RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 CRYBG3Q68DQ2 2970 aa10.19□□□□□ -0.78
VPS33A-208ENST00000543633 EMP1P54849 157 aa10.18□□□□□ -0.78
VPS33A-208ENST00000543633 BLCAPP62952 87 aa10.18□□□□□ -0.78
VPS33A-208ENST00000543633 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
VPS33A-208ENST00000543633 ASH1LQ9NR48 2969 aaKnown RBP10.18□□□□□ -0.78
VPS33A-208ENST00000543633 TRGV11A0A075B6L2 103 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 I3L3M4 83 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 K7EQG2 157 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 PSMB8P28062 276 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.17□□□□□ -0.78
VPS33A-208ENST00000543633 MSMBP08118 114 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 P0DMU3 169 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 FAM231AP0DMU4 169 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 FAM231CP0DMU5 169 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 ZNF22P17026 224 aaPredicted RBP10.17□□□□□ -0.78
VPS33A-208ENST00000543633 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
VPS33A-208ENST00000543633 RHODO00212 210 aa10.16□□□□□ -0.78
VPS33A-208ENST00000543633 SRD5A1P18405 259 aa10.16□□□□□ -0.78
VPS33A-208ENST00000543633 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
VPS33A-208ENST00000543633 Q8N1Y9 231 aa10.16□□□□□ -0.78
VPS33A-208ENST00000543633 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
VPS33A-208ENST00000543633 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
VPS33A-208ENST00000543633 LRRK2Q5S007 2527 aa10.15□□□□□ -0.78
VPS33A-208ENST00000543633 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
VPS33A-208ENST00000543633 IGHV3-33P01772 117 aa10.15□□□□□ -0.78
VPS33A-208ENST00000543633 ZNF688P0C7X2 276 aa10.15□□□□□ -0.78
VPS33A-208ENST00000543633 GATA3P23771 443 aa10.15□□□□□ -0.78
VPS33A-208ENST00000543633 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
VPS33A-208ENST00000543633 CARD19Q96LW7 228 aa10.15□□□□□ -0.78
VPS33A-208ENST00000543633 CCL19Q99731 98 aa10.15□□□□□ -0.78
VPS33A-208ENST00000543633 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
VPS33A-208ENST00000543633 M0R2P5 195 aa10.14□□□□□ -0.79
VPS33A-208ENST00000543633 FAM208BQ5VWN6 2430 aa10.14□□□□□ -0.79
VPS33A-208ENST00000543633 A4D1N5 150 aa10.14□□□□□ -0.79
VPS33A-208ENST00000543633 EDN2P20800 178 aa10.14□□□□□ -0.79
VPS33A-208ENST00000543633 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
VPS33A-208ENST00000543633 Q6ZUT4 128 aa10.14□□□□□ -0.79
VPS33A-208ENST00000543633 AKAP6Q13023 2319 aa10.13□□□□□ -0.79
VPS33A-208ENST00000543633 SCGB1C2P0DMR2 95 aa10.13□□□□□ -0.79
VPS33A-208ENST00000543633 CKS1BP61024 79 aa10.13□□□□□ -0.79
VPS33A-208ENST00000543633 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
VPS33A-208ENST00000543633 MED13LQ71F56 2210 aa10.13□□□□□ -0.79
VPS33A-208ENST00000543633 FBN2P35556 2912 aa10.12□□□□□ -0.79
VPS33A-208ENST00000543633 B4DSR2 109 aa10.12□□□□□ -0.79
VPS33A-208ENST00000543633 SPINK8P0C7L1 97 aa10.12□□□□□ -0.79
VPS33A-208ENST00000543633 MRPS36P82909 103 aaKnown RBP10.12□□□□□ -0.79
VPS33A-208ENST00000543633 SFTA2Q6UW10 78 aa10.12□□□□□ -0.79
VPS33A-208ENST00000543633 ANKRD29Q8N6D5 301 aa10.12□□□□□ -0.79
VPS33A-208ENST00000543633 A8MTW9 85 aa10.11□□□□□ -0.79
VPS33A-208ENST00000543633 SLC25A20O43772 301 aa10.11□□□□□ -0.79
VPS33A-208ENST00000543633 FHL3Q13643 280 aa10.11□□□□□ -0.79
VPS33A-208ENST00000543633 PTH2Q96A98 100 aa10.11□□□□□ -0.79
VPS33A-208ENST00000543633 TRAV12-2A0A075B6T6 113 aa10.11□□□□□ -0.79
VPS33A-208ENST00000543633 SPINK13Q1W4C9 94 aa10.11□□□□□ -0.79
VPS33A-208ENST00000543633 TENM4Q6N022 2769 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 CELSR2Q9HCU4 2923 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 IGHV4-30-2A0A087WSY4 118 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 A0A0J9YXY3 114 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 EIF4EBP3O60516 100 aaPredicted RBP10.1□□□□□ -0.79
VPS33A-208ENST00000543633 XGP55808 180 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 ATXN8Q156A1 80 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 WFDC12Q8WWY7 111 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 SPANXDQ9BXN6 97 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 SPANXCQ9NY87 97 aa10.1□□□□□ -0.79
VPS33A-208ENST00000543633 TRAV2A0A0B4J234 112 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 TRBV30A0A0K0K1B3 111 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 ATP5J2P56134 94 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 DSCR9P59020 149 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 MUSTN1Q8IVN3 82 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 RNF183Q96D59 192 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 OPRPNQ99935 248 aaPredicted RBP10.09□□□□□ -0.79
VPS33A-208ENST00000543633 TIMM21Q9BVV7 248 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 CSMD1Q96PZ7 3565 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 CD28P10747 220 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 Q5PR19 223 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 SPANXA1Q9NS26 97 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 CSMD2Q7Z408 3487 aa10.09□□□□□ -0.79
VPS33A-208ENST00000543633 MT-ATP8P03928 68 aa10.08□□□□□ -0.8
VPS33A-208ENST00000543633 ELANEP08246 267 aa10.08□□□□□ -0.8
VPS33A-208ENST00000543633 IGHV3-30-3P0DP02 117 aa10.08□□□□□ -0.8
VPS33A-208ENST00000543633 USP9YO00507 2555 aaPredicted RBP10.08□□□□□ -0.8
VPS33A-208ENST00000543633 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 C9JAW5 83 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 TMEM95Q3KNT9 176 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 DEFB104AQ8WTQ1 72 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 LITAFQ99732 161 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 IGKV3-20P01619 116 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 PLA2G2AP14555 144 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 RPL13AP40429 203 aaKnown RBP10.07□□□□□ -0.8
VPS33A-208ENST00000543633 LINC01620Q4KN68 170 aa10.07□□□□□ -0.8
VPS33A-208ENST00000543633 TIMM17BO60830 172 aa10.06□□□□□ -0.8
VPS33A-208ENST00000543633 RAX2Q96IS3 184 aa10.06□□□□□ -0.8
VPS33A-208ENST00000543633 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
VPS33A-208ENST00000543633 VPS13CQ709C8 3753 aa10.06□□□□□ -0.8
VPS33A-208ENST00000543633 J3QLI3 93 aa10.06□□□□□ -0.8
VPS33A-208ENST00000543633 AVPP01185 164 aa10.06□□□□□ -0.8
VPS33A-208ENST00000543633 LINC00467Q9BRT7 94 aa10.06□□□□□ -0.8
VPS33A-208ENST00000543633 SPG11Q96JI7 2443 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms