-201ENST00000366862 CNFNQ9BYD5 112 aa11.78□□□□□ -0.52
FBXO28-201ENST00000366862 C20orf173Q96LM9 149 aa11.77□□□□□ -0.52
FBXO28-201ENST00000366862 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.52
FBXO28-201ENST00000366862 GTF3C1Q12789 2109 aa11.77□□□□□ -0.52
FBXO28-201ENST00000366862 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.52
FBXO28-201ENST00000366862 NCOA6Q14686 2063 aaPredicted RBP11.77□□□□□ -0.53
FBXO28-201ENST00000366862 Q6ZS46 218 aa11.76□□□□□ -0.53
FBXO28-201ENST00000366862 IGF2-ASQ6U949 168 aa11.76□□□□□ -0.53
FBXO28-201ENST00000366862 EP300Q09472 2414 aaPredicted RBP11.76□□□□□ -0.53
FBXO28-201ENST00000366862 KIAA1549LQ6ZVL6 1849 aa11.76□□□□□ -0.53
FBXO28-201ENST00000366862 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
FBXO28-201ENST00000366862 SMIM26A0A096LP01 95 aa11.76□□□□□ -0.53
FBXO28-201ENST00000366862 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
FBXO28-201ENST00000366862 IGF1P05019 195 aa11.75□□□□□ -0.53
FBXO28-201ENST00000366862 CREBBPQ92793 2442 aa11.75□□□□□ -0.53
FBXO28-201ENST00000366862 C4orf3Q8WVX3 66 aa11.75□□□□□ -0.53
FBXO28-201ENST00000366862 A6NDX4 124 aa11.75□□□□□ -0.53
FBXO28-201ENST00000366862 PRO0255Q9UI72 69 aa11.75□□□□□ -0.53
FBXO28-201ENST00000366862 UBE2D1P51668 147 aa11.74□□□□□ -0.53
FBXO28-201ENST00000366862 FSTL3O95633 263 aa11.74□□□□□ -0.53
FBXO28-201ENST00000366862 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
FBXO28-201ENST00000366862 MAP6D1Q9H9H5 199 aa11.74□□□□□ -0.53
FBXO28-201ENST00000366862 UBE2D3P61077 147 aa11.74□□□□□ -0.53
FBXO28-201ENST00000366862 UBE2D2P62837 147 aa11.74□□□□□ -0.53
FBXO28-201ENST00000366862 ADAMTS9Q9P2N4 1935 aa11.74□□□□□ -0.53
FBXO28-201ENST00000366862 TSHBP01222 138 aa11.73□□□□□ -0.53
FBXO28-201ENST00000366862 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
FBXO28-201ENST00000366862 C9orf66Q5T8R8 295 aa11.73□□□□□ -0.53
FBXO28-201ENST00000366862 K7EQG2 157 aa11.73□□□□□ -0.53
FBXO28-201ENST00000366862 TMEM131Q92545 1883 aa11.73□□□□□ -0.53
FBXO28-201ENST00000366862 CACNA1HO95180 2353 aa11.72□□□□□ -0.53
FBXO28-201ENST00000366862 DYSFO75923 2080 aa11.72□□□□□ -0.53
FBXO28-201ENST00000366862 SCXQ7RTU7 201 aa11.72□□□□□ -0.53
FBXO28-201ENST00000366862 EBI3Q14213 229 aa11.72□□□□□ -0.53
FBXO28-201ENST00000366862 SERP1Q9Y6X1 66 aa11.72□□□□□ -0.53
FBXO28-201ENST00000366862 IGHV4-30-2A0A087WSY4 118 aa11.71□□□□□ -0.53
FBXO28-201ENST00000366862 LY6LH3BQJ8 138 aa11.71□□□□□ -0.53
FBXO28-201ENST00000366862 KLK12Q9UKR0 248 aa11.71□□□□□ -0.53
FBXO28-201ENST00000366862 SNURFQ9Y675 71 aa11.71□□□□□ -0.53
FBXO28-201ENST00000366862 KIF26AQ9ULI4 1882 aaPredicted RBP11.71□□□□□ -0.53
FBXO28-201ENST00000366862 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.54
FBXO28-201ENST00000366862 CACNA1GO43497 2377 aa11.7□□□□□ -0.54
FBXO28-201ENST00000366862 RNASE3P12724 160 aaKnown RBP11.7□□□□□ -0.54
FBXO28-201ENST00000366862 HRCT1Q6UXD1 115 aa11.7□□□□□ -0.54
FBXO28-201ENST00000366862 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
FBXO28-201ENST00000366862 ACACAQ13085 2346 aa11.69□□□□□ -0.54
FBXO28-201ENST00000366862 Q6ZTI0 123 aa11.69□□□□□ -0.54
FBXO28-201ENST00000366862 GAS8-AS1O95177 125 aa11.69□□□□□ -0.54
FBXO28-201ENST00000366862 H0Y9J4 135 aa11.68□□□□□ -0.54
FBXO28-201ENST00000366862 LINC01548A6NM66 108 aa11.68□□□□□ -0.54
FBXO28-201ENST00000366862 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
FBXO28-201ENST00000366862 SPTBN2O15020 2390 aa11.68□□□□□ -0.54
FBXO28-201ENST00000366862 REG3AQ06141 175 aa11.68□□□□□ -0.54
FBXO28-201ENST00000366862 C6orf99Q4VX62 202 aa11.68□□□□□ -0.54
FBXO28-201ENST00000366862 NCOR1O75376 2440 aa11.68□□□□□ -0.54
FBXO28-201ENST00000366862 COL4A4P53420 1690 aaPredicted RBP11.67□□□□□ -0.54
FBXO28-201ENST00000366862 IGIPA6NJ69 53 aa11.67□□□□□ -0.54
FBXO28-201ENST00000366862 A8MZ25 164 aa11.67□□□□□ -0.54
FBXO28-201ENST00000366862 UBE2AP49459 152 aa11.67□□□□□ -0.54
FBXO28-201ENST00000366862 FBXL19-AS1Q494R0 122 aa11.67□□□□□ -0.54
FBXO28-201ENST00000366862 ESM1Q9NQ30 184 aa11.67□□□□□ -0.54
FBXO28-201ENST00000366862 LYRM9A8MSI8 78 aa11.66□□□□□ -0.54
FBXO28-201ENST00000366862 UBE2D4Q9Y2X8 147 aa11.66□□□□□ -0.54
FBXO28-201ENST00000366862 TRAV7A0A075B6U4 112 aa11.66□□□□□ -0.54
FBXO28-201ENST00000366862 LINC00269Q8N2A0 174 aa11.66□□□□□ -0.54
FBXO28-201ENST00000366862 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
FBXO28-201ENST00000366862 CHCHD10Q8WYQ3 142 aaPredicted RBP11.66□□□□□ -0.54
FBXO28-201ENST00000366862 ZGRF1Q86YA3 2104 aa11.66□□□□□ -0.54
FBXO28-201ENST00000366862 DSCAML1Q8TD84 2053 aa11.65□□□□□ -0.54
FBXO28-201ENST00000366862 CCL18P55774 89 aa11.65□□□□□ -0.54
FBXO28-201ENST00000366862 SEC61GP60059 68 aa11.65□□□□□ -0.54
FBXO28-201ENST00000366862 DAZAP2Q15038 168 aaPredicted RBP11.65□□□□□ -0.54
FBXO28-201ENST00000366862 CCKP06307 115 aa11.65□□□□□ -0.54
FBXO28-201ENST00000366862 CACNA1BQ00975 2339 aa11.65□□□□□ -0.54
FBXO28-201ENST00000366862 FAM19A5Q7Z5A7 132 aaPredicted RBP11.64□□□□□ -0.55
FBXO28-201ENST00000366862 CRIP2P52943 208 aaPredicted RBP11.63□□□□□ -0.55
FBXO28-201ENST00000366862 PRR9Q5T870 116 aa11.63□□□□□ -0.55
FBXO28-201ENST00000366862 C9orf85Q96MD7 179 aa11.63□□□□□ -0.55
FBXO28-201ENST00000366862 KLLNB2CW77 178 aa11.63□□□□□ -0.55
FBXO28-201ENST00000366862 ADORA2A-AS1P86434 159 aa11.63□□□□□ -0.55
FBXO28-201ENST00000366862 TRBV6-8A0A0A6YYG3 113 aa11.63□□□□□ -0.55
FBXO28-201ENST00000366862 TRBV6-4A0A1B0GX49 114 aa11.63□□□□□ -0.55
FBXO28-201ENST00000366862 MIFP14174 115 aa11.63□□□□□ -0.55
FBXO28-201ENST00000366862 POM121L12Q8N7R1 296 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms