RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LINC01545Q5VT33 79 aa13.29□□□□□ -0.28
CDC42EP3-201ENST00000295324 DEFB105AQ8NG35 78 aa13.29□□□□□ -0.28
CDC42EP3-201ENST00000295324 TOMM6Q96B49 74 aa13.29□□□□□ -0.28
CDC42EP3-201ENST00000295324 B5MCH6 92 aa13.29□□□□□ -0.28
CDC42EP3-201ENST00000295324 IGLV1-40P01703 118 aa13.29□□□□□ -0.28
CDC42EP3-201ENST00000295324 SND1-IT1Q9HBX3 110 aa13.29□□□□□ -0.28
CDC42EP3-201ENST00000295324 SS18L2Q9UHA2 77 aa13.29□□□□□ -0.28
CDC42EP3-201ENST00000295324 TLN2Q9Y4G6 2542 aa13.28□□□□□ -0.28
CDC42EP3-201ENST00000295324 DOPEY1Q5JWR5 2465 aa13.28□□□□□ -0.28
CDC42EP3-201ENST00000295324 WDR87Q6ZQQ6 2873 aa13.28□□□□□ -0.28
CDC42EP3-201ENST00000295324 BAALC-AS2P0C853 105 aa13.28□□□□□ -0.28
CDC42EP3-201ENST00000295324 ORMDL1Q9P0S3 153 aa13.28□□□□□ -0.28
CDC42EP3-201ENST00000295324 TP53TG3Q9ULZ0 132 aa13.28□□□□□ -0.28
CDC42EP3-201ENST00000295324 USP9XQ93008 2570 aaPredicted RBP13.28□□□□□ -0.28
CDC42EP3-201ENST00000295324 Q6ZVH6 145 aa13.27□□□□□ -0.28
CDC42EP3-201ENST00000295324 C20orf173Q96LM9 149 aa13.27□□□□□ -0.28
CDC42EP3-201ENST00000295324 UBE2AP49459 152 aa13.27□□□□□ -0.28
CDC42EP3-201ENST00000295324 COA6Q5JTJ3 125 aaKnown RBP13.27□□□□□ -0.29
CDC42EP3-201ENST00000295324 C2CD3Q4AC94 2353 aa13.26□□□□□ -0.29
CDC42EP3-201ENST00000295324 ZNF295-AS1Q8N0V1 137 aa13.26□□□□□ -0.29
CDC42EP3-201ENST00000295324 ZNF462Q96JM2 2506 aa13.26□□□□□ -0.29
CDC42EP3-201ENST00000295324 ACYP1P07311 99 aa13.25□□□□□ -0.29
CDC42EP3-201ENST00000295324 BAALCQ8WXS3 180 aa13.25□□□□□ -0.29
CDC42EP3-201ENST00000295324 TRAV10A0A0B4J240 114 aa13.25□□□□□ -0.29
CDC42EP3-201ENST00000295324 Q6ZS46 218 aa13.25□□□□□ -0.29
CDC42EP3-201ENST00000295324 IGHV4-4A0A075B6R2 117 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 KIR2DL5BA0A0G2JN68 375 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 KIR2DL5BA0A0G2JPC4 375 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 KIR2DL5AQ8N109 375 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 KIR2DL5BQ8NHK3 375 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 HIST2H2BDQ6DRA6 164 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 A0A1W2PPR1 153 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 PCP2Q8IVA1 136 aa13.24□□□□□ -0.29
CDC42EP3-201ENST00000295324 FASNP49327 2511 aaKnown RBP13.23□□□□□ -0.29
CDC42EP3-201ENST00000295324 PLXNB1O43157 2135 aa13.23□□□□□ -0.29
CDC42EP3-201ENST00000295324 CRYGDP07320 174 aa13.23□□□□□ -0.29
CDC42EP3-201ENST00000295324 IGLC6P0CF74 106 aa13.22□□□□□ -0.29
CDC42EP3-201ENST00000295324 BBC3Q96PG8 261 aaPredicted RBP13.22□□□□□ -0.29
CDC42EP3-201ENST00000295324 H0YGX0 51 aa13.22□□□□□ -0.29
CDC42EP3-201ENST00000295324 CDPF1Q6NVV7 123 aa13.21□□□□□ -0.29
CDC42EP3-201ENST00000295324 MLST8Q9BVC4 326 aa13.21□□□□□ -0.29
CDC42EP3-201ENST00000295324 REG3AQ06141 175 aa13.21□□□□□ -0.29
CDC42EP3-201ENST00000295324 C4orf48Q5BLP8 95 aa13.21□□□□□ -0.29
CDC42EP3-201ENST00000295324 C18orf65Q6ZTR6 163 aa13.21□□□□□ -0.29
CDC42EP3-201ENST00000295324 ZFAND2AQ8N6M9 145 aa13.21□□□□□ -0.29
CDC42EP3-201ENST00000295324 LRRK2Q5S007 2527 aa13.21□□□□□ -0.3
CDC42EP3-201ENST00000295324 LINC00173Q6ZV60 143 aa13.2□□□□□ -0.3
CDC42EP3-201ENST00000295324 LINC00269Q8N2A0 174 aa13.2□□□□□ -0.3
CDC42EP3-201ENST00000295324 P0DMU3 169 aa13.2□□□□□ -0.3
CDC42EP3-201ENST00000295324 FAM231AP0DMU4 169 aa13.2□□□□□ -0.3
CDC42EP3-201ENST00000295324 FAM231CP0DMU5 169 aa13.2□□□□□ -0.3
CDC42EP3-201ENST00000295324 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
CDC42EP3-201ENST00000295324 OPRPNQ99935 248 aaPredicted RBP13.2□□□□□ -0.3
CDC42EP3-201ENST00000295324 C11orf86A6NJI1 115 aa13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 IGHV4-28A0A0C4DH34 117 aa13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 USP9YO00507 2555 aaPredicted RBP13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 ARHGAP32A7KAX9 2087 aa13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 IGLV2-8P01709 118 aa13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 GDF5OSQ5U4N7 250 aa13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 LINC00322Q6ZN03 302 aaPredicted RBP13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 NDUFC2O95298 119 aa13.19□□□□□ -0.3
CDC42EP3-201ENST00000295324 H7C423 109 aa13.18□□□□□ -0.3
CDC42EP3-201ENST00000295324 FUSP35637 526 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDC42EP3-201ENST00000295324 OXLD1Q5BKU9 147 aa13.18□□□□□ -0.3
CDC42EP3-201ENST00000295324 Q6ZUT4 128 aa13.18□□□□□ -0.3
CDC42EP3-201ENST00000295324 CHKB-CPT1BH3BT56 60 aa13.18□□□□□ -0.3
CDC42EP3-201ENST00000295324 MUSTN1Q8IVN3 82 aa13.18□□□□□ -0.3
CDC42EP3-201ENST00000295324 IGHV1-58A0A0C4DH39 117 aa13.17□□□□□ -0.3
CDC42EP3-201ENST00000295324 IGKV2-24A0A0C4DH68 120 aa13.17□□□□□ -0.3
CDC42EP3-201ENST00000295324 SMIM20Q8N5G0 67 aa13.17□□□□□ -0.3
CDC42EP3-201ENST00000295324 WFDC9Q8NEX5 89 aa13.17□□□□□ -0.3
CDC42EP3-201ENST00000295324 HIGD2BQ4VC39 106 aa13.17□□□□□ -0.3
CDC42EP3-201ENST00000295324 E9PLD3 99 aa13.17□□□□□ -0.3
CDC42EP3-201ENST00000295324 ANKRD39Q53RE8 183 aa13.16□□□□□ -0.3
CDC42EP3-201ENST00000295324 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
CDC42EP3-201ENST00000295324 CFAP126Q5VTH2 177 aa13.16□□□□□ -0.3
CDC42EP3-201ENST00000295324 KIAA1549Q9HCM3 1950 aa13.16□□□□□ -0.3
CDC42EP3-201ENST00000295324 CEMP1Q6PRD7 247 aaPredicted RBP13.15□□□□□ -0.3
CDC42EP3-201ENST00000295324 A0A0B4J2C4 111 aa13.15□□□□□ -0.3
CDC42EP3-201ENST00000295324 ATOX1O00244 68 aa13.15□□□□□ -0.3
CDC42EP3-201ENST00000295324 A4D1N5 150 aa13.15□□□□□ -0.3
CDC42EP3-201ENST00000295324 NCR3O14931 201 aa13.15□□□□□ -0.3
CDC42EP3-201ENST00000295324 PRB2P02812 416 aaPredicted RBP13.15□□□□□ -0.3
CDC42EP3-201ENST00000295324 NUPR1O60356 82 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 A0A1B0GX51 115 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 SRCAPQ6ZRS2 3230 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 WFDC10AQ9H1F0 79 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 UFSP1Q6NVU6 142 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 MIR7-3HGQ8N6C7 128 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 IGKV3D-7A0A0C4DH55 119 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 H3BQ85 93 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 NEXN-AS1Q8NBZ9 246 aa13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 CHCHD10Q8WYQ3 142 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP3-201ENST00000295324 TRBV6-8A0A0A6YYG3 113 aa13.13□□□□□ -0.31
CDC42EP3-201ENST00000295324 MP68P56378 58 aa13.13□□□□□ -0.31
CDC42EP3-201ENST00000295324 DAND5Q8N907 189 aa13.13□□□□□ -0.31
CDC42EP3-201ENST00000295324 FN1P02751 2386 aaKnown RBP13.13□□□□□ -0.31
CDC42EP3-201ENST00000295324 FRMD6-AS1P0C7T7 363 aa13.12□□□□□ -0.31
CDC42EP3-201ENST00000295324 ODF1Q14990 250 aa13.12□□□□□ -0.31
CDC42EP3-201ENST00000295324 FAM236AA0A1B0GUQ0 79 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 171.8 ms