RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Pax8Q00288 457 aa13.17□□□□□ -0.3
Clcn3-203ENSMUST00000093490 NrepQ07475 68 aa13.17□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Gm11110Q3U4K9 109 aa13.17□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Mex3bQ69Z36 601 aaKnown RBP13.17□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Cox6cQ9CPQ1 76 aa13.17□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Cited2O35740 269 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Egr1P08046 533 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Atp5g2P56383 146 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Ripply2Q2WG76 128 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Q8BTC1 67 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Fstl3Q9EQC7 256 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Arpc1aQ9R0Q6 370 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Trdv2-1A0A0G2JGB9 116 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 PpyP10601 100 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Fbln7Q501P1 440 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Vmn1r235Q8R297 328 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Myo16Q5DU14 1919 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Asphd1Q2TA57 360 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Znf329Q6GQR8 522 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Defb6Q91VD6 63 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Ighv7-4A0A0A6YXL5 121 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Rnase2O35291 155 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Klk1b27Q9JM71 263 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Cacna1aP97445 2368 aa13.16□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Ighv1-76A0A0G2JFE9 117 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 P01655 112 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Srsf6Q3TWW8 339 aaKnown RBP13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 SprnQ8BWU1 147 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Ms4a8Q99N10 290 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Prr14lE9Q7C4 1971 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Igkv6-23A0A140T8N5 115 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Gm45717A0A1B0GT68 152 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Trdv4Q5R1A3 115 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Olfr1382Q7TQT3 311 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Olfr263Q7TQT8 317 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Wbp2nlQ9D529 359 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 EppinQ9DA01 134 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Nkx2-8O70584 235 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Necap2Q9D1J1 266 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Ighv1-15A0A0A6YXA5 117 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Wdr82Q8BFQ4 313 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Hist3h2bbQ8CGP0 126 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Hist3h2baQ9D2U9 126 aa13.15□□□□□ -0.3
Clcn3-203ENSMUST00000093490 Ighv1-67A0A0G2JFN9 117 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Atp5lQ9CPQ8 103 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Pnrc2Q9CR73 140 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 2200002J24RikQ9D807 110 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Plxna3P70208 1872 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 1700015F17RikD3YUK8 150 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 P01725 110 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 NmbQ9CR53 121 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Cep295Q8BQ48 2412 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Spcs1Q9D958 161 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 AgerQ62151 402 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Higd1bQ99JY6 98 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Chd3B1AR17 2055 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Zfp977L7N2E7 438 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Zfp72Q0VFY0 435 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 H2-DMb2Q31099 261 aa13.14□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Atg2bQ80XK6 2075 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Trav13n-4A0A0G2JG01 110 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 CrygsO35486 178 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 MymxQ2Q5T5 84 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Oosp2Q4FZG8 168 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Olfr1380Q7TQT5 311 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Hist1h2bfP10853 126 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Cd81P35762 236 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 C1qtnf9Q4ZJN1 333 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Hist1h2bbQ64475 126 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Hist1h2bkQ8CGP1 126 aaKnown RBP13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Hist1h2bpQ8CGP2 126 aaKnown RBP13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 RtbdnQ8QZY4 247 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gm21616B6ZB74 166 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Reg1P43137 165 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Tac3P55099 116 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Cmc4Q61908 68 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Mbnl3Q8R003 342 aaKnown RBP13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Ankrd12G5E893 2041 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Cxcl13O55038 109 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 SlaQ60898 281 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Spink2Q8BMY7 86 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Dusp14Q9JLY7 198 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 F8Q06194 2319 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Kif26aQ52KG5 1881 aa13.13□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Trav4-4-dv10A0A075B651 110 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 1700084M14RikB1AT01 78 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Gm17727E9Q4V7 109 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 UngP97931 306 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Adra2aQ01338 450 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Mob4Q6PEB6 225 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Atp5iQ06185 71 aaKnown RBP13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Zic3Q62521 466 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Cdcp2Q8BQH6 427 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Rnf151Q9CQ29 239 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Olfr1369-ps1A0A140T8K7 317 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Rasl11aQ6IMB1 242 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 MNCb-2875Q9DCB3 74 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Tmem50aQ9CXL1 157 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Hyls1Q9CXX0 307 aa13.12□□□□□ -0.31
Clcn3-203ENSMUST00000093490 Psmg3Q9CZH3 122 aa13.12□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms