RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 MRPS36P82909 103 aaKnown RBP14.99□□□□□ -0.01
RUNX3-202ENST00000338888 TMEM61Q8N0U2 210 aa14.99□□□□□ -0.01
RUNX3-202ENST00000338888 UBTD1Q9HAC8 227 aa14.99□□□□□ -0.01
RUNX3-202ENST00000338888 TRBV7-7A0A0K0K1E9 115 aa14.98□□□□□ -0.01
RUNX3-202ENST00000338888 LINC01587Q99440 93 aa14.98□□□□□ -0.01
RUNX3-202ENST00000338888 BRI3O95415 125 aa14.97□□□□□ -0.01
RUNX3-202ENST00000338888 ID1P41134 155 aa14.97□□□□□ -0.01
RUNX3-202ENST00000338888 DAZ1Q9NQZ3 744 aaKnown RBP14.97□□□□□ -0.01
RUNX3-202ENST00000338888 IGSF10Q6WRI0 2623 aa14.97□□□□□ -0.01
RUNX3-202ENST00000338888 IGHV3-73A0A0B4J1V6 119 aa14.97□□□□□ -0.01
RUNX3-202ENST00000338888 FAM236AA0A1B0GUQ0 79 aa14.96□□□□□ -0.01
RUNX3-202ENST00000338888 FAM236BA0A1B0GV22 79 aa14.96□□□□□ -0.01
RUNX3-202ENST00000338888 TMEM101Q96IK0 257 aa14.96□□□□□ -0.01
RUNX3-202ENST00000338888 A0A1W2PPR1 153 aa14.96□□□□□ -0.01
RUNX3-202ENST00000338888 DCANP1Q8TF63 244 aa14.96□□□□□ -0.01
RUNX3-202ENST00000338888 VSIG2Q96IQ7 327 aa14.96□□□□□ -0.01
RUNX3-202ENST00000338888 LY6EQ16553 131 aa14.96□□□□□ -0.02
RUNX3-202ENST00000338888 BRD3OSQ6XYD6 125 aa14.96□□□□□ -0.02
RUNX3-202ENST00000338888 USMG5Q96IX5 58 aa14.95□□□□□ -0.02
RUNX3-202ENST00000338888 DUX5Q96PT3 197 aa14.95□□□□□ -0.02
RUNX3-202ENST00000338888 IGHV1OR15-1A0A075B7D0 117 aa14.94□□□□□ -0.02
RUNX3-202ENST00000338888 C19orf84I3L1E1 186 aa14.94□□□□□ -0.02
RUNX3-202ENST00000338888 SPINK13Q1W4C9 94 aa14.94□□□□□ -0.02
RUNX3-202ENST00000338888 PYGO1Q9Y3Y4 419 aa14.94□□□□□ -0.02
RUNX3-202ENST00000338888 TNFRSF18Q9Y5U5 241 aa14.94□□□□□ -0.02
RUNX3-202ENST00000338888 CELSR1Q9NYQ6 3014 aa14.94□□□□□ -0.02
RUNX3-202ENST00000338888 PROK1P58294 105 aa14.94□□□□□ -0.02
RUNX3-202ENST00000338888 TMEM126AQ9H061 195 aa14.93□□□□□ -0.02
RUNX3-202ENST00000338888 LMO4P61968 165 aa14.93□□□□□ -0.02
RUNX3-202ENST00000338888 BPESC1Q9GZL8 116 aa14.93□□□□□ -0.02
RUNX3-202ENST00000338888 YAE1D1Q9NRH1 226 aa14.93□□□□□ -0.02
RUNX3-202ENST00000338888 ZFYVE26Q68DK2 2539 aa14.92□□□□□ -0.02
RUNX3-202ENST00000338888 PPDPFQ9H3Y8 114 aa14.92□□□□□ -0.02
RUNX3-202ENST00000338888 CITED2Q99967 270 aaPredicted RBP14.91□□□□□ -0.02
RUNX3-202ENST00000338888 VPREB3Q9UKI3 123 aa14.91□□□□□ -0.02
RUNX3-202ENST00000338888 HTN1P15515 57 aa14.9□□□□□ -0.02
RUNX3-202ENST00000338888 SMCR5Q8TEV8 140 aa14.9□□□□□ -0.02
RUNX3-202ENST00000338888 Q9UF83 564 aa14.9□□□□□ -0.02
RUNX3-202ENST00000338888 TINCRA0A1B0GVN0 87 aa14.89□□□□□ -0.03
RUNX3-202ENST00000338888 BLCAPP62952 87 aa14.89□□□□□ -0.03
RUNX3-202ENST00000338888 SORL1Q92673 2214 aa14.89□□□□□ -0.03
RUNX3-202ENST00000338888 FLNCQ14315 2725 aa14.89□□□□□ -0.03
RUNX3-202ENST00000338888 A0A0U1RRA0 63 aa14.88□□□□□ -0.03
RUNX3-202ENST00000338888 IGHG2P01859 326 aa14.88□□□□□ -0.03
RUNX3-202ENST00000338888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.87□□□□□ -0.03
RUNX3-202ENST00000338888 IGKV2-29A2NJV5 120 aaPredicted RBP14.87□□□□□ -0.03
RUNX3-202ENST00000338888 ACYP1P07311 99 aa14.87□□□□□ -0.03
RUNX3-202ENST00000338888 KNCNA6PVL3 124 aa14.86□□□□□ -0.03
RUNX3-202ENST00000338888 C9orf153Q5TBE3 101 aa14.86□□□□□ -0.03
RUNX3-202ENST00000338888 IMUPQ9GZP8 106 aa14.86□□□□□ -0.03
RUNX3-202ENST00000338888 USP24Q9UPU5 2620 aa14.86□□□□□ -0.03
RUNX3-202ENST00000338888 H3BUA1 57 aa14.86□□□□□ -0.03
RUNX3-202ENST00000338888 CDKN2A-AS1Q9UH64 79 aa14.85□□□□□ -0.03
RUNX3-202ENST00000338888 LINC00694P0DN24 101 aa14.85□□□□□ -0.03
RUNX3-202ENST00000338888 ZNF625Q96I27 306 aaPredicted RBP14.85□□□□□ -0.03
RUNX3-202ENST00000338888 UBE2D4Q9Y2X8 147 aa14.85□□□□□ -0.03
RUNX3-202ENST00000338888 TMEM95Q3KNT9 176 aa14.84□□□□□ -0.03
RUNX3-202ENST00000338888 TIMM17BO60830 172 aa14.84□□□□□ -0.03
RUNX3-202ENST00000338888 CHCHD7Q9BUK0 85 aa14.84□□□□□ -0.03
RUNX3-202ENST00000338888 K7EMT4 169 aa14.83□□□□□ -0.03
RUNX3-202ENST00000338888 SNRPD3P62318 126 aaKnown RBP14.83□□□□□ -0.03
RUNX3-202ENST00000338888 DOPEY2Q9Y3R5 2298 aa14.83□□□□□ -0.03
RUNX3-202ENST00000338888 MYO18BQ8IUG5 2567 aa14.83□□□□□ -0.04
RUNX3-202ENST00000338888 H3BUX3 64 aa14.83□□□□□ -0.04
RUNX3-202ENST00000338888 LINC00643Q86TS7 51 aa14.83□□□□□ -0.04
RUNX3-202ENST00000338888 C3orf22Q8N5N4 141 aa14.83□□□□□ -0.04
RUNX3-202ENST00000338888 COX7A2LO14548 114 aa14.82□□□□□ -0.04
RUNX3-202ENST00000338888 DAZ2Q13117 558 aaKnown RBP14.82□□□□□ -0.04
RUNX3-202ENST00000338888 DAZ4Q86SG3 579 aaKnown RBP14.82□□□□□ -0.04
RUNX3-202ENST00000338888 Q8N2B8 174 aa14.82□□□□□ -0.04
RUNX3-202ENST00000338888 LINC00308Q8TCZ7 52 aa14.82□□□□□ -0.04
RUNX3-202ENST00000338888 DAZ3Q9NR90 486 aaKnown RBP14.82□□□□□ -0.04
RUNX3-202ENST00000338888 PRB1P04280 392 aa14.82□□□□□ -0.04
RUNX3-202ENST00000338888 PRM2P04554 102 aa14.82□□□□□ -0.04
RUNX3-202ENST00000338888 IGHV3-38A0A0C4DH36 116 aa14.81□□□□□ -0.04
RUNX3-202ENST00000338888 CIRBPQ14011 172 aaKnown RBP14.81□□□□□ -0.04
RUNX3-202ENST00000338888 LINC00467Q9BRT7 94 aa14.81□□□□□ -0.04
RUNX3-202ENST00000338888 IGLV1-40P01703 118 aa14.81□□□□□ -0.04
RUNX3-202ENST00000338888 Q6ZSN1 163 aa14.81□□□□□ -0.04
RUNX3-202ENST00000338888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.81□□□□□ -0.04
RUNX3-202ENST00000338888 USP9XQ93008 2570 aaPredicted RBP14.81□□□□□ -0.04
RUNX3-202ENST00000338888 UTP20O75691 2785 aaKnown RBP14.8□□□□□ -0.04
RUNX3-202ENST00000338888 NDUFA1O15239 70 aa14.8□□□□□ -0.04
RUNX3-202ENST00000338888 NDUFA7O95182 113 aa14.8□□□□□ -0.04
RUNX3-202ENST00000338888 RBMY1A1P0DJD3 496 aaKnown RBP14.79□□□□□ -0.04
RUNX3-202ENST00000338888 RBMY1CP0DJD4 496 aa14.79□□□□□ -0.04
RUNX3-202ENST00000338888 RBMY1FQ15415 496 aaKnown RBP14.79□□□□□ -0.04
RUNX3-202ENST00000338888 Q9H8V8 135 aa14.79□□□□□ -0.04
RUNX3-202ENST00000338888 VPS13CQ709C8 3753 aa14.79□□□□□ -0.04
RUNX3-202ENST00000338888 IGHV4-38-2P0DP08 117 aa14.79□□□□□ -0.04
RUNX3-202ENST00000338888 KLK5Q9Y337 293 aaPredicted RBP14.79□□□□□ -0.04
RUNX3-202ENST00000338888 K7EQG2 157 aa14.79□□□□□ -0.04
RUNX3-202ENST00000338888 BAALC-AS2P0C853 105 aa14.79□□□□□ -0.04
RUNX3-202ENST00000338888 UQCRQO14949 82 aa14.78□□□□□ -0.04
RUNX3-202ENST00000338888 MAP1AP78559 2803 aaPredicted RBP14.78□□□□□ -0.04
RUNX3-202ENST00000338888 SPG11Q96JI7 2443 aa14.78□□□□□ -0.04
RUNX3-202ENST00000338888 LOC107984640A0A0U1RRK4 108 aa14.78□□□□□ -0.04
RUNX3-202ENST00000338888 COX6A2Q02221 97 aa14.78□□□□□ -0.04
RUNX3-202ENST00000338888 HERVK_113P63121 156 aa14.77□□□□□ -0.04
RUNX3-202ENST00000338888 SOSTDC1Q6X4U4 206 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms