RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PSMB8P28062 276 aa12.28□□□□□ -0.44
SSH1-201ENST00000326470 C2orf82Q6UX34 121 aa12.27□□□□□ -0.44
SSH1-201ENST00000326470 RNF152Q8N8N0 203 aa12.27□□□□□ -0.44
SSH1-201ENST00000326470 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.44
SSH1-201ENST00000326470 MIAQ16674 131 aa12.27□□□□□ -0.45
SSH1-201ENST00000326470 H7C423 109 aa12.26□□□□□ -0.45
SSH1-201ENST00000326470 COX6CP09669 75 aa12.26□□□□□ -0.45
SSH1-201ENST00000326470 VSIG2Q96IQ7 327 aa12.26□□□□□ -0.45
SSH1-201ENST00000326470 H3BT86 120 aa12.26□□□□□ -0.45
SSH1-201ENST00000326470 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
SSH1-201ENST00000326470 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
SSH1-201ENST00000326470 TINCRA0A1B0GVN0 87 aa12.25□□□□□ -0.45
SSH1-201ENST00000326470 IFITM1P13164 125 aa12.25□□□□□ -0.45
SSH1-201ENST00000326470 TTC32Q5I0X7 151 aa12.25□□□□□ -0.45
SSH1-201ENST00000326470 SS18L2Q9UHA2 77 aa12.25□□□□□ -0.45
SSH1-201ENST00000326470 CRYBG3Q68DQ2 2970 aa12.25□□□□□ -0.45
SSH1-201ENST00000326470 PRRC2AP48634 2157 aaKnown RBP12.25□□□□□ -0.45
SSH1-201ENST00000326470 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
SSH1-201ENST00000326470 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
SSH1-201ENST00000326470 C19orf84I3L1E1 186 aa12.24□□□□□ -0.45
SSH1-201ENST00000326470 B5MCH6 92 aa12.23□□□□□ -0.45
SSH1-201ENST00000326470 PROK1P58294 105 aa12.23□□□□□ -0.45
SSH1-201ENST00000326470 RNASE13Q5GAN3 156 aaKnown RBP12.23□□□□□ -0.45
SSH1-201ENST00000326470 C10orf105Q8TEF2 133 aa12.23□□□□□ -0.45
SSH1-201ENST00000326470 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
SSH1-201ENST00000326470 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
SSH1-201ENST00000326470 LST1O00453 97 aa12.22□□□□□ -0.45
SSH1-201ENST00000326470 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
SSH1-201ENST00000326470 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
SSH1-201ENST00000326470 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
SSH1-201ENST00000326470 YAE1D1Q9NRH1 226 aa12.22□□□□□ -0.45
SSH1-201ENST00000326470 SPANXA1Q9NS26 97 aa12.22□□□□□ -0.45
SSH1-201ENST00000326470 CENPEQ02224 2701 aa12.22□□□□□ -0.45
SSH1-201ENST00000326470 CELSR1Q9NYQ6 3014 aa12.22□□□□□ -0.45
SSH1-201ENST00000326470 GAGE12JA6NER3 117 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 A8MZ25 164 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 GAGE7O76087 117 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 GAGE12FP0CL80 117 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 GAGE12GP0CL81 117 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 GAGE12IP0CL82 117 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 GAGE4Q13068 117 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 C10orf99Q6UWK7 81 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 Q6ZSV7 163 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 CHCHD7Q9BUK0 85 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 UBE2D4Q9Y2X8 147 aa12.21□□□□□ -0.45
SSH1-201ENST00000326470 MAP1AP78559 2803 aaPredicted RBP12.21□□□□□ -0.45
SSH1-201ENST00000326470 TIMM17BO60830 172 aa12.21□□□□□ -0.46
SSH1-201ENST00000326470 NPC2P61916 151 aa12.21□□□□□ -0.46
SSH1-201ENST00000326470 MRPL23Q16540 153 aaKnown RBP12.21□□□□□ -0.46
SSH1-201ENST00000326470 CLEC2BQ92478 149 aa12.21□□□□□ -0.46
SSH1-201ENST00000326470 DOPEY2Q9Y3R5 2298 aa12.21□□□□□ -0.46
SSH1-201ENST00000326470 MSMBP08118 114 aa12.2□□□□□ -0.46
SSH1-201ENST00000326470 SYNJ2BPP57105 145 aa12.2□□□□□ -0.46
SSH1-201ENST00000326470 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
SSH1-201ENST00000326470 LRRK2Q5S007 2527 aa12.2□□□□□ -0.46
SSH1-201ENST00000326470 FAM240AA0A1B0GVK7 77 aa12.19□□□□□ -0.46
SSH1-201ENST00000326470 TMEM89A2RUT3 159 aa12.19□□□□□ -0.46
SSH1-201ENST00000326470 HTN1P15515 57 aa12.19□□□□□ -0.46
SSH1-201ENST00000326470 PRB1P04280 392 aa12.19□□□□□ -0.46
SSH1-201ENST00000326470 Q9UF83 564 aa12.19□□□□□ -0.46
SSH1-201ENST00000326470 CCDC179H3BU77 68 aa12.18□□□□□ -0.46
SSH1-201ENST00000326470 BBC3Q96PG8 261 aaPredicted RBP12.18□□□□□ -0.46
SSH1-201ENST00000326470 AVPP01185 164 aa12.18□□□□□ -0.46
SSH1-201ENST00000326470 KNCNA6PVL3 124 aa12.17□□□□□ -0.46
SSH1-201ENST00000326470 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.17□□□□□ -0.46
SSH1-201ENST00000326470 IGHV4-30-2A0A087WSY4 118 aa12.17□□□□□ -0.46
SSH1-201ENST00000326470 IGKV2-29A2NJV5 120 aaPredicted RBP12.17□□□□□ -0.46
SSH1-201ENST00000326470 PIK3CD-AS1Q5SR53 167 aa12.17□□□□□ -0.46
SSH1-201ENST00000326470 Q6ZSN1 163 aa12.17□□□□□ -0.46
SSH1-201ENST00000326470 SORL1Q92673 2214 aa12.17□□□□□ -0.46
SSH1-201ENST00000326470 CCL19Q99731 98 aa12.16□□□□□ -0.46
SSH1-201ENST00000326470 VPS13CQ709C8 3753 aa12.16□□□□□ -0.46
SSH1-201ENST00000326470 DUX3Q96PT4 197 aa12.16□□□□□ -0.46
SSH1-201ENST00000326470 LINC00467Q9BRT7 94 aa12.16□□□□□ -0.46
SSH1-201ENST00000326470 FAM208BQ5VWN6 2430 aa12.16□□□□□ -0.46
SSH1-201ENST00000326470 NDUFA1O15239 70 aa12.15□□□□□ -0.46
SSH1-201ENST00000326470 DUX5Q96PT3 197 aa12.15□□□□□ -0.46
SSH1-201ENST00000326470 CDKN2A-AS1Q9UH64 79 aa12.15□□□□□ -0.46
SSH1-201ENST00000326470 CSMD2Q7Z408 3487 aa12.15□□□□□ -0.47
SSH1-201ENST00000326470 IGHV4-59P01825 116 aa12.15□□□□□ -0.47
SSH1-201ENST00000326470 TIRAPP58753 221 aa12.15□□□□□ -0.47
SSH1-201ENST00000326470 DAND5Q8N907 189 aa12.15□□□□□ -0.47
SSH1-201ENST00000326470 IGLV5-45A0A087WSX0 123 aa12.14□□□□□ -0.47
SSH1-201ENST00000326470 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.14□□□□□ -0.474e-6■■■■□ 23.4
SSH1-201ENST00000326470 A8MTW9 85 aa12.13□□□□□ -0.47
SSH1-201ENST00000326470 CITED2Q99967 270 aaPredicted RBP12.13□□□□□ -0.47
SSH1-201ENST00000326470 PRM2P04554 102 aa12.13□□□□□ -0.47
SSH1-201ENST00000326470 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
SSH1-201ENST00000326470 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
SSH1-201ENST00000326470 DNAJC30Q96LL9 226 aa12.13□□□□□ -0.47
SSH1-201ENST00000326470 ATP5J2P56134 94 aa12.12□□□□□ -0.47
SSH1-201ENST00000326470 ZNF415Q09FC8 603 aa12.12□□□□□ -0.47
SSH1-201ENST00000326470 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
SSH1-201ENST00000326470 DOPEY1Q5JWR5 2465 aa12.12□□□□□ -0.47
SSH1-201ENST00000326470 NACAE9PAV3 2078 aa12.12□□□□□ -0.47
SSH1-201ENST00000326470 DEFB131AP59861 70 aa12.12□□□□□ -0.47
SSH1-201ENST00000326470 DEFB112Q30KQ8 113 aa12.12□□□□□ -0.47
SSH1-201ENST00000326470 SPG11Q96JI7 2443 aa12.12□□□□□ -0.47
SSH1-201ENST00000326470 B4DSR2 109 aa12.11□□□□□ -0.47
SSH1-201ENST00000326470 IGHV3-53P01767 116 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms