RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 KIR2DL4Q99706 377 aa16.16■□□□□ 0.18
NHLH1-201ENST00000302101 IGLV4-69A0A075B6H9 119 aa16.15■□□□□ 0.18
NHLH1-201ENST00000302101 POLR2KP53803 58 aaKnown RBP16.15■□□□□ 0.18
NHLH1-201ENST00000302101 IGHV1OR15-1A0A075B7D0 117 aa16.15■□□□□ 0.18
NHLH1-201ENST00000302101 SDHAF1A6NFY7 115 aa16.14■□□□□ 0.17
NHLH1-201ENST00000302101 IGIPA6NJ69 53 aa16.14■□□□□ 0.17
NHLH1-201ENST00000302101 RBMY1A1P0DJD3 496 aaKnown RBP16.14■□□□□ 0.17
NHLH1-201ENST00000302101 RBMY1CP0DJD4 496 aa16.14■□□□□ 0.17
NHLH1-201ENST00000302101 SRSF9Q13242 221 aaKnown RBP eCLIP16.14■□□□□ 0.17
NHLH1-201ENST00000302101 RBMY1FQ15415 496 aaKnown RBP16.14■□□□□ 0.17
NHLH1-201ENST00000302101 PGPEP1Q9NXJ5 209 aa16.14■□□□□ 0.17
NHLH1-201ENST00000302101 ATRQ13535 2644 aa16.14■□□□□ 0.17
NHLH1-201ENST00000302101 MORN3Q6PF18 240 aaPredicted RBP16.14■□□□□ 0.17
NHLH1-201ENST00000302101 Q8N1Y9 231 aa16.14■□□□□ 0.17
NHLH1-201ENST00000302101 SPANXB1Q9NS25 103 aaPredicted RBP16.14■□□□□ 0.17
NHLH1-201ENST00000302101 TEP1Q99973 2627 aaKnown RBP16.14■□□□□ 0.17
NHLH1-201ENST00000302101 SCGB1A1P11684 91 aa16.13■□□□□ 0.17
NHLH1-201ENST00000302101 RPL32P62910 135 aaKnown RBP16.13■□□□□ 0.17
NHLH1-201ENST00000302101 STHQ8IWL8 128 aa16.13■□□□□ 0.17
NHLH1-201ENST00000302101 CITED1Q99966 193 aa16.13■□□□□ 0.17
NHLH1-201ENST00000302101 VCYO14598 125 aa16.13■□□□□ 0.17
NHLH1-201ENST00000302101 PMVKQ15126 192 aa16.13■□□□□ 0.17
NHLH1-201ENST00000302101 ETDBQ3ZM63 59 aa16.13■□□□□ 0.17
NHLH1-201ENST00000302101 SH2D6Q7Z4S9 175 aa16.13■□□□□ 0.17
NHLH1-201ENST00000302101 MRPL16Q9NX20 251 aaKnown RBP16.13■□□□□ 0.17
NHLH1-201ENST00000302101 CKS1BP61024 79 aa16.12■□□□□ 0.17
NHLH1-201ENST00000302101 MDFICQ9P1T7 246 aa16.12■□□□□ 0.17
NHLH1-201ENST00000302101 IGHV3-16A0A0C4DH30 117 aa16.11■□□□□ 0.17
NHLH1-201ENST00000302101 HTN1P15515 57 aa16.11■□□□□ 0.17
NHLH1-201ENST00000302101 HERVK_113P61574 105 aa16.11■□□□□ 0.17
NHLH1-201ENST00000302101 GAGE13Q4V321 117 aa16.11■□□□□ 0.17
NHLH1-201ENST00000302101 VWFP04275 2813 aa16.11■□□□□ 0.17
NHLH1-201ENST00000302101 ZNF56Q15929 161 aa16.1■□□□□ 0.17
NHLH1-201ENST00000302101 BEAN1Q3B7T3 259 aa16.1■□□□□ 0.17
NHLH1-201ENST00000302101 PAPPA-AS1Q5QFB9 102 aa16.1■□□□□ 0.17
NHLH1-201ENST00000302101 CMC4P56277 68 aaPredicted RBP16.09■□□□□ 0.17
NHLH1-201ENST00000302101 TMEM170BQ5T4T1 132 aa16.09■□□□□ 0.17
NHLH1-201ENST00000302101 LINC01549A6NIU2 74 aa16.09■□□□□ 0.17
NHLH1-201ENST00000302101 SFTA2Q6UW10 78 aa16.09■□□□□ 0.17
NHLH1-201ENST00000302101 SPATA3Q8NHX4 192 aa16.09■□□□□ 0.17
NHLH1-201ENST00000302101 TMEM141Q96I45 108 aa16.09■□□□□ 0.17
NHLH1-201ENST00000302101 TIMM17AQ99595 171 aa16.09■□□□□ 0.17
NHLH1-201ENST00000302101 TRPT1Q86TN4 253 aaKnown RBP16.08■□□□□ 0.17
NHLH1-201ENST00000302101 WFDC10AQ9H1F0 79 aa16.08■□□□□ 0.17
NHLH1-201ENST00000302101 TRBV27A0A0K0K1C4 114 aa16.08■□□□□ 0.16
NHLH1-201ENST00000302101 C9orf85Q96MD7 179 aa16.08■□□□□ 0.16
NHLH1-201ENST00000302101 XCL2Q9UBD3 114 aa16.07■□□□□ 0.16
NHLH1-201ENST00000302101 PRO0461Q9UI25 63 aa16.07■□□□□ 0.16
NHLH1-201ENST00000302101 APOMO95445 188 aa16.07■□□□□ 0.16
NHLH1-201ENST00000302101 TSPEAR-AS2P59090 65 aa16.07■□□□□ 0.16
NHLH1-201ENST00000302101 SIGMAR1Q99720 223 aa16.07■□□□□ 0.16
NHLH1-201ENST00000302101 PRM2P04554 102 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 UBE2D1P51668 147 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 ZNRF2Q8NHG8 242 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 TRGV11A0A075B6L2 103 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 A0A0J9YY99 117 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 J3QR89 54 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 SYT8Q8NBV8 401 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 C19orf73Q9NVV2 129 aa16.06■□□□□ 0.16
NHLH1-201ENST00000302101 INSP01308 110 aa16.05■□□□□ 0.16
NHLH1-201ENST00000302101 FAM110AQ9BQ89 295 aa16.05■□□□□ 0.16
NHLH1-201ENST00000302101 LOC107984156A0A0G2JMH3 177 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 TRBV6-5A0A0K0K1A5 114 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 TSPAN13O95857 204 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 ZNF876PQ49A33 203 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 ARL17AQ8IVW1 177 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 LINC01587Q99440 93 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 M0QY20 66 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 OPRPNQ99935 248 aaPredicted RBP16.04■□□□□ 0.16
NHLH1-201ENST00000302101 NOTCH3Q9UM47 2321 aa16.04■□□□□ 0.16
NHLH1-201ENST00000302101 INSL3P51460 131 aa16.02■□□□□ 0.15
NHLH1-201ENST00000302101 KRTAP24-1Q3LI83 254 aa16.02■□□□□ 0.15
NHLH1-201ENST00000302101 C9orf66Q5T8R8 295 aa16.01■□□□□ 0.15
NHLH1-201ENST00000302101 GAGE12HA6NDE8 117 aa16.01■□□□□ 0.15
NHLH1-201ENST00000302101 PSMB2P49721 201 aa16■□□□□ 0.15
NHLH1-201ENST00000302101 IGHV3OR16-12A0A075B7B8 117 aa15.99■□□□□ 0.15
NHLH1-201ENST00000302101 J3QQQ9 107 aa15.99■□□□□ 0.15
NHLH1-201ENST00000302101 RPL35AP18077 110 aaKnown RBP15.99■□□□□ 0.15
NHLH1-201ENST00000302101 LGALS3P17931 250 aaKnown RBP15.99■□□□□ 0.15
NHLH1-201ENST00000302101 IGHV3-30P01768 117 aa15.98■□□□□ 0.15
NHLH1-201ENST00000302101 IGHV3-30-5P0DP03 117 aa15.98■□□□□ 0.15
NHLH1-201ENST00000302101 C1orf158Q8N1D5 194 aa15.98■□□□□ 0.15
NHLH1-201ENST00000302101 RHOHQ15669 191 aa15.98■□□□□ 0.15
NHLH1-201ENST00000302101 SLC25A29Q8N8R3 303 aa15.98■□□□□ 0.15
NHLH1-201ENST00000302101 P0DMU3 169 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 FAM231AP0DMU4 169 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 FAM231CP0DMU5 169 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 CFAP126Q5VTH2 177 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 AMELXQ99217 191 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 HERV-K104P63124 156 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 LINC00467Q9BRT7 94 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 GEMIN7Q9H840 131 aaKnown RBP15.97■□□□□ 0.15
NHLH1-201ENST00000302101 SS18L2Q9UHA2 77 aa15.97■□□□□ 0.15
NHLH1-201ENST00000302101 IGHV3-64A0A075B6Q5 118 aa15.96■□□□□ 0.15
NHLH1-201ENST00000302101 TRRAPQ9Y4A5 3859 aa15.96■□□□□ 0.15
NHLH1-201ENST00000302101 SMCPP49901 116 aaPredicted RBP15.96■□□□□ 0.15
NHLH1-201ENST00000302101 UBE2D3P61077 147 aa15.96■□□□□ 0.15
NHLH1-201ENST00000302101 UBE2D2P62837 147 aa15.96■□□□□ 0.15
NHLH1-201ENST00000302101 ZNF415Q09FC8 603 aa15.96■□□□□ 0.15
NHLH1-201ENST00000302101 NFE4Q86UQ8 179 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms