RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 IGHV7-81A0A0B4J1V7 117 aa9.74□□□□□ -0.85
IFT88-202ENST00000351808 M0QY20 66 aa9.74□□□□□ -0.85
IFT88-202ENST00000351808 FAM215AQ9Y5M1 114 aa9.74□□□□□ -0.85
IFT88-202ENST00000351808 LPAL2Q16609 132 aa9.74□□□□□ -0.85
IFT88-202ENST00000351808 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 RPL35AP18077 110 aaKnown RBP9.73□□□□□ -0.85
IFT88-202ENST00000351808 FAM223AQ8IWN6 122 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 FAM104AQ969W3 186 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 SPTBN1Q01082 2364 aaKnown RBP9.73□□□□□ -0.85
IFT88-202ENST00000351808 FAM223BA6NKX1 122 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 DNAL4O96015 105 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 IGKV3-7A0A075B6H7 116 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 HOXD3P31249 432 aaPredicted RBP9.73□□□□□ -0.85
IFT88-202ENST00000351808 LY6G5BQ8NDX9 201 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 LINC00308Q8TCZ7 52 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 ZNF625Q96I27 306 aaPredicted RBP9.73□□□□□ -0.85
IFT88-202ENST00000351808 LINC00846Q9NV44 126 aa9.73□□□□□ -0.85
IFT88-202ENST00000351808 C9orf129Q5T035 196 aaKnown RBP9.72□□□□□ -0.85
IFT88-202ENST00000351808 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
IFT88-202ENST00000351808 U3KQE9 123 aa9.72□□□□□ -0.85
IFT88-202ENST00000351808 APC2O95996 2303 aa9.72□□□□□ -0.85
IFT88-202ENST00000351808 FAM222AQ5U5X8 452 aa9.72□□□□□ -0.85
IFT88-202ENST00000351808 C14orf132Q9NPU4 83 aa9.72□□□□□ -0.85
IFT88-202ENST00000351808 Q6JHZ5 121 aa9.71□□□□□ -0.85
IFT88-202ENST00000351808 SPTBN2O15020 2390 aa9.71□□□□□ -0.86
IFT88-202ENST00000351808 EP300Q09472 2414 aaPredicted RBP9.7□□□□□ -0.86
IFT88-202ENST00000351808 TIMM17BO60830 172 aa9.7□□□□□ -0.86
IFT88-202ENST00000351808 G3V318 75 aa9.7□□□□□ -0.86
IFT88-202ENST00000351808 FAM110DQ8TAY7 271 aaPredicted RBP9.69□□□□□ -0.86
IFT88-202ENST00000351808 SVEP1Q4LDE5 3571 aa9.69□□□□□ -0.86
IFT88-202ENST00000351808 CIRBPQ14011 172 aaKnown RBP9.69□□□□□ -0.86
IFT88-202ENST00000351808 SOSTDC1Q6X4U4 206 aa9.69□□□□□ -0.86
IFT88-202ENST00000351808 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
IFT88-202ENST00000351808 LAMA5O15230 3695 aa9.68□□□□□ -0.86
IFT88-202ENST00000351808 ATP6V0E1O15342 81 aa9.68□□□□□ -0.86
IFT88-202ENST00000351808 HILS1P60008 231 aa9.68□□□□□ -0.86
IFT88-202ENST00000351808 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
IFT88-202ENST00000351808 PRORYQ9H606 182 aa9.68□□□□□ -0.86
IFT88-202ENST00000351808 PRO3102Q9H379 93 aa9.68□□□□□ -0.86
IFT88-202ENST00000351808 Q8N6K4 173 aa9.67□□□□□ -0.86
IFT88-202ENST00000351808 Q8N9W7 124 aa9.67□□□□□ -0.86
IFT88-202ENST00000351808 CDKN2A-AS1Q9UH64 79 aa9.67□□□□□ -0.86
IFT88-202ENST00000351808 UBE2D4Q9Y2X8 147 aa9.67□□□□□ -0.86
IFT88-202ENST00000351808 SOCS3O14543 225 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 NDUFC2O95298 119 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 GHRHP01286 108 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 C20orf197Q8N268 126 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 RELNP78509 3460 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 NDUFA1O15239 70 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 IGHG2P01859 326 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 Q9H8V8 135 aa9.66□□□□□ -0.86
IFT88-202ENST00000351808 FAM236DA0A1B0GTK5 79 aa9.65□□□□□ -0.86
IFT88-202ENST00000351808 TRBV12-3P01733 135 aa9.65□□□□□ -0.86
IFT88-202ENST00000351808 FAM236CP0DP71 79 aa9.65□□□□□ -0.86
IFT88-202ENST00000351808 EDN2P20800 178 aa9.65□□□□□ -0.86
IFT88-202ENST00000351808 UNQ9165/PRO28630Q6UXU0 137 aa9.65□□□□□ -0.86
IFT88-202ENST00000351808 C9orf85Q96MD7 179 aa9.65□□□□□ -0.86
IFT88-202ENST00000351808 WFDC11Q8NEX6 87 aa9.65□□□□□ -0.86
IFT88-202ENST00000351808 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.87
IFT88-202ENST00000351808 E7EQL1 145 aa9.65□□□□□ -0.87
IFT88-202ENST00000351808 NDUFC2-KCTD14E9PQ53 114 aa9.65□□□□□ -0.87
IFT88-202ENST00000351808 TMEM86BQ8N661 226 aa9.65□□□□□ -0.87
IFT88-202ENST00000351808 WFDC9Q8NEX5 89 aa9.65□□□□□ -0.87
IFT88-202ENST00000351808 KLK9Q9UKQ9 250 aa9.65□□□□□ -0.87
IFT88-202ENST00000351808 RPL28P46779 137 aaKnown RBP9.64□□□□□ -0.87
IFT88-202ENST00000351808 SEC61GP60059 68 aa9.64□□□□□ -0.87
IFT88-202ENST00000351808 DMXL1Q9Y485 3027 aa9.64□□□□□ -0.87
IFT88-202ENST00000351808 TECTAO75443 2155 aa9.64□□□□□ -0.87
IFT88-202ENST00000351808 ODF3BA8MYP8 253 aa9.64□□□□□ -0.87
IFT88-202ENST00000351808 KLLNB2CW77 178 aa9.64□□□□□ -0.87
IFT88-202ENST00000351808 TRAV12-2A0A075B6T6 113 aa9.63□□□□□ -0.87
IFT88-202ENST00000351808 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.63□□□□□ -0.87
IFT88-202ENST00000351808 IGHV3-73A0A0B4J1V6 119 aa9.63□□□□□ -0.87
IFT88-202ENST00000351808 IGHV3-16A0A0C4DH30 117 aa9.63□□□□□ -0.87
IFT88-202ENST00000351808 RBMY1BA6NDE4 496 aaKnown RBP9.62□□□□□ -0.87
IFT88-202ENST00000351808 RBMY1EA6NEQ0 496 aaKnown RBP9.62□□□□□ -0.87
IFT88-202ENST00000351808 RBMY1DP0C7P1 496 aaKnown RBP9.62□□□□□ -0.87
IFT88-202ENST00000351808 RBMY1A1P0DJD3 496 aaKnown RBP9.62□□□□□ -0.87
IFT88-202ENST00000351808 RBMY1CP0DJD4 496 aa9.62□□□□□ -0.87
IFT88-202ENST00000351808 RBMY1FQ15415 496 aaKnown RBP9.62□□□□□ -0.87
IFT88-202ENST00000351808 IGFL2Q6UWQ7 119 aa9.62□□□□□ -0.87
IFT88-202ENST00000351808 SERP1Q9Y6X1 66 aa9.62□□□□□ -0.87
IFT88-202ENST00000351808 CUL9Q8IWT3 2517 aa9.62□□□□□ -0.87
IFT88-202ENST00000351808 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.61□□□□□ -0.87
IFT88-202ENST00000351808 A0A087WYN8 130 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 IGKV2-29A2NJV5 120 aaPredicted RBP9.61□□□□□ -0.87
IFT88-202ENST00000351808 XCL1P47992 114 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 PIK3CD-AS1Q5SR53 167 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 HIST2H2BCQ6DN03 193 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 HIST2H2BDQ6DRA6 164 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 XCL2Q9UBD3 114 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 PTPRZ1P23471 2315 aaPredicted RBP9.61□□□□□ -0.87
IFT88-202ENST00000351808 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 NCR3O14931 201 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 PROK1P58294 105 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 ZNF415Q09FC8 603 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 DEFB123Q8N688 67 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 PSMB8P28062 276 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 MINOS1Q5TGZ0 78 aa9.61□□□□□ -0.87
IFT88-202ENST00000351808 DCHS2Q6V1P9 2916 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 425.9 ms