RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 NUP210Q8TEM1 1887 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-210ENST00000557206 GBF1Q92538 1859 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 A0A087WSZ3 146 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 MUC21A0A140T8X8 626 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 TCRBV4S1A1TA0A5B7 111 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 hADV29S1A0JD25 119 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 CRYM-AS1A6NIL9 109 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 IBA57-AS1B1ANH7 110 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 B4DSR2 109 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 CCKP06307 115 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 CXCL8P10145 99 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 MIFP14174 115 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 UBE2G1P62253 170 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 HMGN3Q15651 99 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 REG4Q9BYZ8 158 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 CACNA1GO43497 2377 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 RGPD8O14715 1765 aaPredicted RBP1.74□□□□□ -2.13
HIF1A-210ENST00000557206 LTN1O94822 1766 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 ROBO1Q9Y6N7 1651 aa1.74□□□□□ -2.13
HIF1A-210ENST00000557206 RBBP6Q7Z6E9 1792 aaKnown RBP1.73□□□□□ -2.13
HIF1A-210ENST00000557206 ABCC6O95255 1503 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 TRBV10-3A0A0K0K1G6 114 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 H3BRM9 83 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 PRB1P04280 392 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 Q1T7F1 81 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 TDRG1Q3Y452 100 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 C9orf116Q5BN46 136 aaPredicted RBP1.73□□□□□ -2.13
HIF1A-210ENST00000557206 SERP2Q8N6R1 65 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 SPTSSBQ8NFR3 76 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 TSLPQ969D9 159 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 NDUFB11Q9NX14 153 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 CACFD1Q9UGQ2 172 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 KIAA1551Q9HCM1 1747 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 PARP4Q9UKK3 1724 aaKnown RBP1.73□□□□□ -2.13
HIF1A-210ENST00000557206 RALGAPA2Q2PPJ7 1873 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 NHSL1Q5SYE7 1610 aa1.73□□□□□ -2.13
HIF1A-210ENST00000557206 SORL1Q92673 2214 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 MARF1Q9Y4F3 1742 aaKnown RBP1.72□□□□□ -2.13
HIF1A-210ENST00000557206 SHPRHQ149N8 1683 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 USP54Q70EL1 1684 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 ALS2Q96Q42 1657 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 C1orf167Q5SNV9 1468 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 CDK12Q9NYV4 1490 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-210ENST00000557206 TRAV13-2A0A0B4J235 113 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 TRAV12-1A0A0B4J245 112 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 KANTRA0A1W2PQU2 76 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 SMIM11AP58511 58 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 MPV17LQ2QL34 196 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 TRGV9Q99603 122 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 C20orf78Q9BR46 151 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 CYP4F30PQ9H0H9 118 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 MUC6Q6W4X9 2439 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 MAP2P11137 1827 aaKnown RBP1.72□□□□□ -2.13
HIF1A-210ENST00000557206 FOCADQ5VW36 1801 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 PHRF1Q9P1Y6 1649 aaKnown RBP1.72□□□□□ -2.13
HIF1A-210ENST00000557206 BLMP54132 1417 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-210ENST00000557206 MYH10P35580 1976 aa1.72□□□□□ -2.13
HIF1A-210ENST00000557206 COL14A1Q05707 1796 aaKnown RBP1.72□□□□□ -2.13
HIF1A-210ENST00000557206 ABCA3Q99758 1704 aa1.71□□□□□ -2.13
HIF1A-210ENST00000557206 NWD2Q9ULI1 1742 aa1.71□□□□□ -2.13
HIF1A-210ENST00000557206 PLCH1Q4KWH8 1693 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 TMSB15BA0A087X1C1 80 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 A0A1W2PPM0 123 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 NUPR1O60356 82 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 MIR22HGQ0VDD5 57 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 DEFB113Q30KQ7 82 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 ZCCHC23Q6ZST2 131 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 CLECL1Q8IZS7 167 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 C4orf3Q8WVX3 66 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 Q9BRP9 147 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 NXT2Q9NPJ8 142 aaKnown RBP1.71□□□□□ -2.14
HIF1A-210ENST00000557206 FER1L6Q2WGJ9 1857 aa1.71□□□□□ -2.14
HIF1A-210ENST00000557206 WNK3Q9BYP7 1800 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 PXDNQ92626 1479 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 TRBV7-1A0A0A6YYK4 115 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 IGKV2-29A2NJV5 120 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-210ENST00000557206 SYS1-DBNDD2H3BUS1 97 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 CCL16O15467 120 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 CFDP00746 253 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-210ENST00000557206 IGLC2P0DOY2 106 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 IGLC3P0DOY3 106 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 PRB4P10163 310 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-210ENST00000557206 ZNF791Q3KP31 576 aaPredicted RBP1.7□□□□□ -2.14
HIF1A-210ENST00000557206 Q5BKY6 102 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 NDUFA11Q86Y39 141 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 ECM29Q5VYK3 1845 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 LMO7Q8WWI1 1683 aa1.7□□□□□ -2.14
HIF1A-210ENST00000557206 OTOGLQ3ZCN5 2332 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 ICE1Q9Y2F5 2266 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 A0A0G2JQZ4 141 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 TMEM30CPA0ZSE6 113 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 HCG22E2RYF7 251 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 ELOBQ15370 118 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 ETDBQ3ZM63 59 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 BVES-AS1Q5T3Y7 98 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.69□□□□□ -2.14
HIF1A-210ENST00000557206 CYP2G1PQ6ZSU1 146 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 ZNF833PQ6ZTB9 187 aa1.69□□□□□ -2.14
HIF1A-210ENST00000557206 Q8TAT8 98 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms