RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 IGHV3-30-5P0DP03 117 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 C4orf48Q5BLP8 95 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 RITA1Q96K30 269 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 PKDREJQ9NTG1 2253 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 KIAA2026Q5HYC2 2103 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 P0DMU3 169 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 FAM231AP0DMU4 169 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 FAM231CP0DMU5 169 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 A6NED7 52 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 IGHV4-38-2P0DP08 117 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 UPK3BQ9BT76 320 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 NACAE9PAV3 2078 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 TANC1Q9C0D5 1861 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 PLCE1Q9P212 2302 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 TIMM17BO60830 172 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 NDUFA7O95182 113 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 FSTL3O95633 263 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 TCL1BO95988 128 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 PHF3Q92576 2039 aaKnown RBP5.81□□□□□ -1.48
CTNND1-233ENST00000532787 FRMPD3Q5JV73 1810 aa5.81□□□□□ -1.48
CTNND1-233ENST00000532787 DOCK8Q8NF50 2099 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 NDUFC1O43677 76 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 CREBBPQ92793 2442 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 NUP210Q8TEM1 1887 aaPredicted RBP5.8□□□□□ -1.48
CTNND1-233ENST00000532787 IGLC6P0CF74 106 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 KIR2DL5BQ8NHK3 375 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 EP400Q96L91 3159 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 SDK2Q58EX2 2172 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 IGLV10-54A0A075B6I4 117 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 BPY2O14599 106 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 DEFB136Q30KP8 78 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 KLK5Q9Y337 293 aaPredicted RBP5.8□□□□□ -1.48
CTNND1-233ENST00000532787 LOXL1Q08397 574 aaPredicted RBP5.8□□□□□ -1.48
CTNND1-233ENST00000532787 FBXL19-AS1Q494R0 122 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 IL17DQ8TAD2 202 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 SIRPDQ9H106 197 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 MGAMO43451 1857 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 SMIM9A6NGZ8 99 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 LYRM9A8MSI8 78 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 F8W735 103 aaPredicted RBP5.8□□□□□ -1.48
CTNND1-233ENST00000532787 SPRNQ5BIV9 151 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 IMUPQ9GZP8 106 aa5.8□□□□□ -1.48
CTNND1-233ENST00000532787 A6NDX4 124 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 WT1P19544 449 aaPredicted RBP5.79□□□□□ -1.48
CTNND1-233ENST00000532787 LRRC75A-AS1Q8N1F1 130 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 DAND5Q8N907 189 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 NEXN-AS1Q8NBZ9 246 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 CACNA1EQ15878 2313 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.79□□□□□ -1.489e-7■■■□□ 18
CTNND1-233ENST00000532787 ABCA4P78363 2273 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 IGHV4-30-2A0A087WSY4 118 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 TRBV30A0A0K0K1B3 111 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 RBX1P62877 108 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 BLCAPP62952 87 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 Q8N7P7 452 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 FAM110AQ9BQ89 295 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
CTNND1-233ENST00000532787 IBA57-AS1B1ANH7 110 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 ZFAND2AQ8N6M9 145 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 HRCT1Q6UXD1 115 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 IGKV1D-37A0A075B6S9 117 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 SPRY2O43597 315 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 FANCD2OSQ96PS1 177 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 SPRY4Q9C004 299 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 IGLV2-8P01709 118 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 FAM222AQ5U5X8 452 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 COL4A6Q14031 1691 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 TMEM223A0PJW6 202 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 SEM1Q6ZVN7 128 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 TTTY13Q9BZ97 58 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 U3KQK5 164 aa5.78□□□□□ -1.48
CTNND1-233ENST00000532787 ODF3BA8MYP8 253 aa5.77□□□□□ -1.49
CTNND1-233ENST00000532787 SPTAN1Q13813 2472 aaKnown RBP5.77□□□□□ -1.49
CTNND1-233ENST00000532787 PCNX2A6NKB5 2137 aa5.77□□□□□ -1.49
CTNND1-233ENST00000532787 SDIM1Q6ZPB5 146 aa5.77□□□□□ -1.49
CTNND1-233ENST00000532787 MAP6D1Q9H9H5 199 aa5.77□□□□□ -1.49
CTNND1-233ENST00000532787 CACNA1BQ00975 2339 aa5.77□□□□□ -1.49
CTNND1-233ENST00000532787 HEATR5AQ86XA9 2040 aa5.77□□□□□ -1.49
CTNND1-233ENST00000532787 NCKAP5O14513 1909 aa5.77□□□□□ -1.49
CTNND1-233ENST00000532787 H0Y9J4 135 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 VPREB1P12018 145 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 USP17L23D6RBM5 183 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 TNFRSF13BO14836 293 aaPredicted RBP5.76□□□□□ -1.49
CTNND1-233ENST00000532787 MBD6Q96DN6 1003 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 KLK12Q9UKR0 248 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 TP73-AS1Q9UF72 201 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 SMIM26A0A096LP01 95 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 MUC7Q8TAX7 377 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 PYGO1Q9Y3Y4 419 aa5.76□□□□□ -1.49
CTNND1-233ENST00000532787 HELZP42694 1942 aaKnown RBP5.75□□□□□ -1.49
CTNND1-233ENST00000532787 EML6Q6ZMW3 1958 aa5.75□□□□□ -1.49
CTNND1-233ENST00000532787 IGF1P05019 195 aa5.75□□□□□ -1.49
CTNND1-233ENST00000532787 IGKV4-1P06312 121 aa5.75□□□□□ -1.49
CTNND1-233ENST00000532787 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
CTNND1-233ENST00000532787 GRNP28799 593 aaKnown RBP5.75□□□□□ -1.49
CTNND1-233ENST00000532787 ADORA2A-AS1P86434 159 aa5.75□□□□□ -1.49
CTNND1-233ENST00000532787 SMAD5-AS1Q9Y6J3 95 aa5.75□□□□□ -1.49
CTNND1-233ENST00000532787 IGKV2D-26A0A0A0MRZ7 120 aa5.75□□□□□ -1.49
CTNND1-233ENST00000532787 FER1L5A0AVI2 2057 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms