RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 USP9XQ93008 2570 aaPredicted RBP10.95□□□□□ -0.66
CTCFL-219ENST00000608720 IGLV4-69A0A075B6H9 119 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 C11orf86A6NJI1 115 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 GAGE2EQ4V326 116 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 ANKRD29Q8N6D5 301 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 GAGE2DQ9UEU5 116 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 F5H697 171 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 GNLYP22749 145 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 PLEKHB2Q96CS7 222 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 ODF3Q96PU9 254 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 CCL19Q99731 98 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 JPT2Q9H910 190 aa10.94□□□□□ -0.66
CTCFL-219ENST00000608720 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 LGALS9O00182 355 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 ZNF843Q8N446 348 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 ZNF580Q9UK33 172 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 A0A087WWL8 130 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 TRAV12-3A0A0B4J271 114 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 C10orf126Q8N4M7 172 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 LRRK2Q5S007 2527 aa10.93□□□□□ -0.66
CTCFL-219ENST00000608720 CSMD2Q7Z408 3487 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 SDHAF1A6NFY7 115 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 MSMBP08118 114 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 SCGB1C2P0DMR2 95 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 KLHL30-AS1Q8NEE0 82 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 SNCGO76070 127 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 SHISA2Q6UWI4 295 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 C9orf85Q96MD7 179 aa10.92□□□□□ -0.66
CTCFL-219ENST00000608720 ASH1LQ9NR48 2969 aaKnown RBP10.91□□□□□ -0.66
CTCFL-219ENST00000608720 IFITM1P13164 125 aa10.91□□□□□ -0.66
CTCFL-219ENST00000608720 EDN2P20800 178 aa10.91□□□□□ -0.66
CTCFL-219ENST00000608720 RPL39P62891 51 aaKnown RBP10.91□□□□□ -0.66
CTCFL-219ENST00000608720 UBR5O95071 2799 aaPredicted RBP10.91□□□□□ -0.66
CTCFL-219ENST00000608720 IGHV3-16A0A0C4DH30 117 aa10.9□□□□□ -0.66
CTCFL-219ENST00000608720 A0A0J9YY99 117 aa10.9□□□□□ -0.66
CTCFL-219ENST00000608720 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.66
CTCFL-219ENST00000608720 CELSR2Q9HCU4 2923 aa10.9□□□□□ -0.66
CTCFL-219ENST00000608720 IGHV4-30-2A0A087WSY4 118 aa10.9□□□□□ -0.66
CTCFL-219ENST00000608720 ATP5J2P56134 94 aa10.9□□□□□ -0.66
CTCFL-219ENST00000608720 ZNF876PQ49A33 203 aa10.9□□□□□ -0.66
CTCFL-219ENST00000608720 SLC25A20O43772 301 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 PSMB8P28062 276 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 EMP1P54849 157 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 HERV-K104P63124 156 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 TTC32Q5I0X7 151 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 A0A0J9YX75 114 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 CFC1BP0CG36 223 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 CFC1P0CG37 223 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 SNRPD3P62318 126 aaKnown RBP10.89□□□□□ -0.67
CTCFL-219ENST00000608720 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
CTCFL-219ENST00000608720 M0QY20 66 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 IGHV3-30P01768 117 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 IGHV3-30-5P0DP03 117 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 RHOHQ15669 191 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 MRPL23Q16540 153 aaKnown RBP10.88□□□□□ -0.67
CTCFL-219ENST00000608720 FAM74A4Q5TZK3 123 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 PRO1854Q9UHT4 67 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 P0DMU3 169 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 FAM231AP0DMU4 169 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 FAM231CP0DMU5 169 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 SLC25A29Q8N8R3 303 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 ZNRF2Q8NHG8 242 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 DEFB104AQ8WTQ1 72 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 MDFICQ9P1T7 246 aa10.88□□□□□ -0.67
CTCFL-219ENST00000608720 MUC4Q99102 2169 aa10.87□□□□□ -0.67
CTCFL-219ENST00000608720 AKAP6Q13023 2319 aa10.87□□□□□ -0.67
CTCFL-219ENST00000608720 TMEM89A2RUT3 159 aa10.87□□□□□ -0.67
CTCFL-219ENST00000608720 RPL13AP40429 203 aaKnown RBP10.87□□□□□ -0.67
CTCFL-219ENST00000608720 ZNF56Q15929 161 aa10.87□□□□□ -0.67
CTCFL-219ENST00000608720 NSUN5P1Q3KNT7 163 aa10.87□□□□□ -0.67
CTCFL-219ENST00000608720 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
CTCFL-219ENST00000608720 ZNF256Q9Y2P7 627 aaPredicted RBP10.87□□□□□ -0.67
CTCFL-219ENST00000608720 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 B4DSR2 109 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 CCDC179H3BU77 68 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 ABCA2Q9BZC7 2435 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 TRAV4A0A0B4J268 109 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 K7EQG2 157 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 AVPP01185 164 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 Q8N1Y9 231 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 TNFRSF18Q9Y5U5 241 aa10.86□□□□□ -0.67
CTCFL-219ENST00000608720 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
CTCFL-219ENST00000608720 J3QQQ9 107 aa10.85□□□□□ -0.67
CTCFL-219ENST00000608720 LGALS3P17931 250 aaKnown RBP10.85□□□□□ -0.67
CTCFL-219ENST00000608720 TSPEAR-AS2P59090 65 aa10.85□□□□□ -0.67
CTCFL-219ENST00000608720 SFTA2Q6UW10 78 aa10.85□□□□□ -0.67
CTCFL-219ENST00000608720 VPS13CQ709C8 3753 aa10.85□□□□□ -0.67
CTCFL-219ENST00000608720 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
CTCFL-219ENST00000608720 SMIM20Q8N5G0 67 aa10.85□□□□□ -0.67
CTCFL-219ENST00000608720 MAP1AP78559 2803 aaPredicted RBP10.84□□□□□ -0.67
CTCFL-219ENST00000608720 AMELXQ99217 191 aa10.84□□□□□ -0.67
CTCFL-219ENST00000608720 A0A0B4J2C4 111 aa10.83□□□□□ -0.68
CTCFL-219ENST00000608720 C9JAW5 83 aa10.83□□□□□ -0.68
CTCFL-219ENST00000608720 I3L3M4 83 aa10.83□□□□□ -0.68
CTCFL-219ENST00000608720 LEPROTO15243 131 aa10.83□□□□□ -0.68
CTCFL-219ENST00000608720 RNF152Q8N8N0 203 aa10.83□□□□□ -0.68
CTCFL-219ENST00000608720 TMEM223A0PJW6 202 aa10.82□□□□□ -0.68
CTCFL-219ENST00000608720 IGHV4-59P01825 116 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 612.5 ms