RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CLLU1Q5K131 121 aa6.47□□□□□ -1.37
NPLOC4-219ENST00000576713 ZFP2Q6ZN57 461 aa6.47□□□□□ -1.37
NPLOC4-219ENST00000576713 Q6ZR54 194 aa6.47□□□□□ -1.37
NPLOC4-219ENST00000576713 LY96Q9Y6Y9 160 aa6.47□□□□□ -1.37
NPLOC4-219ENST00000576713 FOXA3P55318 350 aaPredicted RBP6.46□□□□□ -1.38
NPLOC4-219ENST00000576713 CCL18P55774 89 aa6.46□□□□□ -1.38
NPLOC4-219ENST00000576713 SLAQ13239 276 aa6.46□□□□□ -1.38
NPLOC4-219ENST00000576713 SUMO4Q6EEV6 95 aa6.46□□□□□ -1.38
NPLOC4-219ENST00000576713 FAM231DQ6ZW35 169 aa6.46□□□□□ -1.38
NPLOC4-219ENST00000576713 ISOC2Q96AB3 205 aa6.46□□□□□ -1.38
NPLOC4-219ENST00000576713 MRPS16Q9Y3D3 137 aaKnown RBP6.46□□□□□ -1.38
NPLOC4-219ENST00000576713 GAGE12JA6NER3 117 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 RTL8CO15255 209 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 GATCO43716 136 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 EVI2AP22794 236 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 SRIP30626 198 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 ERVFC1-1P60608 527 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 RPS20P60866 119 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 GAGE1Q13065 139 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 GAGE4Q13068 117 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 GAGE5Q13069 117 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 PEA15Q15121 130 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 RHOHQ15669 191 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 MRPL23Q16540 153 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 NDUFA5Q16718 116 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 TMEM241Q24JQ0 296 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 SPANXN1Q5VSR9 72 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 NEGR1Q7Z3B1 354 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 WFDC10BQ8IUB3 73 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 UPK3BQ9BT76 320 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 V9GYV3 84 aa6.45□□□□□ -1.38
NPLOC4-219ENST00000576713 CIDEAO60543 219 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 NTF3P20783 257 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 ADIRFQ15847 76 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 CNFNQ9BYD5 112 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 Q9H8V8 135 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 BIN3Q9NQY0 253 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 NAT8Q9UHE5 227 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 COX11Q9Y6N1 276 aa6.44□□□□□ -1.38
NPLOC4-219ENST00000576713 LRP1BQ9NZR2 4599 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 NBDYA0A0U1RRE5 68 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 RHODO00212 210 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 ADCYAP1P18509 176 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 S100A1P23297 94 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 FAM3BP58499 235 aaPredicted RBP6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 RAB14P61106 215 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 FAM74A3Q4VXF1 159 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 PGLYRP4Q96LB8 373 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 PRADC1Q9BSG0 188 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 SMDT1Q9H4I9 107 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 OSTCQ9NRP0 149 aa6.43□□□□□ -1.38
NPLOC4-219ENST00000576713 A0A1W2PPQ1 181 aa6.42□□□□□ -1.38
NPLOC4-219ENST00000576713 F2Z2F3 143 aa6.42□□□□□ -1.38
NPLOC4-219ENST00000576713 ZNF56Q15929 161 aa6.42□□□□□ -1.38
NPLOC4-219ENST00000576713 SOHLH1Q5JUK2 328 aa6.42□□□□□ -1.38
NPLOC4-219ENST00000576713 NEXN-AS1Q8NBZ9 246 aa6.42□□□□□ -1.38
NPLOC4-219ENST00000576713 AP1S3Q96PC3 154 aa6.42□□□□□ -1.38
NPLOC4-219ENST00000576713 TNFRSF18Q9Y5U5 241 aa6.42□□□□□ -1.38
NPLOC4-219ENST00000576713 TRAV26-2A0A0B4J265 109 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 XKRY2A2RUG3 117 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 HIGD1CA8MV81 97 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 A8MWL6 223 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 M0QY20 66 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 GAS8-AS1O95177 125 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 MGPP08493 103 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 RAB4BP61018 213 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 UBE2D3P61077 147 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 UBE2D2P62837 147 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 CACNG7P62955 275 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 TWIST1Q15672 202 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 ATP6V0E2Q8NHE4 81 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 TSKUQ8WUA8 353 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
NPLOC4-219ENST00000576713 APOBP04114 4563 aaKnown RBP6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 IGHV3-38A0A0C4DH36 116 aa6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 SIVA1O15304 175 aa6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 WDR73Q6P4I2 378 aa6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 NUP35Q8NFH5 326 aa6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 OR10G8Q8NGN5 311 aa6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 DEFB104AQ8WTQ1 72 aa6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 GTSF1LQ9H1H1 148 aa6.4□□□□□ -1.38
NPLOC4-219ENST00000576713 TRBV10-1A0A0K0K1A3 114 aa6.39□□□□□ -1.39
NPLOC4-219ENST00000576713 SMIM27A0A1W2PRY6 76 aa6.39□□□□□ -1.39
NPLOC4-219ENST00000576713 PRYO14603 147 aa6.39□□□□□ -1.39
NPLOC4-219ENST00000576713 NTM-AS1Q6ZSK4 140 aa6.39□□□□□ -1.39
NPLOC4-219ENST00000576713 COMMD7Q86VX2 200 aa6.39□□□□□ -1.39
NPLOC4-219ENST00000576713 GATD1Q8NB37 220 aa6.39□□□□□ -1.39
NPLOC4-219ENST00000576713 DPH3P1Q9H4G8 78 aa6.39□□□□□ -1.39
NPLOC4-219ENST00000576713 TRBV7-3A0A075B6L6 115 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 A0A1B0GVY2 172 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 LINC00862A6NCI5 91 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 DNAH10OSP0CZ25 163 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 SMIM17P0DL12 118 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 LELP1Q5T871 98 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 Q6ZRN7 208 aaPredicted RBP6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 C15orf54Q8N8G6 183 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 RPL39LQ96EH5 51 aaKnown RBP6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 RNF185Q96GF1 192 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 DNAJC30Q96LL9 226 aa6.38□□□□□ -1.39
NPLOC4-219ENST00000576713 GFRA4Q9GZZ7 299 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms