Protein–RNA interactions for Protein: Q8R297

Vmn1r235, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r235Q8R297 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Vmn1r235Q8R297 Gm25239-201ENSMUST00000174915 86 ntBASIC28.45■■■□□ 2.14
Vmn1r235Q8R297 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Vmn1r235Q8R297 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Vmn1r235Q8R297 Psd-208ENSMUST00000224556 2034 ntBASIC27.21■■□□□ 1.95
Vmn1r235Q8R297 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Vmn1r235Q8R297 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Vmn1r235Q8R297 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Vmn1r235Q8R297 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Vmn1r235Q8R297 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Vmn1r235Q8R297 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Vmn1r235Q8R297 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Vmn1r235Q8R297 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Vmn1r235Q8R297 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Vmn1r235Q8R297 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.67■■□□□ 1.7
Vmn1r235Q8R297 Gm15042-201ENSMUST00000120212 883 ntBASIC25.65■■□□□ 1.7
Vmn1r235Q8R297 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Vmn1r235Q8R297 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vmn1r235Q8R297 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Vmn1r235Q8R297 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Vmn1r235Q8R297 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Vmn1r235Q8R297 Gm15045-201ENSMUST00000117359 883 ntBASIC25.27■■□□□ 1.64
Vmn1r235Q8R297 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Vmn1r235Q8R297 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Vmn1r235Q8R297 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Vmn1r235Q8R297 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Vmn1r235Q8R297 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Vmn1r235Q8R297 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Vmn1r235Q8R297 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Vmn1r235Q8R297 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.85■■□□□ 1.57
Vmn1r235Q8R297 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Vmn1r235Q8R297 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.77■■□□□ 1.56
Vmn1r235Q8R297 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Vmn1r235Q8R297 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Vmn1r235Q8R297 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.73■■□□□ 1.55
Vmn1r235Q8R297 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Vmn1r235Q8R297 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.51■■□□□ 1.51
Vmn1r235Q8R297 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Vmn1r235Q8R297 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Vmn1r235Q8R297 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.47■■□□□ 1.51
Vmn1r235Q8R297 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vmn1r235Q8R297 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Vmn1r235Q8R297 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Vmn1r235Q8R297 Gm24109-201ENSMUST00000175489 103 ntBASIC24.33■■□□□ 1.49
Vmn1r235Q8R297 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.29■■□□□ 1.48
Vmn1r235Q8R297 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.26■■□□□ 1.47
Vmn1r235Q8R297 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Vmn1r235Q8R297 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Vmn1r235Q8R297 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Vmn1r235Q8R297 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Vmn1r235Q8R297 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Vmn1r235Q8R297 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Vmn1r235Q8R297 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Vmn1r235Q8R297 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Vmn1r235Q8R297 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vmn1r235Q8R297 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Vmn1r235Q8R297 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Vmn1r235Q8R297 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vmn1r235Q8R297 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Vmn1r235Q8R297 Gm23366-201ENSMUST00000175022 89 ntBASIC23.82■■□□□ 1.4
Vmn1r235Q8R297 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vmn1r235Q8R297 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vmn1r235Q8R297 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vmn1r235Q8R297 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.75■■□□□ 1.39
Vmn1r235Q8R297 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Vmn1r235Q8R297 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Vmn1r235Q8R297 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Vmn1r235Q8R297 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Vmn1r235Q8R297 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Vmn1r235Q8R297 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.57■■□□□ 1.36
Vmn1r235Q8R297 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Vmn1r235Q8R297 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Vmn1r235Q8R297 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Vmn1r235Q8R297 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Vmn1r235Q8R297 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Vmn1r235Q8R297 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Vmn1r235Q8R297 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vmn1r235Q8R297 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Vmn1r235Q8R297 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Vmn1r235Q8R297 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Vmn1r235Q8R297 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Vmn1r235Q8R297 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r235Q8R297 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Vmn1r235Q8R297 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Vmn1r235Q8R297 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Vmn1r235Q8R297 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Vmn1r235Q8R297 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Vmn1r235Q8R297 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r235Q8R297 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vmn1r235Q8R297 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r235Q8R297 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.03■■□□□ 1.28
Vmn1r235Q8R297 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r235Q8R297 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r235Q8R297 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Vmn1r235Q8R297 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r235Q8R297 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vmn1r235Q8R297 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vmn1r235Q8R297 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r235Q8R297 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vmn1r235Q8R297 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms