RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 MED12LQ86YW9 2145 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 A0A0U1RRA0 63 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 OVOL3O00110 214 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 MALP21145 153 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 CLEC2BQ92478 149 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 AJUBAQ96IF1 538 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 RIF1Q5UIP0 2472 aaKnown RBP3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 INTS1Q8N201 2190 aaKnown RBP3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 H7C423 109 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 IGHG2P01859 326 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 SMCPP49901 116 aaPredicted RBP3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 ZFAND2AQ8N6M9 145 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 SERP2Q8N6R1 65 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 MGAQ8IWI9 3026 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 HCFC1P51610 2035 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 RPS28P62857 69 aaKnown RBP3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 FAM222AQ5U5X8 452 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 NRGNQ92686 78 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 PRO3102Q9H379 93 aa3.8□□□□□ -1.8
HNRNPU-230ENST00000640657 TMEM89A2RUT3 159 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 NDUFA1O15239 70 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 RNASE1P07998 156 aaKnown RBP3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 HIST2H2BCQ6DN03 193 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 HIST2H2BDQ6DRA6 164 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 TMEM61Q8N0U2 210 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 IGLV4-3A0A075B6K6 122 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 KNCNA6PVL3 124 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 NDUFC2-KCTD14E9PQ53 114 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 COX6B1P14854 86 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 RPL18AQ02543 176 aaKnown RBP3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 TMEM243Q9BU79 118 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 U3KQE9 123 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 IGLV4-69A0A075B6H9 119 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 SMIM9A6NGZ8 99 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 C6orf226Q5I0X4 101 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 C11orf44Q8N8P7 122 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 ITLN2Q8WWU7 325 aaPredicted RBP3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 C11orf21Q9P2W6 132 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 CACNA1EQ15878 2313 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 MAP1BP46821 2468 aaKnown RBP3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 TANC2Q9HCD6 1990 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 IGHV3-73A0A0B4J1V6 119 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 GAS8-AS1O95177 125 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 PDE6GP18545 87 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 DSCR9P59020 149 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 STHQ8IWL8 128 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 Q8N6K4 173 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 MRAPQ8TCY5 172 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 MSRB2Q9Y3D2 182 aa3.79□□□□□ -1.8
HNRNPU-230ENST00000640657 IGHV3-16A0A0C4DH30 117 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 NXPH4O95158 308 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 DAZ2Q13117 558 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 SPINK13Q1W4C9 94 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 PIK3CD-AS1Q5SR53 167 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 Q6JHZ5 121 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 Q6ZS46 218 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 DAZ4Q86SG3 579 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 DAZ3Q9NR90 486 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 M0QY20 66 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 GPHB5Q86YW7 130 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 C5orf56Q8N8D9 126 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 DEFB104AQ8WTQ1 72 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 CCDC140Q96MF4 163 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 LAMTOR3Q9UHA4 124 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 VPREB3Q9UKI3 123 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 FREM1Q5H8C1 2179 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 GATA3P23771 443 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 ATP5EP56381 51 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 MRPS36P82909 103 aaKnown RBP3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 SS18Q15532 418 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 MRGPRG-AS1Q2M3A8 158 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 LINC00308Q8TCZ7 52 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 ZNF625Q96I27 306 aaPredicted RBP3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 KLK9Q9UKQ9 250 aa3.78□□□□□ -1.8
HNRNPU-230ENST00000640657 TRGV2A0A075B6R0 118 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 H3BUX3 64 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 SND1-IT1Q9HBX3 110 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 PTPRZ1P23471 2315 aaPredicted RBP3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 CACNA1HO95180 2353 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 GVINP1Q7Z2Y8 2422 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 IGHV3OR16-12A0A075B7B8 117 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 IGHV3OR16-10A0A075B7F0 116 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 F6UB75 175 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 RUSC1-AS1Q66K80 236 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 ZFHX2Q9C0A1 2572 aaPredicted RBP3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 TRGV4A0A0C4DH28 118 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 IGKV3OR2-268A0A0C4DH90 116 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 TMEM256-PLSCR3K7ERE1 68 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 ELANEP08246 267 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 LINC00694P0DN24 101 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 RNASE3P12724 160 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 PSMB8P28062 276 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 PIP4P1Q86T03 277 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 JPT2Q9H910 190 aa3.77□□□□□ -1.81
HNRNPU-230ENST00000640657 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 NDUFC1O43677 76 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 DEFB121Q5J5C9 76 aa3.76□□□□□ -1.81
HNRNPU-230ENST00000640657 POM121L12Q8N7R1 296 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms