RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 DNAJC30Q96LL9 226 aa12.41□□□□□ -0.42
RAB35-201ENST00000229340 APRG1Q8IVJ8 170 aa12.4□□□□□ -0.42
RAB35-201ENST00000229340 IGHV1-58A0A0C4DH39 117 aa12.39□□□□□ -0.43
RAB35-201ENST00000229340 FAM104AQ969W3 186 aa12.39□□□□□ -0.43
RAB35-201ENST00000229340 RHPN1-AS1Q9BWJ2 59 aa12.39□□□□□ -0.43
RAB35-201ENST00000229340 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
RAB35-201ENST00000229340 SPANXCQ9NY87 97 aa12.39□□□□□ -0.43
RAB35-201ENST00000229340 KLLNB2CW77 178 aa12.39□□□□□ -0.43
RAB35-201ENST00000229340 PROK1P58294 105 aa12.38□□□□□ -0.43
RAB35-201ENST00000229340 HTN1P15515 57 aa12.38□□□□□ -0.43
RAB35-201ENST00000229340 CITED2Q99967 270 aaPredicted RBP12.38□□□□□ -0.43
RAB35-201ENST00000229340 Q9UF83 564 aa12.38□□□□□ -0.43
RAB35-201ENST00000229340 CUBNO60494 3623 aa12.38□□□□□ -0.43
RAB35-201ENST00000229340 VPS13CQ709C8 3753 aa12.38□□□□□ -0.43
RAB35-201ENST00000229340 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
RAB35-201ENST00000229340 IGHV3-16A0A0C4DH30 117 aa12.37□□□□□ -0.43
RAB35-201ENST00000229340 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
RAB35-201ENST00000229340 VSIG2Q96IQ7 327 aa12.37□□□□□ -0.43
RAB35-201ENST00000229340 UQCRQO14949 82 aa12.37□□□□□ -0.43
RAB35-201ENST00000229340 DAZ2Q13117 558 aaKnown RBP12.37□□□□□ -0.43
RAB35-201ENST00000229340 DAZ4Q86SG3 579 aaKnown RBP12.37□□□□□ -0.43
RAB35-201ENST00000229340 EDA2RQ9HAV5 297 aa12.37□□□□□ -0.43
RAB35-201ENST00000229340 DAZ1Q9NQZ3 744 aaKnown RBP12.37□□□□□ -0.43
RAB35-201ENST00000229340 DAZ3Q9NR90 486 aaKnown RBP12.37□□□□□ -0.43
RAB35-201ENST00000229340 C5orf56Q8N8D9 126 aa12.36□□□□□ -0.43
RAB35-201ENST00000229340 DCANP1Q8TF63 244 aa12.36□□□□□ -0.43
RAB35-201ENST00000229340 C2CD3Q4AC94 2353 aa12.36□□□□□ -0.43
RAB35-201ENST00000229340 MRPS36P82909 103 aaKnown RBP12.36□□□□□ -0.43
RAB35-201ENST00000229340 Q8NA96 180 aa12.36□□□□□ -0.43
RAB35-201ENST00000229340 SIRPDQ9H106 197 aa12.36□□□□□ -0.43
RAB35-201ENST00000229340 Q8N2B8 174 aa12.35□□□□□ -0.43
RAB35-201ENST00000229340 UBTD1Q9HAC8 227 aa12.35□□□□□ -0.43
RAB35-201ENST00000229340 ATRXP46100 2492 aa12.35□□□□□ -0.43
RAB35-201ENST00000229340 LINC00643Q86TS7 51 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 LINC00526Q96FQ7 95 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 CYSTM1Q9H1C7 97 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 NDUFA4O00483 81 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 KLK9Q2XQG4 91 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 IMUPQ9GZP8 106 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.34□□□□□ -0.43
RAB35-201ENST00000229340 IGKV2-29A2NJV5 120 aaPredicted RBP12.34□□□□□ -0.43
RAB35-201ENST00000229340 KNCNA6PVL3 124 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 C9orf85Q96MD7 179 aa12.34□□□□□ -0.43
RAB35-201ENST00000229340 hADV29S1A0JD25 119 aa12.33□□□□□ -0.44
RAB35-201ENST00000229340 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
RAB35-201ENST00000229340 NBL1P41271 181 aa12.33□□□□□ -0.44
RAB35-201ENST00000229340 NOTCH3Q9UM47 2321 aa12.32□□□□□ -0.44
RAB35-201ENST00000229340 SMIM9A6NGZ8 99 aa12.32□□□□□ -0.44
RAB35-201ENST00000229340 PRM2P04554 102 aa12.32□□□□□ -0.44
RAB35-201ENST00000229340 ACYP1P07311 99 aa12.32□□□□□ -0.44
RAB35-201ENST00000229340 IGHG2P01859 326 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 BAALC-AS2P0C853 105 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 CDKN2A-AS1Q9UH64 79 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 FAM223BA6NKX1 122 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 J3KT08 172 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 CDSNQ15517 529 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 C5orf47Q569G3 176 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 FAM223AQ8IWN6 122 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 TRAV13-1A0A0B4J241 112 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 TIRAPP58753 221 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 LY6EQ16553 131 aa12.31□□□□□ -0.44
RAB35-201ENST00000229340 IGHV3-38A0A0C4DH36 116 aa12.3□□□□□ -0.44
RAB35-201ENST00000229340 LY6DQ14210 128 aa12.3□□□□□ -0.44
RAB35-201ENST00000229340 HOXD3P31249 432 aaPredicted RBP12.3□□□□□ -0.44
RAB35-201ENST00000229340 KLRB1Q12918 225 aa12.3□□□□□ -0.44
RAB35-201ENST00000229340 Q9HAA7 133 aa12.3□□□□□ -0.44
RAB35-201ENST00000229340 CSPG4Q6UVK1 2322 aa12.29□□□□□ -0.44
RAB35-201ENST00000229340 COX7A2LO14548 114 aa12.29□□□□□ -0.44
RAB35-201ENST00000229340 COX7CP15954 63 aa12.29□□□□□ -0.44
RAB35-201ENST00000229340 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
RAB35-201ENST00000229340 LINC00308Q8TCZ7 52 aa12.29□□□□□ -0.44
RAB35-201ENST00000229340 FAM218AQ96MZ4 157 aa12.29□□□□□ -0.44
RAB35-201ENST00000229340 CSMD2Q7Z408 3487 aa12.28□□□□□ -0.44
RAB35-201ENST00000229340 BRD3OSQ6XYD6 125 aa12.28□□□□□ -0.44
RAB35-201ENST00000229340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
RAB35-201ENST00000229340 KIR2DL5BQ8NHK3 375 aa12.28□□□□□ -0.44
RAB35-201ENST00000229340 Q9H8V8 135 aa12.28□□□□□ -0.44
RAB35-201ENST00000229340 IGHV1OR15-1A0A075B7D0 117 aa12.27□□□□□ -0.44
RAB35-201ENST00000229340 C2orf48Q96LS8 159 aa12.27□□□□□ -0.44
RAB35-201ENST00000229340 SOSTDC1Q6X4U4 206 aa12.27□□□□□ -0.45
RAB35-201ENST00000229340 C22orf24Q9Y442 160 aa12.27□□□□□ -0.45
RAB35-201ENST00000229340 TINCRA0A1B0GVN0 87 aa12.27□□□□□ -0.45
RAB35-201ENST00000229340 PYGO1Q9Y3Y4 419 aa12.27□□□□□ -0.45
RAB35-201ENST00000229340 IGKV3D-7A0A0C4DH55 119 aa12.26□□□□□ -0.45
RAB35-201ENST00000229340 CCL21O00585 134 aa12.25□□□□□ -0.45
RAB35-201ENST00000229340 C19orf54Q5BKX5 351 aa12.25□□□□□ -0.45
RAB35-201ENST00000229340 C5orf38Q86SI9 138 aa12.25□□□□□ -0.45
RAB35-201ENST00000229340 LRRC75A-AS1Q8N1F1 130 aa12.25□□□□□ -0.45
RAB35-201ENST00000229340 LINC00467Q9BRT7 94 aa12.25□□□□□ -0.45
RAB35-201ENST00000229340 MOB4Q9Y3A3 225 aa12.25□□□□□ -0.45
RAB35-201ENST00000229340 COX6A2Q02221 97 aa12.25□□□□□ -0.45
RAB35-201ENST00000229340 Q6ZSN1 163 aa12.24□□□□□ -0.45
RAB35-201ENST00000229340 ABCA2Q9BZC7 2435 aa12.24□□□□□ -0.45
RAB35-201ENST00000229340 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
RAB35-201ENST00000229340 UBE2D4Q9Y2X8 147 aa12.24□□□□□ -0.45
RAB35-201ENST00000229340 A0A087WVE0 104 aa12.23□□□□□ -0.45
RAB35-201ENST00000229340 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
RAB35-201ENST00000229340 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
RAB35-201ENST00000229340 SPG11Q96JI7 2443 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms