RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 ITLN2Q8WWU7 325 aaPredicted RBP11.9□□□□□ -0.51
SLC6A8-201ENST00000253122 SIRPDQ9H106 197 aa11.9□□□□□ -0.51
SLC6A8-201ENST00000253122 C11orf44Q8N8P7 122 aa11.89□□□□□ -0.51
SLC6A8-201ENST00000253122 TMEM223A0PJW6 202 aa11.89□□□□□ -0.51
SLC6A8-201ENST00000253122 MED14OSP0DP75 135 aa11.89□□□□□ -0.51
SLC6A8-201ENST00000253122 COX6B1P14854 86 aa11.89□□□□□ -0.51
SLC6A8-201ENST00000253122 ATP5J2P56134 94 aa11.89□□□□□ -0.51
SLC6A8-201ENST00000253122 DOPEY1Q5JWR5 2465 aa11.89□□□□□ -0.51
SLC6A8-201ENST00000253122 TSHBP01222 138 aa11.89□□□□□ -0.51
SLC6A8-201ENST00000253122 Q6ZSV7 163 aa11.88□□□□□ -0.51
SLC6A8-201ENST00000253122 TMEM263Q8WUH6 116 aaKnown RBP11.88□□□□□ -0.51
SLC6A8-201ENST00000253122 COPS9Q8WXC6 57 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 UBE2L6O14933 153 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 IGHV1-69P01742 117 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 PIMREGQ9BSJ6 248 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 C11orf68Q9H3H3 251 aaKnown RBP11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 COL12A1Q99715 3063 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 IGHV3-53P01767 116 aa11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
SLC6A8-201ENST00000253122 LGALS9O00182 355 aa11.86□□□□□ -0.51
SLC6A8-201ENST00000253122 DEFB131AP59861 70 aa11.86□□□□□ -0.51
SLC6A8-201ENST00000253122 Q9H8V8 135 aa11.86□□□□□ -0.51
SLC6A8-201ENST00000253122 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
SLC6A8-201ENST00000253122 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
SLC6A8-201ENST00000253122 A0A087WW49 117 aa11.85□□□□□ -0.51
SLC6A8-201ENST00000253122 TRBV27A0A0K0K1C4 114 aa11.85□□□□□ -0.51
SLC6A8-201ENST00000253122 H3BT86 120 aa11.84□□□□□ -0.51
SLC6A8-201ENST00000253122 M0QY20 66 aa11.84□□□□□ -0.51
SLC6A8-201ENST00000253122 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
SLC6A8-201ENST00000253122 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
SLC6A8-201ENST00000253122 ZNF575Q86XF7 245 aa11.84□□□□□ -0.51
SLC6A8-201ENST00000253122 CITED1Q99966 193 aa11.83□□□□□ -0.51
SLC6A8-201ENST00000253122 BAALC-AS2P0C853 105 aa11.83□□□□□ -0.52
SLC6A8-201ENST00000253122 IGHV1-58A0A0C4DH39 117 aa11.83□□□□□ -0.52
SLC6A8-201ENST00000253122 ELANEP08246 267 aa11.83□□□□□ -0.52
SLC6A8-201ENST00000253122 PROK1P58294 105 aa11.83□□□□□ -0.52
SLC6A8-201ENST00000253122 U3KQE9 123 aa11.82□□□□□ -0.52
SLC6A8-201ENST00000253122 TRBV30A0A0K0K1B3 111 aa11.82□□□□□ -0.52
SLC6A8-201ENST00000253122 IGHV4-38-2P0DP08 117 aa11.82□□□□□ -0.52
SLC6A8-201ENST00000253122 LINC00158P58513 81 aa11.82□□□□□ -0.52
SLC6A8-201ENST00000253122 H7C423 109 aa11.81□□□□□ -0.52
SLC6A8-201ENST00000253122 EDN2P20800 178 aa11.81□□□□□ -0.52
SLC6A8-201ENST00000253122 SPANXA1Q9NS26 97 aa11.81□□□□□ -0.52
SLC6A8-201ENST00000253122 ACANP16112 2415 aa11.81□□□□□ -0.52
SLC6A8-201ENST00000253122 CRPP02741 224 aa11.8□□□□□ -0.52
SLC6A8-201ENST00000253122 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
SLC6A8-201ENST00000253122 MIAQ16674 131 aa11.8□□□□□ -0.52
SLC6A8-201ENST00000253122 TRGV1A0A0A0MS02 117 aa11.8□□□□□ -0.52
SLC6A8-201ENST00000253122 PRB1P04280 392 aa11.8□□□□□ -0.52
SLC6A8-201ENST00000253122 ZNF415Q09FC8 603 aa11.8□□□□□ -0.52
SLC6A8-201ENST00000253122 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
SLC6A8-201ENST00000253122 PRM2P04554 102 aa11.79□□□□□ -0.52
SLC6A8-201ENST00000253122 HIST1H4AP62805 103 aaKnown RBP11.79□□□□□ -0.52
SLC6A8-201ENST00000253122 CCL19Q99731 98 aa11.79□□□□□ -0.52
SLC6A8-201ENST00000253122 FASNP49327 2511 aaKnown RBP11.79□□□□□ -0.52
SLC6A8-201ENST00000253122 LRBAP50851 2863 aa11.79□□□□□ -0.52
SLC6A8-201ENST00000253122 CDKN2A-AS1Q9UH64 79 aa11.78□□□□□ -0.52
SLC6A8-201ENST00000253122 NSUN5P1Q3KNT7 163 aa11.78□□□□□ -0.52
SLC6A8-201ENST00000253122 ADAMTSL4-AS1Q5T5F5 129 aa11.78□□□□□ -0.52
SLC6A8-201ENST00000253122 HIST2H2BDQ6DRA6 164 aa11.77□□□□□ -0.52
SLC6A8-201ENST00000253122 XCL2Q9UBD3 114 aa11.77□□□□□ -0.53
SLC6A8-201ENST00000253122 A0A0J9YX75 114 aa11.77□□□□□ -0.53
SLC6A8-201ENST00000253122 LMO4P61968 165 aa11.77□□□□□ -0.53
SLC6A8-201ENST00000253122 PAX4O43316 350 aa11.76□□□□□ -0.53
SLC6A8-201ENST00000253122 MUC4Q99102 2169 aa11.76□□□□□ -0.53
SLC6A8-201ENST00000253122 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
SLC6A8-201ENST00000253122 Q9HAA7 133 aa11.76□□□□□ -0.53
SLC6A8-201ENST00000253122 KLLNB2CW77 178 aa11.76□□□□□ -0.53
SLC6A8-201ENST00000253122 SHISA2Q6UWI4 295 aa11.76□□□□□ -0.53
SLC6A8-201ENST00000253122 C19orf84I3L1E1 186 aa11.75□□□□□ -0.53
SLC6A8-201ENST00000253122 VSIG2Q96IQ7 327 aa11.75□□□□□ -0.53
SLC6A8-201ENST00000253122 INAFM2P0DMQ5 153 aa11.75□□□□□ -0.53
SLC6A8-201ENST00000253122 ODF3Q96PU9 254 aa11.75□□□□□ -0.53
SLC6A8-201ENST00000253122 KIF25-AS1Q9Y6Z4 181 aa11.75□□□□□ -0.53
SLC6A8-201ENST00000253122 IGHV4-61A0A0C4DH41 118 aa11.75□□□□□ -0.53
SLC6A8-201ENST00000253122 LINC00315P59091 139 aa11.75□□□□□ -0.53
SLC6A8-201ENST00000253122 LAMA5O15230 3695 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 IGKV3D-7A0A0C4DH55 119 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 RPL36AP83881 106 aaKnown RBP11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 TMEM61Q8N0U2 210 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 RPL36ALQ969Q0 106 aaKnown RBP11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 A0A1W2PRX2 142 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 PFN2P35080 140 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 IGHG2P01859 326 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 C11orf71Q6IPW1 123 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 POM121L12Q8N7R1 296 aa11.74□□□□□ -0.53
SLC6A8-201ENST00000253122 TRGV2A0A075B6R0 118 aa11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 LST1O00453 97 aa11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 NXPH4O95158 308 aa11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 DAZ4Q86SG3 579 aaKnown RBP11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 SBSPONQ8IVN8 264 aa11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 DAZ3Q9NR90 486 aaKnown RBP11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 TINCRA0A1B0GVN0 87 aa11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 ACYP1P07311 99 aa11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
SLC6A8-201ENST00000253122 C10orf99Q6UWK7 81 aa11.72□□□□□ -0.53
SLC6A8-201ENST00000253122 LINC00467Q9BRT7 94 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms