RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 RNF212Q495C1 297 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 ZFP2Q6ZN57 461 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 Q6ZTI0 123 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 SMIM29Q86T20 159 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 GTSF1Q8WW33 167 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 BORCS7Q96B45 105 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 NAT8BQ9UHF3 227 aa4.05□□□□□ -1.76
SCAF11-213ENST00000550629 TRGV2A0A075B6R0 118 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 TRAV9-1A0A075B6T8 112 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 TRAV4A0A0B4J268 109 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 A0A1B0GUT8 65 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 C7orf77A4D0Y5 90 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 HIGD1CA8MV81 97 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 S100A8P05109 93 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 ATP5G1P05496 136 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 DEFB130BP0DP73 79 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 DEFB130AP0DP74 79 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 GZMBP10144 247 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 SLAQ13239 276 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 C12orf74Q32Q52 190 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 SPANXN1Q5VSR9 72 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 LYZL1Q6UWQ5 148 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 OR10AG1Q8NH19 301 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 FAM210BQ96KR6 192 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 AP1S3Q96PC3 154 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 TPPP3Q9BW30 176 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 MRPL16Q9NX20 251 aaKnown RBP4.04□□□□□ -1.76
SCAF11-213ENST00000550629 CELA1Q9UNI1 258 aa4.04□□□□□ -1.76
SCAF11-213ENST00000550629 PRKDCP78527 4128 aaKnown RBP4.04□□□□□ -1.76
SCAF11-213ENST00000550629 TRAV10A0A0B4J240 114 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 PRSS47A8MTI9 375 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 H3BNG1 76 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 M0R381 172 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 RS1O15537 224 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 TRGC1P0CF51 173 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 NTF3P20783 257 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 S100PP25815 95 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 RIGQ13278 110 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 CFAP126Q5VTH2 177 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 KCNIP4Q6PIL6 250 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 SMIM15Q7Z3B0 74 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 ATP5L2Q7Z4Y8 100 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 NUP35Q8NFH5 326 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 OR4C5Q8NGB2 326 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 FRZBQ92765 325 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 BTF3L4Q96K17 158 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 PGLYRP4Q96LB8 373 aa4.03□□□□□ -1.76
SCAF11-213ENST00000550629 NUPR2A6NF83 97 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 SMIM17P0DL12 118 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 S100A1P23297 94 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 TCTAP57738 103 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 UFSP1Q6NVU6 142 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 RASL11AQ6T310 242 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 POM121L12Q8N7R1 296 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 RPS10P5Q9NQ39 176 aa4.02□□□□□ -1.77
SCAF11-213ENST00000550629 DEFB131BA0A096LNP1 70 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 MUC21A0A0G2JKD1 596 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 MUC21A0A140T8X8 626 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 TRBV6-4A0A1B0GX49 114 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 A0A1B0GXF2 115 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 CRYGDP07320 174 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 GATA1P15976 413 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-213ENST00000550629 RAB4BP61018 213 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 HBBP68871 147 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 CEMP1Q6PRD7 247 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-213ENST00000550629 C14orf178Q8N769 122 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-213ENST00000550629 GATD1Q8NB37 220 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 MUC7Q8TAX7 377 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 PHLDA1Q8WV24 401 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-213ENST00000550629 TMEM191AQ9H0A3 160 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 DPH3P1Q9H4G8 78 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 PRO0255Q9UI72 69 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 HHLA3Q9XRX5 114 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 KLK5Q9Y337 293 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-213ENST00000550629 KIF25-AS1Q9Y6Z4 181 aa4.01□□□□□ -1.77
SCAF11-213ENST00000550629 TRBV24-1A0A075B6N3 115 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 TRGV4A0A0C4DH28 118 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 TRBV10-1A0A0K0K1A3 114 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 GAGE10A6NGK3 116 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 F5H768 121 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 C3orf84H3BNL1 204 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 H7C1H1 209 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 IGHV3-53P01767 116 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 EVI2AP22794 236 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 LINC00315P59091 139 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 COX19Q49B96 90 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 SH2D6Q7Z4S9 175 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 C15orf53Q8NAA6 179 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 JPT2Q9H910 190 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 SMCO4Q9NRQ5 59 aa4□□□□□ -1.77
SCAF11-213ENST00000550629 TRAV26-1A0A087WT03 109 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 ATP6V1G1O75348 118 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 PPP1R17O96001 155 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 PPBPP02775 128 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 MT-ND6P03923 174 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 HTN3P15516 51 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 CAMPP49913 170 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 CRYBA4P53673 196 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 KRTAP10-5P60370 271 aa3.99□□□□□ -1.77
SCAF11-213ENST00000550629 SEC61BP60468 96 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms